RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 FSIP1Q8NA03 581 aa10.8□□□□□ -0.68
HMGCLL1-206ENST00000428842 CREBZFQ9NS37 354 aa10.8□□□□□ -0.68
HMGCLL1-206ENST00000428842 CFAP45Q9UL16 551 aa10.8□□□□□ -0.68
HMGCLL1-206ENST00000428842 EYSQ5T1H1 3165 aa10.8□□□□□ -0.68
HMGCLL1-206ENST00000428842 IGLV3-22A0A075B6J6 115 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 TMEM150BA6NC51 233 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 MSH4O15457 936 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 SP2Q02086 613 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 KARSQ15046 597 aaKnown RBP10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 ECM1Q16610 540 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 SEPT14Q6ZU15 432 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 SYMPKQ92797 1274 aaKnown RBP10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 PXMP2Q9NR77 195 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 PCDH10Q9P2E7 1040 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 GOLGA6L4A6NEF3 574 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 PFKFB1P16118 471 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 SREBF1P36956 1147 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 CYP4A11Q02928 519 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 GPR142Q7Z601 462 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 RIOX2Q8IUF8 465 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 FBXO16Q8IX29 292 aaPredicted RBP10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 COPS5Q92905 334 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 PDCD2LQ9BRP1 358 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 SCAND2PQ9GZW5 306 aaPredicted RBP10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 TTC12Q9H892 705 aaPredicted RBP10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 FLRT1Q9NZU1 646 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 RABGAP1Q9Y3P9 1069 aa10.79□□□□□ -0.68
HMGCLL1-206ENST00000428842 MEIS1O00470 390 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 NR3C2P08235 984 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 ATP2C1P98194 919 aaPredicted RBP10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 SEMA3FQ13275 785 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 SNW1Q13573 536 aaKnown RBP10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 CALCRLQ16602 461 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 PPP1R18Q6NYC8 613 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 NPLOC4Q8TAT6 608 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 MMP19Q99542 508 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 NOL7Q9UMY1 257 aaKnown RBP10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 GABRQQ9UN88 632 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 MANSC4A6NHS7 340 aaPredicted RBP10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 RASSF10A6NK89 507 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 PIK3CDO00329 1044 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 EML1O00423 815 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 TLR2O60603 784 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 CYP2B6P20813 491 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 ITGB3BPQ13352 177 aaPredicted RBP10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 LONRF3Q496Y0 759 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 CCDC102AQ96A19 550 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 PARK7Q99497 189 aaKnown RBP10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 KCNH7Q9NS40 1196 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 BMP2KQ9NSY1 1161 aaPredicted RBP10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 RGL1Q9NZL6 768 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 PLXNB2O15031 1838 aa10.78□□□□□ -0.68
HMGCLL1-206ENST00000428842 POTEB2H3BUK9 544 aa10.77□□□□□ -0.68
HMGCLL1-206ENST00000428842 hCG_1984214I3L0E3 225 aa10.77□□□□□ -0.68
HMGCLL1-206ENST00000428842 POLR2DO15514 142 aaKnown RBP10.77□□□□□ -0.68
HMGCLL1-206ENST00000428842 ARIH2O95376 493 aa10.77□□□□□ -0.68
HMGCLL1-206ENST00000428842 RAD51AP2Q09MP3 1159 aa10.77□□□□□ -0.68
HMGCLL1-206ENST00000428842 TRIM32Q13049 653 aa10.77□□□□□ -0.68
HMGCLL1-206ENST00000428842 LY6KQ17RY6 165 aa10.77□□□□□ -0.68
HMGCLL1-206ENST00000428842 KCNK18Q7Z418 384 aa10.77□□□□□ -0.68
HMGCLL1-206ENST00000428842 PLA2G4DQ86XP0 818 aa10.77□□□□□ -0.68
HMGCLL1-206ENST00000428842 ZNF713Q8N859 430 aaPredicted RBP10.77□□□□□ -0.68
HMGCLL1-206ENST00000428842 KRI1Q8N9T8 703 aaKnown RBP10.77□□□□□ -0.68
HMGCLL1-206ENST00000428842 MTMR9Q96QG7 549 aa10.77□□□□□ -0.68
HMGCLL1-206ENST00000428842 PNMA3Q9UL41 463 aa10.77□□□□□ -0.68
HMGCLL1-206ENST00000428842 CASP8AP2Q9UKL3 1982 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 SYCE3A1L190 88 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 ATP2A1O14983 1001 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 ADCY6O43306 1168 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 MARCH6O60337 910 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 BCRP11274 1271 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 PTPREP23469 700 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 CYP2C19P33261 490 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 CLCN1P35523 988 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 PABPC4Q13310 644 aaKnown RBP eCLIP10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 KCTD2Q14681 263 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 GALNT17Q6IS24 598 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 C17orf99Q6UX52 265 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 ETNPPLQ8TBG4 499 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 DHX58Q96C10 678 aa10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 MMTAG2Q9BU76 263 aaKnown RBP10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 WRAP73Q9P2S5 460 aaPredicted RBP10.77□□□□□ -0.69
HMGCLL1-206ENST00000428842 BIN1O00499 593 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 YEATS4O95619 227 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 OR52Z1P0C646 297 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 PRR29P0C7W0 189 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 FCER1AP12319 257 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 AFMP43652 599 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 ALDH5A1P51649 535 aaPredicted RBP10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 UBE2HP62256 183 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 TKFCQ3LXA3 575 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 CEP55Q53EZ4 464 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 NCAPH2Q6IBW4 605 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 TRIM47Q96LD4 638 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 RNF186Q9NXI6 227 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 PLXNA1Q9UIW2 1896 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 ADGRA2Q96PE1 1338 aa10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 RBBP6Q7Z6E9 1792 aaKnown RBP10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.76□□□□□ -0.69
HMGCLL1-206ENST00000428842 TM4SF4P48230 202 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms