RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 C6orf50Q9HD87 102 aa28.84■■■□□ 2.21
HERPUD2-205ENST00000427455 VPS54Q9P1Q0 977 aa28.84■■■□□ 2.21
HERPUD2-205ENST00000427455 Q9Y3F1 56 aa28.84■■■□□ 2.21
HERPUD2-205ENST00000427455 NKRFO15226 690 aaKnown RBP eCLIP28.83■■■□□ 2.21
HERPUD2-205ENST00000427455 STAM2O75886 525 aa28.83■■■□□ 2.21
HERPUD2-205ENST00000427455 CTDNEP1O95476 244 aa28.83■■■□□ 2.21
HERPUD2-205ENST00000427455 COL6A1P12109 1028 aa28.83■■■□□ 2.21
HERPUD2-205ENST00000427455 CST5P28325 142 aaPredicted RBP28.83■■■□□ 2.21
HERPUD2-205ENST00000427455 GNA11P29992 359 aa28.83■■■□□ 2.21
HERPUD2-205ENST00000427455 XRRA1Q6P2D8 792 aa28.83■■■□□ 2.21
HERPUD2-205ENST00000427455 SEPT14Q6ZU15 432 aa28.83■■■□□ 2.21
HERPUD2-205ENST00000427455 ZSCAN31Q96LW9 406 aaPredicted RBP28.83■■■□□ 2.21
HERPUD2-205ENST00000427455 PCDHA6Q9UN73 950 aa28.83■■■□□ 2.21
HERPUD2-205ENST00000427455 PCDHA8Q9Y5H6 950 aa28.83■■■□□ 2.21
HERPUD2-205ENST00000427455 FOSP01100 380 aaPredicted RBP28.82■■■□□ 2.2
HERPUD2-205ENST00000427455 C6orf222P0C671 652 aaPredicted RBP28.82■■■□□ 2.2
HERPUD2-205ENST00000427455 NKX3-2P78367 333 aa28.82■■■□□ 2.2
HERPUD2-205ENST00000427455 AP3B2Q13367 1082 aa28.82■■■□□ 2.2
HERPUD2-205ENST00000427455 PCNX4Q63HM2 1172 aa28.82■■■□□ 2.2
HERPUD2-205ENST00000427455 FAM177A1Q8N128 213 aaPredicted RBP28.82■■■□□ 2.2
HERPUD2-205ENST00000427455 KLHDC9Q8NEP7 349 aa28.82■■■□□ 2.2
HERPUD2-205ENST00000427455 TNRC18O15417 2968 aaPredicted RBP28.82■■■□□ 2.2
HERPUD2-205ENST00000427455 TXNP10599 105 aaKnown RBP28.81■■■□□ 2.2
HERPUD2-205ENST00000427455 CLK2P49760 499 aaKnown RBP28.81■■■□□ 2.2
HERPUD2-205ENST00000427455 TMEM63BQ5T3F8 832 aa28.81■■■□□ 2.2
HERPUD2-205ENST00000427455 BICD2Q8TD16 824 aa28.81■■■□□ 2.2
HERPUD2-205ENST00000427455 HTATIP2Q9BUP3 242 aa28.81■■■□□ 2.2
HERPUD2-205ENST00000427455 AP5M1Q9H0R1 490 aa28.81■■■□□ 2.2
HERPUD2-205ENST00000427455 SH2B1Q9NRF2 756 aaPredicted RBP28.81■■■□□ 2.2
HERPUD2-205ENST00000427455 MYADML2A6NDP7 307 aa28.8■■■□□ 2.2
HERPUD2-205ENST00000427455 ARIH2O95376 493 aa28.8■■■□□ 2.2
HERPUD2-205ENST00000427455 MRPS9P82933 396 aaKnown RBP28.8■■■□□ 2.2
HERPUD2-205ENST00000427455 ST3GAL1Q11201 340 aa28.8■■■□□ 2.2
HERPUD2-205ENST00000427455 MCTP2Q6DN12 878 aa28.8■■■□□ 2.2
HERPUD2-205ENST00000427455 CCDC62Q6P9F0 684 aa28.8■■■□□ 2.2
HERPUD2-205ENST00000427455 REXO1Q8N1G1 1221 aaKnown RBP28.8■■■□□ 2.2
HERPUD2-205ENST00000427455 NSUN7Q8NE18 718 aaKnown RBP28.8■■■□□ 2.2
HERPUD2-205ENST00000427455 TSEN34Q9BSV6 310 aaKnown RBP28.8■■■□□ 2.2
HERPUD2-205ENST00000427455 ANO3Q9BYT9 981 aa28.8■■■□□ 2.2
HERPUD2-205ENST00000427455 MRVI1Q9Y6F6 885 aa28.8■■■□□ 2.2
HERPUD2-205ENST00000427455 DYNC1LI2O43237 492 aaPredicted RBP28.79■■■□□ 2.2
HERPUD2-205ENST00000427455 RGS20O76081 388 aa28.79■■■□□ 2.2
HERPUD2-205ENST00000427455 PTGS1P23219 599 aa28.79■■■□□ 2.2
HERPUD2-205ENST00000427455 GNPTABQ3T906 1256 aa28.79■■■□□ 2.2
HERPUD2-205ENST00000427455 WASF1Q92558 559 aa28.79■■■□□ 2.2
HERPUD2-205ENST00000427455 INPP4AQ96PE3 977 aaPredicted RBP28.79■■■□□ 2.2
HERPUD2-205ENST00000427455 ORC3Q9UBD5 711 aaPredicted RBP28.79■■■□□ 2.2
HERPUD2-205ENST00000427455 PHF24Q9UPV7 400 aa28.79■■■□□ 2.2
HERPUD2-205ENST00000427455 CTAGE5O15320 804 aa28.78■■■□□ 2.2
HERPUD2-205ENST00000427455 NLRP5P59047 1200 aa28.78■■■□□ 2.2
HERPUD2-205ENST00000427455 CCSAPQ6IQ19 270 aaPredicted RBP28.78■■■□□ 2.2
HERPUD2-205ENST00000427455 KCNV1Q6PIU1 500 aa28.78■■■□□ 2.2
HERPUD2-205ENST00000427455 PCSK9Q8NBP7 692 aaKnown RBP28.78■■■□□ 2.2
HERPUD2-205ENST00000427455 AIFM3Q96NN9 605 aa28.78■■■□□ 2.2
HERPUD2-205ENST00000427455 TMEM260Q9NX78 707 aa28.78■■■□□ 2.2
HERPUD2-205ENST00000427455 MOXD2PA6NHM9 499 aa28.77■■■□□ 2.2
HERPUD2-205ENST00000427455 IRX5P78411 483 aaPredicted RBP28.77■■■□□ 2.2
HERPUD2-205ENST00000427455 FSCN1Q16658 493 aaKnown RBP28.77■■■□□ 2.2
HERPUD2-205ENST00000427455 GNASQ5JWF2 1037 aa28.77■■■□□ 2.2
HERPUD2-205ENST00000427455 CCDC83Q8IWF9 413 aa28.77■■■□□ 2.2
HERPUD2-205ENST00000427455 OR6J1Q8NGC5 347 aa28.77■■■□□ 2.2
HERPUD2-205ENST00000427455 ZFP91Q96JP5 570 aaPredicted RBP28.77■■■□□ 2.2
HERPUD2-205ENST00000427455 PGBD1Q96JS3 809 aa28.77■■■□□ 2.2
HERPUD2-205ENST00000427455 SENP6Q9GZR1 1112 aaPredicted RBP28.77■■■□□ 2.2
HERPUD2-205ENST00000427455 DDX41Q9UJV9 622 aaKnown RBP28.77■■■□□ 2.2
HERPUD2-205ENST00000427455 PDE4DIPQ5VU43 2346 aa28.76■■■□□ 2.2
HERPUD2-205ENST00000427455 XBP1P17861 261 aa28.76■■■□□ 2.19
HERPUD2-205ENST00000427455 KCNA10Q16322 511 aa28.76■■■□□ 2.19
HERPUD2-205ENST00000427455 LY6KQ17RY6 165 aa28.76■■■□□ 2.19
HERPUD2-205ENST00000427455 JAKMIP3Q5VZ66 844 aa28.76■■■□□ 2.19
HERPUD2-205ENST00000427455 JAK2O60674 1132 aa28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 DTNBO60941 627 aa28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 GH1P01241 217 aa28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 TGFB3P10600 412 aa28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 FDPSP14324 419 aaKnown RBP28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 SREBF1P36956 1147 aa28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 MCM2P49736 904 aa28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 ACLYP53396 1101 aa28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 BEX3Q00994 111 aa28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 GALNT17Q6IS24 598 aa28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 COPS5Q92905 334 aa28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 LLPHQ9BRT6 129 aaKnown RBP28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 RTEL1Q9NZ71 1219 aa28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 PCDHA4Q9UN74 947 aa28.75■■■□□ 2.19
HERPUD2-205ENST00000427455 A0A1W2PQ45 241 aaPredicted RBP28.74■■■□□ 2.19
HERPUD2-205ENST00000427455 A0A1W2PQY0 241 aa28.74■■■□□ 2.19
HERPUD2-205ENST00000427455 ADAMTS3O15072 1205 aa28.74■■■□□ 2.19
HERPUD2-205ENST00000427455 FIBPO43427 364 aa28.74■■■□□ 2.19
HERPUD2-205ENST00000427455 ZEB2O60315 1214 aa28.74■■■□□ 2.19
HERPUD2-205ENST00000427455 ICAM3P32942 547 aa28.74■■■□□ 2.19
HERPUD2-205ENST00000427455 CPT1AP50416 773 aa28.74■■■□□ 2.19
HERPUD2-205ENST00000427455 NLRX1Q86UT6 975 aa28.74■■■□□ 2.19
HERPUD2-205ENST00000427455 DAGLBQ8NCG7 672 aa28.74■■■□□ 2.19
HERPUD2-205ENST00000427455 ALG1Q9BT22 464 aa28.74■■■□□ 2.19
HERPUD2-205ENST00000427455 ALPK3Q96L96 1907 aa28.73■■■□□ 2.19
HERPUD2-205ENST00000427455 ASGR1P07306 291 aa28.73■■■□□ 2.19
HERPUD2-205ENST00000427455 ARHGAP1Q07960 439 aa28.73■■■□□ 2.19
HERPUD2-205ENST00000427455 BRDTQ58F21 947 aaPredicted RBP28.73■■■□□ 2.19
HERPUD2-205ENST00000427455 FERMT2Q96AC1 680 aa28.73■■■□□ 2.19
HERPUD2-205ENST00000427455 GPRASP2Q96D09 838 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms