RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 LRIT3Q3SXY7 679 aa23.82■■□□□ 1.4
HSPG2-205ENST00000427897 CCDC62Q6P9F0 684 aa23.82■■□□□ 1.4
HSPG2-205ENST00000427897 FAM126BQ8IXS8 530 aa23.82■■□□□ 1.4
HSPG2-205ENST00000427897 DHX37Q8IY37 1157 aaKnown RBP23.82■■□□□ 1.4
HSPG2-205ENST00000427897 LRCH3Q96II8 777 aa23.82■■□□□ 1.4
HSPG2-205ENST00000427897 PPP1R12CQ9BZL4 782 aa23.82■■□□□ 1.4
HSPG2-205ENST00000427897 LTBP2Q14767 1821 aa23.82■■□□□ 1.4
HSPG2-205ENST00000427897 A6NJR5 290 aa23.81■■□□□ 1.4
HSPG2-205ENST00000427897 VSIG10LQ86VR7 867 aa23.81■■□□□ 1.4
HSPG2-205ENST00000427897 TMEM199Q8N511 208 aa23.81■■□□□ 1.4
HSPG2-205ENST00000427897 SNX14Q9Y5W7 946 aa23.81■■□□□ 1.4
HSPG2-205ENST00000427897 KIAA1217Q5T5P2 1943 aa23.8■■□□□ 1.4
HSPG2-205ENST00000427897 hCG_1642624A0A1W2PR95 340 aa23.8■■□□□ 1.4
HSPG2-205ENST00000427897 GOLGA8AA7E2F4 631 aa23.8■■□□□ 1.4
HSPG2-205ENST00000427897 GOLGA8BA8MQT2 603 aa23.8■■□□□ 1.4
HSPG2-205ENST00000427897 SOX1O00570 391 aaPredicted RBP23.8■■□□□ 1.4
HSPG2-205ENST00000427897 SUPT20HL2P0C7V6 817 aa23.8■■□□□ 1.4
HSPG2-205ENST00000427897 CASTP20810 708 aaKnown RBP23.8■■□□□ 1.4
HSPG2-205ENST00000427897 SHHQ15465 462 aa23.8■■□□□ 1.4
HSPG2-205ENST00000427897 GNPTABQ3T906 1256 aa23.8■■□□□ 1.4
HSPG2-205ENST00000427897 TMTC3Q6ZXV5 915 aa23.8■■□□□ 1.4
HSPG2-205ENST00000427897 HEATR3Q7Z4Q2 680 aa23.8■■□□□ 1.4
HSPG2-205ENST00000427897 SLC43A3Q8NBI5 491 aa23.8■■□□□ 1.4
HSPG2-205ENST00000427897 AFG1LQ8WV93 481 aa23.8■■□□□ 1.4
HSPG2-205ENST00000427897 PSTPIP2Q9H939 334 aa23.8■■□□□ 1.4
HSPG2-205ENST00000427897 DDX41Q9UJV9 622 aaKnown RBP23.8■■□□□ 1.4
HSPG2-205ENST00000427897 ITGB8P26012 769 aa23.79■■□□□ 1.4
HSPG2-205ENST00000427897 LAMC2Q13753 1193 aa23.79■■□□□ 1.4
HSPG2-205ENST00000427897 Q6ZUG5 572 aa23.79■■□□□ 1.4
HSPG2-205ENST00000427897 ZFP91Q96JP5 570 aaPredicted RBP23.79■■□□□ 1.4
HSPG2-205ENST00000427897 TBX21Q9UL17 535 aa23.79■■□□□ 1.4
HSPG2-205ENST00000427897 BRPF3Q9ULD4 1205 aa23.79■■□□□ 1.4
HSPG2-205ENST00000427897 CD4P01730 458 aa23.78■■□□□ 1.4
HSPG2-205ENST00000427897 CPA1P15085 419 aa23.78■■□□□ 1.4
HSPG2-205ENST00000427897 ARHGAP1Q07960 439 aa23.78■■□□□ 1.4
HSPG2-205ENST00000427897 PPIGQ13427 754 aaKnown RBP eCLIP23.78■■□□□ 1.41e-6■■■□□ 16.9
HSPG2-205ENST00000427897 DGKDQ16760 1214 aa23.78■■□□□ 1.4
HSPG2-205ENST00000427897 MFSD5Q6N075 450 aa23.78■■□□□ 1.4
HSPG2-205ENST00000427897 USP17L6PQ6QN14 398 aa23.78■■□□□ 1.4
HSPG2-205ENST00000427897 TRPV6Q9H1D0 765 aa23.78■■□□□ 1.4
HSPG2-205ENST00000427897 HIPK3Q9H422 1215 aa23.78■■□□□ 1.4
HSPG2-205ENST00000427897 MLXIPQ9HAP2 919 aa23.78■■□□□ 1.4
HSPG2-205ENST00000427897 GRIN2DO15399 1336 aa23.78■■□□□ 1.4
HSPG2-205ENST00000427897 TRIOBPQ9H2D6 2365 aa23.77■■□□□ 1.4
HSPG2-205ENST00000427897 CCDC196A0A1B0GTZ2 297 aa23.77■■□□□ 1.4
HSPG2-205ENST00000427897 SORBS3O60504 671 aa23.77■■□□□ 1.4
HSPG2-205ENST00000427897 B4GALT4O60513 344 aa23.77■■□□□ 1.4
HSPG2-205ENST00000427897 STAM2O75886 525 aa23.77■■□□□ 1.4
HSPG2-205ENST00000427897 MMP3P08254 477 aa23.77■■□□□ 1.4
HSPG2-205ENST00000427897 TGFB3P10600 412 aa23.77■■□□□ 1.4
HSPG2-205ENST00000427897 NBPF20Q3BBV1 942 aa23.77■■□□□ 1.4
HSPG2-205ENST00000427897 IL31RAQ8NI17 732 aa23.77■■□□□ 1.4
HSPG2-205ENST00000427897 KCNB2Q92953 911 aa23.77■■□□□ 1.4
HSPG2-205ENST00000427897 NOD1Q9Y239 953 aa23.77■■□□□ 1.4
HSPG2-205ENST00000427897 SPDYE3A6NKU9 549 aa23.76■■□□□ 1.39
HSPG2-205ENST00000427897 METAP2P50579 478 aaKnown RBP eCLIP23.76■■□□□ 1.39
HSPG2-205ENST00000427897 APOBRQ0VD83 1088 aa23.76■■□□□ 1.39
HSPG2-205ENST00000427897 C9orf50Q5SZB4 431 aa23.76■■□□□ 1.39
HSPG2-205ENST00000427897 BRF1Q92994 677 aa23.76■■□□□ 1.39
HSPG2-205ENST00000427897 RNPC3Q96LT9 517 aaKnown RBP23.76■■□□□ 1.39
HSPG2-205ENST00000427897 ALDH8A1Q9H2A2 487 aaPredicted RBP23.76■■□□□ 1.39
HSPG2-205ENST00000427897 EHMT1Q9H9B1 1298 aa23.76■■□□□ 1.39
HSPG2-205ENST00000427897 RTEL1Q9NZ71 1219 aa23.76■■□□□ 1.39
HSPG2-205ENST00000427897 V9GY48 417 aaPredicted RBP23.76■■□□□ 1.39
HSPG2-205ENST00000427897 PIK3CDO00329 1044 aa23.75■■□□□ 1.39
HSPG2-205ENST00000427897 EPB41L2O43491 1005 aaKnown RBP23.75■■□□□ 1.39
HSPG2-205ENST00000427897 GGPS1O95749 300 aa23.75■■□□□ 1.39
HSPG2-205ENST00000427897 RPS6KB1P23443 525 aa23.75■■□□□ 1.39
HSPG2-205ENST00000427897 CYP2C18P33260 490 aa23.75■■□□□ 1.39
HSPG2-205ENST00000427897 NAPAP54920 295 aa23.75■■□□□ 1.39
HSPG2-205ENST00000427897 GPKOWQ92917 476 aaPredicted RBP eCLIP23.75■■□□□ 1.39
HSPG2-205ENST00000427897 SPATA33Q96N06 139 aa23.75■■□□□ 1.39
HSPG2-205ENST00000427897 MYH7BA7E2Y1 1941 aa23.74■■□□□ 1.39
HSPG2-205ENST00000427897 MEIS2O14770 477 aa23.74■■□□□ 1.39
HSPG2-205ENST00000427897 NFRKBQ6P4R8 1299 aa23.74■■□□□ 1.39
HSPG2-205ENST00000427897 NLRX1Q86UT6 975 aa23.74■■□□□ 1.39
HSPG2-205ENST00000427897 KATNAL1Q9BW62 490 aa23.74■■□□□ 1.39
HSPG2-205ENST00000427897 CSF2RAP15509 400 aa23.73■■□□□ 1.39
HSPG2-205ENST00000427897 RCAN1P53805 252 aa23.73■■□□□ 1.39
HSPG2-205ENST00000427897 CCL23P55773 120 aa23.73■■□□□ 1.39
HSPG2-205ENST00000427897 AKAP17AQ02040 695 aaKnown RBP23.73■■□□□ 1.39
HSPG2-205ENST00000427897 PTPN11Q06124 597 aaPredicted RBP23.73■■□□□ 1.39
HSPG2-205ENST00000427897 CELF3Q5SZQ8 465 aaKnown RBP23.73■■□□□ 1.39
HSPG2-205ENST00000427897 GPR153Q6NV75 609 aa23.73■■□□□ 1.39
HSPG2-205ENST00000427897 XRRA1Q6P2D8 792 aa23.73■■□□□ 1.39
HSPG2-205ENST00000427897 PPTC7Q8NI37 304 aa23.73■■□□□ 1.39
HSPG2-205ENST00000427897 PPP1R13LQ8WUF5 828 aa23.73■■□□□ 1.39
HSPG2-205ENST00000427897 EMID1Q96A84 441 aaPredicted RBP23.73■■□□□ 1.39
HSPG2-205ENST00000427897 TRMT13Q9NUP7 481 aaKnown RBP23.73■■□□□ 1.39
HSPG2-205ENST00000427897 NOP56O00567 594 aaKnown RBP23.72■■□□□ 1.39
HSPG2-205ENST00000427897 FIBPO43427 364 aa23.72■■□□□ 1.39
HSPG2-205ENST00000427897 RGS20O76081 388 aa23.72■■□□□ 1.39
HSPG2-205ENST00000427897 EPHB4P54760 987 aa23.72■■□□□ 1.39
HSPG2-205ENST00000427897 NEDD9Q14511 834 aa23.72■■□□□ 1.39
HSPG2-205ENST00000427897 UBE2SQ16763 222 aa23.72■■□□□ 1.39
HSPG2-205ENST00000427897 PCNX4Q63HM2 1172 aa23.72■■□□□ 1.39
HSPG2-205ENST00000427897 DEFB123Q8N688 67 aa23.72■■□□□ 1.39
HSPG2-205ENST00000427897 C7orf31Q8N865 590 aa23.72■■□□□ 1.39
HSPG2-205ENST00000427897 RETREG2Q8NC44 543 aa23.72■■□□□ 1.39
HSPG2-205ENST00000427897 ALG1Q9BT22 464 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms