RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 RUNDC3BQ96NL0 473 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 CROCC2H7BZ55 1655 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 RIMBP3CA6NJZ7 1639 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 RIMBP3BA6NNM3 1639 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 RIMBP3Q9UFD9 1639 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 SEMA3EO15041 775 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 MAP3K7O43318 606 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 KPNA2P52292 529 aaKnown RBP9.73□□□□□ -0.85
CTNND1-208ENST00000428599 DCLK2Q8N568 766 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 RNF217Q8TC41 542 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 SLC7A3Q8WY07 619 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 RPGRIP1Q96KN7 1286 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 SLC38A10Q9HBR0 1119 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 SMYD2Q9NRG4 433 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 THAP12O43422 761 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 FGAP02671 866 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 CTNNA1P35221 906 aaKnown RBP9.73□□□□□ -0.85
CTNND1-208ENST00000428599 PPARGP37231 505 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-208ENST00000428599 ELMOD1Q8N336 334 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 TRIM58Q8NG06 486 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 TNKSO95271 1327 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 MMP10P09238 476 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 EPHB1P54762 984 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 PDE1BQ01064 536 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 LMNB2Q03252 620 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 SUSD4Q5VX71 490 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 TTC30AQ86WT1 665 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 PNMA1Q8ND90 353 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 ZNF526Q8TF50 670 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-208ENST00000428599 CCDC124Q96CT7 223 aaKnown RBP9.73□□□□□ -0.85
CTNND1-208ENST00000428599 SPDL1Q96EA4 605 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 TRIM11Q96F44 468 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 GPR108Q9NPR9 543 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 PCDHB4Q9Y5E5 795 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 TULP4Q9NRJ4 1543 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 GNGT2O14610 69 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 OR52Z1P0C646 297 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 CCND2P30279 289 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 UBE3CQ15386 1083 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 NLRP7Q8WX94 980 aa9.73□□□□□ -0.85
CTNND1-208ENST00000428599 DDX41Q9UJV9 622 aaKnown RBP9.73□□□□□ -0.85
CTNND1-208ENST00000428599 KCNK3O14649 394 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 CLNS1AP54105 237 aaKnown RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 YWHAGP61981 247 aaKnown RBP eCLIP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 NOP14P78316 857 aaKnown RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 THOC5Q13769 683 aaKnown RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 PPP1R2P3Q6NXS1 205 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 KRBA2Q6ZNG9 492 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 CCDC127Q96BQ5 260 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 TM6SF1Q9BZW5 370 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 TSPYL2Q9H2G4 693 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 ZNF148Q9UQR1 794 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 FNDC3AQ9Y2H6 1198 aaKnown RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 CAMSAP1Q5T5Y3 1602 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 HNRNPCL2B2RXH8 293 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 GSTA4O15217 222 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 HNRNPCL1O60812 293 aaKnown RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 KAZNQ674X7 775 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 TTBK2Q6IQ55 1244 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 FASTKD5Q7L8L6 764 aaKnown RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 NCAPD2Q15021 1401 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 HNRNPDLO14979 420 aaKnown RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 RPS6KA4O75676 772 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 SLC4A1P02730 911 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 MUM1Q2TAK8 710 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 TRMT2AQ8IZ69 625 aaKnown RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 FAM149B1Q96BN6 582 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 SOS2Q07890 1332 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 KCNJ18B7U540 433 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 GOLGA8HP0CJ92 632 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 SETSIPP0DME0 302 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 IREB2P48200 963 aaKnown RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 FBXW4P57775 412 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 KCNJ12Q14500 433 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 TSC1Q92574 1164 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 FAM81BQ96LP2 452 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 RASSF4Q9H2L5 321 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 ATG3Q9NT62 314 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 SPECC1L-ADORA2AF8WAN1 911 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 INO80B-WBP1J3KQ70 363 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 ARL4AP40617 200 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 MYL7Q01449 175 aa9.72□□□□□ -0.85
CTNND1-208ENST00000428599 PDCD2Q16342 344 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 N4BP2L2Q92802 583 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 INO80BQ9C086 356 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-208ENST00000428599 RAD17O75943 681 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 DDAH1O94760 285 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 MYO1EQ12965 1108 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 ME3Q16798 604 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 RNF219Q5W0B1 726 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-208ENST00000428599 RNF139Q8WU17 664 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 CDHR1Q96JP9 859 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 NT5C1BQ96P26 610 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 GBP5Q96PP8 586 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 CARD6Q9BX69 1037 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 SUCLA2Q9P2R7 463 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-208ENST00000428599 SERTAD1Q9UHV2 236 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 PCDHA1Q9Y5I3 950 aa9.71□□□□□ -0.85
CTNND1-208ENST00000428599 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms