RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 NOD1Q9Y239 953 aa19.15■□□□□ 0.66
SHANK2-207ENST00000425049 MMP3P08254 477 aa19.14■□□□□ 0.65
SHANK2-207ENST00000425049 CASTP20810 708 aaKnown RBP19.14■□□□□ 0.65
SHANK2-207ENST00000425049 SMARCA1P28370 1054 aa19.14■□□□□ 0.65
SHANK2-207ENST00000425049 ARHGAP1Q07960 439 aa19.14■□□□□ 0.65
SHANK2-207ENST00000425049 PGM5Q15124 567 aa19.14■□□□□ 0.65
SHANK2-207ENST00000425049 NBPF20Q3BBV1 942 aa19.14■□□□□ 0.65
SHANK2-207ENST00000425049 NFRKBQ6P4R8 1299 aa19.14■□□□□ 0.65
SHANK2-207ENST00000425049 KCNV1Q6PIU1 500 aa19.14■□□□□ 0.65
SHANK2-207ENST00000425049 NEK1Q96PY6 1258 aa19.14■□□□□ 0.65
SHANK2-207ENST00000425049 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.14■□□□□ 0.657e-14■■□□□ 14.3
SHANK2-207ENST00000425049 NOC4LQ9BVI4 516 aaKnown RBP19.14■□□□□ 0.65
SHANK2-207ENST00000425049 LRRC2Q9BYS8 371 aa19.14■□□□□ 0.65
SHANK2-207ENST00000425049 TRMT13Q9NUP7 481 aaKnown RBP19.14■□□□□ 0.65
SHANK2-207ENST00000425049 MTMR10Q9NXD2 777 aa19.14■□□□□ 0.65
SHANK2-207ENST00000425049 RXRAP19793 462 aa19.13■□□□□ 0.65
SHANK2-207ENST00000425049 CCL23P55773 120 aa19.13■□□□□ 0.65
SHANK2-207ENST00000425049 LAMC2Q13753 1193 aa19.13■□□□□ 0.65
SHANK2-207ENST00000425049 KRT32Q14532 448 aa19.13■□□□□ 0.65
SHANK2-207ENST00000425049 DGKDQ16760 1214 aa19.13■□□□□ 0.65
SHANK2-207ENST00000425049 MICU3Q86XE3 530 aa19.13■□□□□ 0.65
SHANK2-207ENST00000425049 DHX37Q8IY37 1157 aaKnown RBP19.13■□□□□ 0.65
SHANK2-207ENST00000425049 SMARCC2Q8TAQ2 1214 aa19.13■□□□□ 0.65
SHANK2-207ENST00000425049 FAM161BQ96MY7 647 aa19.13■□□□□ 0.65
SHANK2-207ENST00000425049 IL23AQ9NPF7 189 aa19.13■□□□□ 0.65
SHANK2-207ENST00000425049 DDX41Q9UJV9 622 aaKnown RBP19.13■□□□□ 0.65
SHANK2-207ENST00000425049 BAZ2BQ9UIF8 2168 aaKnown RBP19.13■□□□□ 0.65
SHANK2-207ENST00000425049 PLEKHA8P1O95397 391 aa19.12■□□□□ 0.65
SHANK2-207ENST00000425049 ACRP10323 421 aa19.12■□□□□ 0.65
SHANK2-207ENST00000425049 PTPN11Q06124 597 aaPredicted RBP19.12■□□□□ 0.65
SHANK2-207ENST00000425049 GNPTABQ3T906 1256 aa19.12■□□□□ 0.65
SHANK2-207ENST00000425049 VSIG10LQ86VR7 867 aa19.12■□□□□ 0.65
SHANK2-207ENST00000425049 RAB11FIP4Q86YS3 637 aa19.12■□□□□ 0.65
SHANK2-207ENST00000425049 EMID1Q96A84 441 aaPredicted RBP19.12■□□□□ 0.65
SHANK2-207ENST00000425049 KATNAL1Q9BW62 490 aa19.12■□□□□ 0.65
SHANK2-207ENST00000425049 STXBP5LQ9Y2K9 1186 aa19.12■□□□□ 0.65
SHANK2-207ENST00000425049 UMODL1Q5DID0 1318 aa19.11■□□□□ 0.65
SHANK2-207ENST00000425049 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.11■□□□□ 0.65
SHANK2-207ENST00000425049 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.11■□□□□ 0.65
SHANK2-207ENST00000425049 CYP2C9P11712 490 aa19.11■□□□□ 0.65
SHANK2-207ENST00000425049 FGD1P98174 961 aa19.11■□□□□ 0.65
SHANK2-207ENST00000425049 TMEM240Q5SV17 173 aa19.11■□□□□ 0.65
SHANK2-207ENST00000425049 ZNF365Q70YC5 407 aa19.11■□□□□ 0.65
SHANK2-207ENST00000425049 RPUSD2Q8IZ73 545 aaKnown RBP19.11■□□□□ 0.65
SHANK2-207ENST00000425049 IL31RAQ8NI17 732 aa19.11■□□□□ 0.65
SHANK2-207ENST00000425049 PPTC7Q8NI37 304 aa19.11■□□□□ 0.65
SHANK2-207ENST00000425049 LAMA2P24043 3122 aaKnown RBP19.11■□□□□ 0.65
SHANK2-207ENST00000425049 STAM2O75886 525 aa19.1■□□□□ 0.65
SHANK2-207ENST00000425049 HMGB1P09429 215 aaKnown RBP19.1■□□□□ 0.65
SHANK2-207ENST00000425049 TGFB3P10600 412 aa19.1■□□□□ 0.65
SHANK2-207ENST00000425049 DHX32Q7L7V1 743 aaKnown RBP19.1■□□□□ 0.65
SHANK2-207ENST00000425049 SGMS1Q86VZ5 419 aa19.1■□□□□ 0.65
SHANK2-207ENST00000425049 CMTR1Q8N1G2 835 aaKnown RBP19.1■□□□□ 0.65
SHANK2-207ENST00000425049 SRBD1Q8N5C6 995 aaKnown RBP19.1■□□□□ 0.65
SHANK2-207ENST00000425049 FANCBQ8NB91 859 aa19.1■□□□□ 0.65
SHANK2-207ENST00000425049 RETREG2Q8NC44 543 aa19.1■□□□□ 0.65
SHANK2-207ENST00000425049 WNT8AQ9H1J5 351 aa19.1■□□□□ 0.65
SHANK2-207ENST00000425049 SCN10AQ9Y5Y9 1956 aa19.1■□□□□ 0.65
SHANK2-207ENST00000425049 KIAA1217Q5T5P2 1943 aa19.1■□□□□ 0.65
SHANK2-207ENST00000425049 TMEM265A0A087WTH1 108 aa19.09■□□□□ 0.65
SHANK2-207ENST00000425049 GGPS1O95749 300 aa19.09■□□□□ 0.65
SHANK2-207ENST00000425049 FGBP02675 491 aa19.09■□□□□ 0.65
SHANK2-207ENST00000425049 BFSP2Q13515 415 aa19.09■□□□□ 0.65
SHANK2-207ENST00000425049 TMTC3Q6ZXV5 915 aa19.09■□□□□ 0.65
SHANK2-207ENST00000425049 CCDC82Q8N4S0 544 aa19.09■□□□□ 0.65
SHANK2-207ENST00000425049 CCDC155Q8N6L0 562 aa19.09■□□□□ 0.65
SHANK2-207ENST00000425049 PPP1R13LQ8WUF5 828 aa19.09■□□□□ 0.65
SHANK2-207ENST00000425049 SPATA33Q96N06 139 aa19.09■□□□□ 0.65
SHANK2-207ENST00000425049 MLXIPQ9HAP2 919 aa19.09■□□□□ 0.65
SHANK2-207ENST00000425049 RBM28Q9NW13 759 aaKnown RBP19.09■□□□□ 0.65
SHANK2-207ENST00000425049 FRMPD4Q14CM0 1322 aa19.08■□□□□ 0.65
SHANK2-207ENST00000425049 SORBS3O60504 671 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 PFKMP08237 780 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 ZNF286BP0CG31 522 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 UBA1P22314 1058 aaKnown RBP19.08■□□□□ 0.64
SHANK2-207ENST00000425049 COL9A3Q14050 684 aaPredicted RBP19.08■□□□□ 0.64
SHANK2-207ENST00000425049 PTGISQ16647 500 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 TSGA10IPQ3SY00 556 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 CELF3Q5SZQ8 465 aaKnown RBP19.08■□□□□ 0.64
SHANK2-207ENST00000425049 APOA5Q6Q788 366 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 C16orf59Q7L2K0 433 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 HEATR3Q7Z4Q2 680 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 C7orf31Q8N865 590 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 HERVK_113Q902F9 699 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 SCLYQ96I15 445 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 TCEANC2Q96MN5 208 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 GUCD1Q96NT3 240 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 PSTPIP2Q9H939 334 aa19.08■□□□□ 0.64
SHANK2-207ENST00000425049 NAP1L2Q9ULW6 460 aaPredicted RBP19.08■□□□□ 0.64
SHANK2-207ENST00000425049 PIK3CDO00329 1044 aa19.07■□□□□ 0.64
SHANK2-207ENST00000425049 PITPNM1O00562 1244 aa19.07■□□□□ 0.64
SHANK2-207ENST00000425049 NOP56O00567 594 aaKnown RBP19.07■□□□□ 0.64
SHANK2-207ENST00000425049 ZBTB43O43298 467 aa19.07■□□□□ 0.64
SHANK2-207ENST00000425049 RGS20O76081 388 aa19.07■□□□□ 0.64
SHANK2-207ENST00000425049 REC8O95072 547 aa19.07■□□□□ 0.64
SHANK2-207ENST00000425049 DNAJB2P25686 324 aa19.07■□□□□ 0.64
SHANK2-207ENST00000425049 MFSD10Q14728 455 aa19.07■□□□□ 0.64
SHANK2-207ENST00000425049 RTN1Q16799 776 aa19.07■□□□□ 0.64
SHANK2-207ENST00000425049 MYSM1Q5VVJ2 828 aa19.07■□□□□ 0.64
SHANK2-207ENST00000425049 XRRA1Q6P2D8 792 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms