RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 MICALL1Q8N3F8 863 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 GPATCH11Q8N954 259 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 ANKRD42Q8N9B4 389 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 LARP4BQ92615 738 aaKnown RBP10.66□□□□□ -0.7
SNX13-203ENST00000428135 RAB20Q9NX57 234 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 AMFRQ9UKV5 643 aa10.66□□□□□ -0.7
SNX13-203ENST00000428135 NR2F2P24468 414 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 SND1Q7KZF4 910 aaKnown RBP eCLIP10.65□□□□□ -0.7
SNX13-203ENST00000428135 NBPF26B4DH59 902 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 RIOK3O14730 519 aaKnown RBP10.65□□□□□ -0.7
SNX13-203ENST00000428135 IGKV5-2P06315 115 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 YWHAEP62258 255 aaKnown RBP10.65□□□□□ -0.7
SNX13-203ENST00000428135 NBPF10Q6P3W6 841 aaKnown RBP10.65□□□□□ -0.7
SNX13-203ENST00000428135 CLEC4GQ6UXB4 293 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 CCDC84Q86UT8 332 aaPredicted RBP10.65□□□□□ -0.7
SNX13-203ENST00000428135 VPS52Q8N1B4 723 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 NBPF15Q8N660 670 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 RETREG2Q8NC44 543 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 FAM76AQ8TAV0 307 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 CNOT6LQ96LI5 555 aaKnown RBP10.65□□□□□ -0.7
SNX13-203ENST00000428135 ZBED2Q9BTP6 218 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 SAMD15Q9P1V8 674 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 RIPOR2Q9Y4F9 1068 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 STK25O00506 426 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 TFDP1Q14186 410 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 FBXO18Q8NFZ0 1043 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 ATP6V0A1Q93050 837 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 ABCF3Q9NUQ8 709 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 MNAT1P51948 309 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 SPP2Q13103 211 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 MESDQ14696 234 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 RNF207Q6ZRF8 634 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 RSPH3Q86UC2 560 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 CD209Q9NNX6 404 aa10.65□□□□□ -0.7
SNX13-203ENST00000428135 GNA14O95837 355 aa10.65□□□□□ -0.71
SNX13-203ENST00000428135 BANK1Q8NDB2 785 aa10.65□□□□□ -0.71
SNX13-203ENST00000428135 NSUN7Q8NE18 718 aaKnown RBP10.65□□□□□ -0.71
SNX13-203ENST00000428135 CALCOCO1Q9P1Z2 691 aa10.65□□□□□ -0.71
SNX13-203ENST00000428135 FAM184BQ9ULE4 1060 aa10.65□□□□□ -0.71
SNX13-203ENST00000428135 PCDHB6Q9Y5E3 794 aa10.65□□□□□ -0.71
SNX13-203ENST00000428135 CYP2E1P05181 493 aaPredicted RBP10.64□□□□□ -0.71
SNX13-203ENST00000428135 PPP2R5AQ15172 486 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 EXOC3L4Q17RC7 722 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 COL23A1Q86Y22 540 aaPredicted RBP10.64□□□□□ -0.71
SNX13-203ENST00000428135 SIRT2Q8IXJ6 389 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 TIGD1Q96MW7 591 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 DHX36Q9H2U1 1008 aaKnown RBP10.64□□□□□ -0.71
SNX13-203ENST00000428135 KIF24Q5T7B8 1368 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 SH2B2O14492 632 aaPredicted RBP10.64□□□□□ -0.71
SNX13-203ENST00000428135 GTPBP6O43824 516 aaPredicted RBP10.64□□□□□ -0.71
SNX13-203ENST00000428135 FOSP01100 380 aaPredicted RBP10.64□□□□□ -0.71
SNX13-203ENST00000428135 SLC12A2P55011 1212 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 DYNLT1P63172 113 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 PRR5LQ6MZQ0 368 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 CEP57Q86XR8 500 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 TTC30BQ8N4P2 665 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 ANKRD36BP1Q96IX9 119 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.64□□□□□ -0.71
SNX13-203ENST00000428135 ADAMTS13Q76LX8 1427 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 RASSF7Q02833 373 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 INTS8Q75QN2 995 aaKnown RBP10.64□□□□□ -0.71
SNX13-203ENST00000428135 HDXQ7Z353 690 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 SNX25Q9H3E2 840 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 ANAPC4Q9UJX5 808 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 ABCB11O95342 1321 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 USP17L15C9J2P7 530 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 USP17L13C9JLJ4 530 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 USP17L11C9JVI0 530 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 USP17L18D6R9N7 530 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 USP17L22D6RA61 530 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 USP17L17D6RBQ6 530 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 USP17L19D6RCP7 530 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 USP17L20D6RJB6 530 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 CMA1P23946 247 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 ADCY8P40145 1251 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 USP17L24Q0WX57 530 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 USP17L6PQ6QN14 398 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 TMC4Q7Z404 712 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 PALM2Q8IXS6 379 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 MICALL2Q8IY33 904 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 PCDHA5Q9Y5H7 936 aa10.64□□□□□ -0.71
SNX13-203ENST00000428135 LONP1P36776 959 aaKnown RBP10.63□□□□□ -0.71
SNX13-203ENST00000428135 ZNF131P52739 623 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 SNX1Q13596 522 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 TSC1Q92574 1164 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 NEDD4P46934 1319 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 IFT20Q8IY31 132 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 GPT2Q8TD30 523 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 EPSTI1Q96J88 318 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 H7C0C1 242 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 KRIT1O00522 736 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 ATP5OP48047 213 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 SETDB1Q15047 1291 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 CFAP221Q4G0U5 840 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 ZNF394Q53GI3 561 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 SNRNP48Q6IEG0 339 aaKnown RBP10.63□□□□□ -0.71
SNX13-203ENST00000428135 SYCE1Q8N0S2 351 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 OR8K1Q8NGG5 319 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 KRT12Q99456 494 aa10.63□□□□□ -0.71
SNX13-203ENST00000428135 MAD1L1Q9Y6D9 718 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms