RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 USP17L21D6R901 530 aa14.29□□□□□ -0.12
TOP2B-203ENST00000424225 SSBP05455 408 aaKnown RBP eCLIP14.29□□□□□ -0.12
TOP2B-203ENST00000424225 CDC25CP30307 473 aa14.29□□□□□ -0.12
TOP2B-203ENST00000424225 RRAGAQ7L523 313 aa14.29□□□□□ -0.12
TOP2B-203ENST00000424225 YTHDF3Q7Z739 585 aaKnown RBP14.29□□□□□ -0.12
TOP2B-203ENST00000424225 CD302Q8IX05 232 aa14.29□□□□□ -0.12
TOP2B-203ENST00000424225 ATP6V1G3Q96LB4 118 aa14.29□□□□□ -0.12
TOP2B-203ENST00000424225 CCDC42Q96M95 316 aa14.29□□□□□ -0.12
TOP2B-203ENST00000424225 BCAS3Q9H6U6 928 aa14.29□□□□□ -0.12
TOP2B-203ENST00000424225 COL5A2P05997 1499 aaPredicted RBP14.29□□□□□ -0.12
TOP2B-203ENST00000424225 GRID2IPA4D2P6 1211 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 RTN2O75298 545 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 CYP19A1P11511 503 aaPredicted RBP14.28□□□□□ -0.12
TOP2B-203ENST00000424225 ITGA4P13612 1032 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 LRRC41Q15345 812 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 TRIM58Q8NG06 486 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 AJAP1Q9UKB5 411 aaPredicted RBP14.28□□□□□ -0.12
TOP2B-203ENST00000424225 PCDH11XQ9BZA7 1347 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 PCDH11YQ9BZA8 1340 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 ZNF335Q9H4Z2 1342 aaPredicted RBP14.28□□□□□ -0.12
TOP2B-203ENST00000424225 CCDC196A0A1B0GTZ2 297 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 FRMD3A2A2Y4 597 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 PHF20L1A8MW92 1017 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 CCNE1P24864 410 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 LONP1P36776 959 aaKnown RBP14.28□□□□□ -0.12
TOP2B-203ENST00000424225 SMTNP53814 917 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 NLRP5P59047 1200 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 MREGQ8N565 214 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 A0A087X0T9 212 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 MYMKA6NI61 221 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 FAM228BP0C875 321 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 CYLC1P35663 651 aaPredicted RBP14.28□□□□□ -0.12
TOP2B-203ENST00000424225 CCDC40Q4G0X9 1142 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 FIGNQ5HY92 759 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 CENPPQ6IPU0 288 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 C8orf74Q6P047 294 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 OTUD6BQ8N6M0 293 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 MAD2L2Q9UI95 211 aa14.28□□□□□ -0.12
TOP2B-203ENST00000424225 ATAD5Q96QE3 1844 aa14.27□□□□□ -0.12
TOP2B-203ENST00000424225 FAM107AO95990 144 aa14.27□□□□□ -0.12
TOP2B-203ENST00000424225 VWA3BQ502W6 1294 aa14.27□□□□□ -0.12
TOP2B-203ENST00000424225 ANKRD20A8PQ5CZ79 823 aa14.27□□□□□ -0.12
TOP2B-203ENST00000424225 ZNF34Q8IZ26 560 aa14.27□□□□□ -0.12
TOP2B-203ENST00000424225 ADAM7Q9H2U9 754 aa14.27□□□□□ -0.12
TOP2B-203ENST00000424225 HYOU1Q9Y4L1 999 aa14.27□□□□□ -0.12
TOP2B-203ENST00000424225 E7EVH7 732 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 TRAPPC3O43617 180 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 UQCRFS1P1P0C7P4 283 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 CDC37Q16543 378 aaPredicted RBP14.27□□□□□ -0.13
TOP2B-203ENST00000424225 MEI1Q5TIA1 1274 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 ESR2Q92731 530 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 MIEF2Q96C03 454 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 PNMA5Q96PV4 448 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 NDST4Q9H3R1 872 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 MYH14Q7Z406 1995 aaKnown RBP14.27□□□□□ -0.13
TOP2B-203ENST00000424225 SHTN1A0MZ66 631 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 RBAK-RBAKDNI3L0D1 243 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 PDE8AO60658 829 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 PDE4DQ08499 809 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 CYB5D1Q6P9G0 228 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 BLIDQ8IZY5 108 aa14.27□□□□□ -0.13
TOP2B-203ENST00000424225 ERICH2A1L162 156 aa14.26□□□□□ -0.13
TOP2B-203ENST00000424225 MCM3P25205 808 aa14.26□□□□□ -0.13
TOP2B-203ENST00000424225 NBPF9Q3BBW0 867 aa14.26□□□□□ -0.13
TOP2B-203ENST00000424225 CCDC178Q5BJE1 867 aa14.26□□□□□ -0.13
TOP2B-203ENST00000424225 ARL6IP4Q66PJ3 421 aaKnown RBP14.26□□□□□ -0.13
TOP2B-203ENST00000424225 TMTC2Q8N394 836 aa14.26□□□□□ -0.13
TOP2B-203ENST00000424225 RAPGEF5Q92565 580 aa14.26□□□□□ -0.13
TOP2B-203ENST00000424225 NLRC4Q9NPP4 1024 aa14.26□□□□□ -0.13
TOP2B-203ENST00000424225 ABCF2Q9UG63 623 aa14.26□□□□□ -0.13
TOP2B-203ENST00000424225 HSPA9P38646 679 aaKnown RBP14.26□□□□□ -0.13
TOP2B-203ENST00000424225 POTEDQ86YR6 584 aa14.26□□□□□ -0.13
TOP2B-203ENST00000424225 JAG2Q9Y219 1238 aa14.26□□□□□ -0.13
TOP2B-203ENST00000424225 ATP6V1AP38606 617 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 EHHADHQ08426 723 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 GRB10Q13322 594 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 RNF187Q5TA31 235 aaPredicted RBP14.25□□□□□ -0.13
TOP2B-203ENST00000424225 PDXDC1Q6P996 788 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 SMIM5Q71RC9 77 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 CCT6BQ92526 530 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 MTA3Q9BTC8 594 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 ZNF804BA4D1E1 1349 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 HSF2BPO75031 334 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 SHBGP04278 402 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 GOLGA8HP0CJ92 632 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 CHRNDQ07001 517 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 E2F5Q15329 346 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 CEP85LQ5SZL2 805 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 KLHL7Q8IXQ5 586 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 DYNLL2Q96FJ2 89 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 AP1M1Q9BXS5 423 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 LRP2BPQ9P2M1 347 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 RTL9Q8NET4 1388 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 MROH5Q6ZUA9 1318 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 USP17L3A6NCW0 530 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 USP17L4A6NCW7 530 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 STXBP3O00186 592 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 USP17L1Q7RTZ2 530 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 CATIPQ7Z7H3 387 aa14.25□□□□□ -0.13
TOP2B-203ENST00000424225 DHTKD1Q96HY7 919 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms