RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 KCNQ1P51787 676 aa19.34■□□□□ 0.69
VARS-216ENST00000428445 TAP1Q03518 808 aa19.34■□□□□ 0.69
VARS-216ENST00000428445 IQCA1Q86XH1 822 aa19.34■□□□□ 0.69
VARS-216ENST00000428445 HERC6Q8IVU3 1022 aa19.34■□□□□ 0.69
VARS-216ENST00000428445 ANKS1AQ92625 1134 aa19.34■□□□□ 0.69
VARS-216ENST00000428445 ALG1Q9BT22 464 aa19.34■□□□□ 0.69
VARS-216ENST00000428445 IL25Q9H293 177 aa19.34■□□□□ 0.69
VARS-216ENST00000428445 LAMA4Q16363 1823 aa19.34■□□□□ 0.69
VARS-216ENST00000428445 B4DLN1 442 aa19.33■□□□□ 0.68
VARS-216ENST00000428445 PITPNM1O00562 1244 aa19.33■□□□□ 0.68
VARS-216ENST00000428445 CFBP00751 764 aa19.33■□□□□ 0.68
VARS-216ENST00000428445 COL9A1P20849 921 aa19.33■□□□□ 0.68
VARS-216ENST00000428445 RFC2P35250 354 aa19.33■□□□□ 0.68
VARS-216ENST00000428445 MRPL12P52815 198 aaKnown RBP19.33■□□□□ 0.68
VARS-216ENST00000428445 MFAP1P55081 439 aaKnown RBP19.33■□□□□ 0.68
VARS-216ENST00000428445 PTPN11Q06124 597 aaPredicted RBP19.33■□□□□ 0.68
VARS-216ENST00000428445 BFSP2Q13515 415 aa19.33■□□□□ 0.68
VARS-216ENST00000428445 STXBP2Q15833 593 aa19.33■□□□□ 0.68
VARS-216ENST00000428445 ARHGEF16Q5VV41 709 aa19.33■□□□□ 0.68
VARS-216ENST00000428445 FBXO11Q86XK2 927 aa19.33■□□□□ 0.68
VARS-216ENST00000428445 NSUN6Q8TEA1 469 aaKnown RBP19.33■□□□□ 0.68
VARS-216ENST00000428445 DDX41Q9UJV9 622 aaKnown RBP19.33■□□□□ 0.68
VARS-216ENST00000428445 LCHNA4D1U4 455 aa19.32■□□□□ 0.68
VARS-216ENST00000428445 OPLAHO14841 1288 aa19.32■□□□□ 0.68
VARS-216ENST00000428445 PARP1P09874 1014 aaKnown RBP19.32■□□□□ 0.68
VARS-216ENST00000428445 BMP1P13497 986 aa19.32■□□□□ 0.68
VARS-216ENST00000428445 NT5C2P49902 561 aa19.32■□□□□ 0.68
VARS-216ENST00000428445 ZNF200P98182 395 aaPredicted RBP19.32■□□□□ 0.68
VARS-216ENST00000428445 NUCB1Q02818 461 aa19.32■□□□□ 0.68
VARS-216ENST00000428445 SLC9A7Q96T83 725 aa19.32■□□□□ 0.68
VARS-216ENST00000428445 RWDD1Q9H446 243 aaPredicted RBP19.32■□□□□ 0.68
VARS-216ENST00000428445 DIAPH3Q9NSV4 1193 aa19.32■□□□□ 0.68
VARS-216ENST00000428445 HDAC6Q9UBN7 1215 aa19.32■□□□□ 0.68
VARS-216ENST00000428445 PPP1R11O60927 126 aaPredicted RBP19.31■□□□□ 0.68
VARS-216ENST00000428445 ZNF286BP0CG31 522 aa19.31■□□□□ 0.68
VARS-216ENST00000428445 DEFB103AP81534 67 aa19.31■□□□□ 0.68
VARS-216ENST00000428445 HIC1Q14526 733 aa19.31■□□□□ 0.68
VARS-216ENST00000428445 ASPRV1Q53RT3 343 aa19.31■□□□□ 0.68
VARS-216ENST00000428445 IL27Q8NEV9 243 aa19.31■□□□□ 0.68
VARS-216ENST00000428445 EXOC6Q8TAG9 804 aa19.31■□□□□ 0.68
VARS-216ENST00000428445 PHOSPHO2Q8TCD6 241 aa19.31■□□□□ 0.68
VARS-216ENST00000428445 WNT8BQ93098 351 aa19.31■□□□□ 0.68
VARS-216ENST00000428445 OSBPL3Q9H4L5 887 aa19.31■□□□□ 0.68
VARS-216ENST00000428445 PXMP2Q9NR77 195 aa19.31■□□□□ 0.68
VARS-216ENST00000428445 MRPL11Q9Y3B7 192 aaKnown RBP19.31■□□□□ 0.68
VARS-216ENST00000428445 BAZ2BQ9UIF8 2168 aaKnown RBP19.3■□□□□ 0.68
VARS-216ENST00000428445 NBNO60934 754 aa19.3■□□□□ 0.68
VARS-216ENST00000428445 NR3C2P08235 984 aa19.3■□□□□ 0.68
VARS-216ENST00000428445 MYCLP12524 364 aaPredicted RBP19.3■□□□□ 0.68
VARS-216ENST00000428445 CASTP20810 708 aaKnown RBP19.3■□□□□ 0.68
VARS-216ENST00000428445 PSEN2P49810 448 aa19.3■□□□□ 0.68
VARS-216ENST00000428445 CYB5R4Q7L1T6 521 aa19.3■□□□□ 0.68
VARS-216ENST00000428445 MCF2L2Q86YR7 1114 aa19.3■□□□□ 0.68
VARS-216ENST00000428445 IWS1Q96ST2 819 aa19.3■□□□□ 0.68
VARS-216ENST00000428445 TSPYL2Q9H2G4 693 aaPredicted RBP19.3■□□□□ 0.68
VARS-216ENST00000428445 TLL1O43897 1013 aa19.29■□□□□ 0.68
VARS-216ENST00000428445 RGS20O76081 388 aa19.29■□□□□ 0.68
VARS-216ENST00000428445 CKBP12277 381 aa19.29■□□□□ 0.68
VARS-216ENST00000428445 HOXA13P31271 388 aaPredicted RBP19.29■□□□□ 0.68
VARS-216ENST00000428445 WDR5P61964 334 aaKnown RBP19.29■□□□□ 0.68
VARS-216ENST00000428445 GRB10Q13322 594 aa19.29■□□□□ 0.68
VARS-216ENST00000428445 DGKDQ16760 1214 aa19.29■□□□□ 0.68
VARS-216ENST00000428445 IMMTQ16891 758 aaKnown RBP19.29■□□□□ 0.68
VARS-216ENST00000428445 SLC35G1Q2M3R5 365 aa19.29■□□□□ 0.68
VARS-216ENST00000428445 CCDC178Q5BJE1 867 aa19.29■□□□□ 0.68
VARS-216ENST00000428445 LRRC8DQ7L1W4 858 aa19.29■□□□□ 0.68
VARS-216ENST00000428445 SESTD1Q86VW0 696 aa19.29■□□□□ 0.68
VARS-216ENST00000428445 GPKOWQ92917 476 aaPredicted RBP eCLIP19.29■□□□□ 0.68
VARS-216ENST00000428445 YTHDC1Q96MU7 727 aaKnown RBP19.29■□□□□ 0.68
VARS-216ENST00000428445 DSCC1Q9BVC3 393 aa19.29■□□□□ 0.68
VARS-216ENST00000428445 GTF2IRD1Q9UHL9 959 aa19.29■□□□□ 0.68
VARS-216ENST00000428445 MRVI1Q9Y6F6 885 aa19.29■□□□□ 0.68
VARS-216ENST00000428445 NCOR1O75376 2440 aa19.28■□□□□ 0.68
VARS-216ENST00000428445 KIF28PB7ZC32 967 aa19.28■□□□□ 0.68
VARS-216ENST00000428445 GTPBP6O43824 516 aaPredicted RBP19.28■□□□□ 0.68
VARS-216ENST00000428445 LPXNO60711 386 aa19.28■□□□□ 0.68
VARS-216ENST00000428445 EIF3JO75822 258 aaKnown RBP19.28■□□□□ 0.68
VARS-216ENST00000428445 SELPP16109 830 aa19.28■□□□□ 0.68
VARS-216ENST00000428445 POU3F3P20264 500 aaPredicted RBP19.28■□□□□ 0.68
VARS-216ENST00000428445 MFSD10Q14728 455 aa19.28■□□□□ 0.68
VARS-216ENST00000428445 FAM117BQ6P1L5 589 aa19.28■□□□□ 0.68
VARS-216ENST00000428445 DHX37Q8IY37 1157 aaKnown RBP19.28■□□□□ 0.68
VARS-216ENST00000428445 C7orf31Q8N865 590 aa19.28■□□□□ 0.68
VARS-216ENST00000428445 IL31RAQ8NI17 732 aa19.28■□□□□ 0.68
VARS-216ENST00000428445 CAGE1Q8TC20 777 aa19.28■□□□□ 0.68
VARS-216ENST00000428445 AFAP1L1Q8TED9 768 aa19.28■□□□□ 0.68
VARS-216ENST00000428445 BCAS3Q9H6U6 928 aa19.28■□□□□ 0.68
VARS-216ENST00000428445 SENP2Q9HC62 589 aa19.28■□□□□ 0.68
VARS-216ENST00000428445 KLRF2D3W0D1 207 aa19.27■□□□□ 0.68
VARS-216ENST00000428445 KCNJ6P48051 423 aa19.27■□□□□ 0.68
VARS-216ENST00000428445 HSD17B4P51659 736 aa19.27■□□□□ 0.68
VARS-216ENST00000428445 SP2Q02086 613 aa19.27■□□□□ 0.68
VARS-216ENST00000428445 SEC23AQ15436 765 aa19.27■□□□□ 0.68
VARS-216ENST00000428445 KIAA0753Q2KHM9 967 aa19.27■□□□□ 0.68
VARS-216ENST00000428445 IFIT1BQ5T764 474 aaKnown RBP19.27■□□□□ 0.68
VARS-216ENST00000428445 UBAC1Q9BSL1 405 aa19.27■□□□□ 0.68
VARS-216ENST00000428445 ZBED2Q9BTP6 218 aa19.27■□□□□ 0.68
VARS-216ENST00000428445 AMNQ9BXJ7 453 aa19.27■□□□□ 0.68
VARS-216ENST00000428445 KRT23Q9C075 422 aa19.27■□□□□ 0.68
VARS-216ENST00000428445 MAF1Q9H063 256 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms