RNA–Protein interactions for RNA: ENST00000427746.1

HLCS-204, Transcript of holocarboxylase synthetase, humanhuman

TSL 3

Gene HLCS, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-204ENST00000427746 C16orf59Q7L2K0 433 aa22.36■■□□□ 1.17
HLCS-204ENST00000427746 DHX32Q7L7V1 743 aaKnown RBP22.36■■□□□ 1.17
HLCS-204ENST00000427746 CMTR1Q8N1G2 835 aaKnown RBP22.36■■□□□ 1.17
HLCS-204ENST00000427746 FANCBQ8NB91 859 aa22.36■■□□□ 1.17
HLCS-204ENST00000427746 AFG1LQ8WV93 481 aa22.36■■□□□ 1.17
HLCS-204ENST00000427746 EMID1Q96A84 441 aaPredicted RBP22.36■■□□□ 1.17
HLCS-204ENST00000427746 MMP3P08254 477 aa22.35■■□□□ 1.17
HLCS-204ENST00000427746 MYCLP12524 364 aaPredicted RBP22.35■■□□□ 1.17
HLCS-204ENST00000427746 CSF2RAP15509 400 aa22.35■■□□□ 1.17
HLCS-204ENST00000427746 CYP2C18P33260 490 aa22.35■■□□□ 1.17
HLCS-204ENST00000427746 NBPF20Q3BBV1 942 aa22.35■■□□□ 1.17
HLCS-204ENST00000427746 FAM109BQ6ICB4 259 aaPredicted RBP22.35■■□□□ 1.17
HLCS-204ENST00000427746 FCHSD1Q86WN1 690 aa22.35■■□□□ 1.17
HLCS-204ENST00000427746 RAB11FIP4Q86YS3 637 aa22.35■■□□□ 1.17
HLCS-204ENST00000427746 TMEM199Q8N511 208 aa22.35■■□□□ 1.17
HLCS-204ENST00000427746 KCNB2Q92953 911 aa22.35■■□□□ 1.17
HLCS-204ENST00000427746 NOC4LQ9BVI4 516 aaKnown RBP22.35■■□□□ 1.17
HLCS-204ENST00000427746 HIPK3Q9H422 1215 aa22.35■■□□□ 1.17
HLCS-204ENST00000427746 SEC63Q9UGP8 760 aaKnown RBP22.35■■□□□ 1.17
HLCS-204ENST00000427746 MRVI1Q9Y6F6 885 aa22.35■■□□□ 1.17
HLCS-204ENST00000427746 UMODL1Q5DID0 1318 aa22.34■■□□□ 1.17
HLCS-204ENST00000427746 PPIGQ13427 754 aaKnown RBP eCLIP22.34■■□□□ 1.17
HLCS-204ENST00000427746 KRT32Q14532 448 aa22.34■■□□□ 1.17
HLCS-204ENST00000427746 NFRKBQ6P4R8 1299 aa22.34■■□□□ 1.17
HLCS-204ENST00000427746 APOA5Q6Q788 366 aa22.34■■□□□ 1.17
HLCS-204ENST00000427746 TMTC3Q6ZXV5 915 aa22.34■■□□□ 1.17
HLCS-204ENST00000427746 RNPC3Q96LT9 517 aaKnown RBP22.34■■□□□ 1.17
HLCS-204ENST00000427746 TCEANC2Q96MN5 208 aa22.34■■□□□ 1.17
HLCS-204ENST00000427746 TRMT13Q9NUP7 481 aaKnown RBP22.34■■□□□ 1.17
HLCS-204ENST00000427746 COL6A3P12111 3177 aa22.34■■□□□ 1.17
HLCS-204ENST00000427746 PIK3CDO00329 1044 aa22.33■■□□□ 1.17
HLCS-204ENST00000427746 CCND2P30279 289 aa22.33■■□□□ 1.17
HLCS-204ENST00000427746 SMAD3P84022 425 aaKnown RBP22.33■■□□□ 1.17
HLCS-204ENST00000427746 KCNV1Q6PIU1 500 aa22.33■■□□□ 1.17
HLCS-204ENST00000427746 MICU3Q86XE3 530 aa22.33■■□□□ 1.17
HLCS-204ENST00000427746 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.33■■□□□ 1.17
HLCS-204ENST00000427746 MTMR10Q9NXD2 777 aa22.33■■□□□ 1.17
HLCS-204ENST00000427746 BRPF3Q9ULD4 1205 aa22.33■■□□□ 1.17
HLCS-204ENST00000427746 MEIS2O14770 477 aa22.32■■□□□ 1.16
HLCS-204ENST00000427746 NEFLP07196 543 aa22.32■■□□□ 1.16
HLCS-204ENST00000427746 SUPT20HL2P0C7V6 817 aa22.32■■□□□ 1.16
HLCS-204ENST00000427746 PTPN11Q06124 597 aaPredicted RBP22.32■■□□□ 1.16
HLCS-204ENST00000427746 LAMC2Q13753 1193 aa22.32■■□□□ 1.16
HLCS-204ENST00000427746 TMEM240Q5SV17 173 aa22.32■■□□□ 1.16
HLCS-204ENST00000427746 KAT2BQ92831 832 aa22.32■■□□□ 1.16
HLCS-204ENST00000427746 WNT8AQ9H1J5 351 aa22.32■■□□□ 1.16
HLCS-204ENST00000427746 HMGB1P09429 215 aaKnown RBP22.31■■□□□ 1.16
HLCS-204ENST00000427746 TGFB3P10600 412 aa22.31■■□□□ 1.16
HLCS-204ENST00000427746 HSPA4P34932 840 aa22.31■■□□□ 1.16
HLCS-204ENST00000427746 MRPS9P82933 396 aaKnown RBP22.31■■□□□ 1.16
HLCS-204ENST00000427746 SP2Q02086 613 aa22.31■■□□□ 1.16
HLCS-204ENST00000427746 MYSM1Q5VVJ2 828 aa22.31■■□□□ 1.16
HLCS-204ENST00000427746 USP17L6PQ6QN14 398 aa22.31■■□□□ 1.16
HLCS-204ENST00000427746 SYNE3Q6ZMZ3 975 aa22.31■■□□□ 1.16
HLCS-204ENST00000427746 DHX37Q8IY37 1157 aaKnown RBP22.31■■□□□ 1.16
HLCS-204ENST00000427746 CCDC82Q8N4S0 544 aa22.31■■□□□ 1.16
HLCS-204ENST00000427746 PPTC7Q8NI37 304 aa22.31■■□□□ 1.16
HLCS-204ENST00000427746 PPP1R13LQ8WUF5 828 aa22.31■■□□□ 1.16
HLCS-204ENST00000427746 ZFP91Q96JP5 570 aaPredicted RBP22.31■■□□□ 1.16
HLCS-204ENST00000427746 hCG_1642624A0A1W2PR95 340 aa22.3■■□□□ 1.16
HLCS-204ENST00000427746 CYP2C9P11712 490 aa22.3■■□□□ 1.16
HLCS-204ENST00000427746 HOXD8P13378 290 aaPredicted RBP22.3■■□□□ 1.16
HLCS-204ENST00000427746 CASTP20810 708 aaKnown RBP22.3■■□□□ 1.16
HLCS-204ENST00000427746 DGKDQ16760 1214 aa22.3■■□□□ 1.16
HLCS-204ENST00000427746 FAM47CQ5HY64 1035 aa22.3■■□□□ 1.16
HLCS-204ENST00000427746 CELF3Q5SZQ8 465 aaKnown RBP22.3■■□□□ 1.16
HLCS-204ENST00000427746 RASIP1Q5U651 963 aa22.3■■□□□ 1.16
HLCS-204ENST00000427746 SMARCC2Q8TAQ2 1214 aa22.3■■□□□ 1.16
HLCS-204ENST00000427746 GPKOWQ92917 476 aaPredicted RBP eCLIP22.3■■□□□ 1.16
HLCS-204ENST00000427746 INPP4AQ96PE3 977 aaPredicted RBP22.3■■□□□ 1.16
HLCS-204ENST00000427746 IL23AQ9NPF7 189 aa22.3■■□□□ 1.16
HLCS-204ENST00000427746 STAM2O75886 525 aa22.29■■□□□ 1.16
HLCS-204ENST00000427746 ACRP10323 421 aa22.29■■□□□ 1.16
HLCS-204ENST00000427746 UBA1P22314 1058 aaKnown RBP22.29■■□□□ 1.16
HLCS-204ENST00000427746 CCL23P55773 120 aa22.29■■□□□ 1.16
HLCS-204ENST00000427746 FUT2Q10981 343 aa22.29■■□□□ 1.16
HLCS-204ENST00000427746 PSRC1Q6PGN9 363 aaPredicted RBP22.29■■□□□ 1.16
HLCS-204ENST00000427746 ZNF365Q70YC5 407 aa22.29■■□□□ 1.16
HLCS-204ENST00000427746 SESTD1Q86VW0 696 aa22.29■■□□□ 1.16
HLCS-204ENST00000427746 CUL5Q93034 780 aa22.29■■□□□ 1.16
HLCS-204ENST00000427746 RBM28Q9NW13 759 aaKnown RBP22.29■■□□□ 1.16
HLCS-204ENST00000427746 SNX14Q9Y5W7 946 aa22.29■■□□□ 1.16
HLCS-204ENST00000427746 CNTNAP5Q8WYK1 1306 aa22.29■■□□□ 1.16
HLCS-204ENST00000427746 ZBTB43O43298 467 aa22.28■■□□□ 1.16
HLCS-204ENST00000427746 GGPS1O95749 300 aa22.28■■□□□ 1.16
HLCS-204ENST00000427746 ICAM3P32942 547 aa22.28■■□□□ 1.16
HLCS-204ENST00000427746 HSDL1Q3SXM5 330 aa22.28■■□□□ 1.16
HLCS-204ENST00000427746 VWCEQ96DN2 955 aa22.28■■□□□ 1.16
HLCS-204ENST00000427746 PSTPIP2Q9H939 334 aa22.28■■□□□ 1.16
HLCS-204ENST00000427746 KLF18A0A0U1RQI7 1052 aa22.27■■□□□ 1.16
HLCS-204ENST00000427746 F2P00734 622 aa22.27■■□□□ 1.16
HLCS-204ENST00000427746 CPA1P15085 419 aa22.27■■□□□ 1.16
HLCS-204ENST00000427746 RCAN1P53805 252 aa22.27■■□□□ 1.16
HLCS-204ENST00000427746 RTN1Q16799 776 aa22.27■■□□□ 1.16
HLCS-204ENST00000427746 GNPTABQ3T906 1256 aa22.27■■□□□ 1.16
HLCS-204ENST00000427746 PCNX4Q63HM2 1172 aa22.27■■□□□ 1.16
HLCS-204ENST00000427746 XRRA1Q6P2D8 792 aa22.27■■□□□ 1.16
HLCS-204ENST00000427746 CTAGE1Q96RT6 745 aa22.27■■□□□ 1.16
HLCS-204ENST00000427746 FAM217BQ9NTX9 383 aaPredicted RBP22.27■■□□□ 1.16
HLCS-204ENST00000427746 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms