RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 PHF20Q9BVI0 1012 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 KATNBL1Q9H079 304 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 RNF208Q9H0X6 261 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 ABHD16BQ9H3Z7 469 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
PDGFC-202ENST00000422544 ZHX1Q9UKY1 873 aaPredicted RBP10.62□□□□□ -0.71
PDGFC-202ENST00000422544 SMC3Q9UQE7 1217 aa10.62□□□□□ -0.71
PDGFC-202ENST00000422544 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.62□□□□□ -0.71
PDGFC-202ENST00000422544 LOC102724159A0A0B4J2E5 919 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 FOSP01100 380 aaPredicted RBP10.61□□□□□ -0.71
PDGFC-202ENST00000422544 GJB2P29033 226 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 TRIM29Q14134 588 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 PGM5Q15124 567 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 PWP2Q15269 919 aaKnown RBP10.61□□□□□ -0.71
PDGFC-202ENST00000422544 NPY5RQ15761 445 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 STXBP2Q15833 593 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 KRT40Q6A162 431 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 GALNT17Q6IS24 598 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 UBE2Q1Q7Z7E8 422 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 VSIG10LQ86VR7 867 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 TEX2Q8IWB9 1127 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 BLIDQ8IZY5 108 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 REXO1Q8N1G1 1221 aaKnown RBP10.61□□□□□ -0.71
PDGFC-202ENST00000422544 OXER1Q8TDS5 423 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 C8orf76Q96K31 380 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.61□□□□□ -0.71
PDGFC-202ENST00000422544 PDGFCQ9NRA1 345 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 RTEL1Q9NZ71 1219 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 NRBP1Q9UHY1 535 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 ZNF236Q9UL36 1845 aa10.61□□□□□ -0.71
PDGFC-202ENST00000422544 ZNFX1Q9P2E3 1918 aaKnown RBP10.6□□□□□ -0.71
PDGFC-202ENST00000422544 M0R2N6 131 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 SOX1O00570 391 aaPredicted RBP10.6□□□□□ -0.71
PDGFC-202ENST00000422544 EIF3JO75822 258 aaKnown RBP10.6□□□□□ -0.71
PDGFC-202ENST00000422544 CCND2P30279 289 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 MRPS9P82933 396 aaKnown RBP10.6□□□□□ -0.71
PDGFC-202ENST00000422544 AP3B2Q13367 1082 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 CCDC144BQ3MJ40 725 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 ANO1Q5XXA6 986 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 TAPT1Q6NXT6 567 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 SEPT14Q6ZU15 432 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 FAM177A1Q8N128 213 aaPredicted RBP10.6□□□□□ -0.71
PDGFC-202ENST00000422544 DAGLBQ8NCG7 672 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 DEFB118Q96PH6 123 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 TMEM106CQ9BVX2 250 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 ANO3Q9BYT9 981 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 VTA1Q9NP79 307 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 FAM184BQ9ULE4 1060 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 MYH6P13533 1939 aa10.6□□□□□ -0.71
PDGFC-202ENST00000422544 FRMPD4Q14CM0 1322 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.59□□□□□ -0.71
PDGFC-202ENST00000422544 SEPT4O43236 478 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 MMP1P03956 469 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 PTGS1P23219 599 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 KRT2P35908 639 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 SREBF1P36956 1147 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 ADCYAP1R1P41586 468 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 NR5A1Q13285 461 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 TMEM63BQ5T3F8 832 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 PCNX4Q63HM2 1172 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 MCTP2Q6DN12 878 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 FBXO18Q8NFZ0 1043 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 LENG1Q96BZ8 264 aaPredicted RBP10.59□□□□□ -0.71
PDGFC-202ENST00000422544 INTS4Q96HW7 963 aaKnown RBP10.59□□□□□ -0.71
PDGFC-202ENST00000422544 EHMT1Q9H9B1 1298 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 PAK6Q9NQU5 681 aaPredicted RBP10.59□□□□□ -0.71
PDGFC-202ENST00000422544 DDX20Q9UHI6 824 aaKnown RBP10.59□□□□□ -0.71
PDGFC-202ENST00000422544 KIF3AQ9Y496 699 aa10.59□□□□□ -0.71
PDGFC-202ENST00000422544 RBM47A0AV96 593 aaKnown RBP10.58□□□□□ -0.72
PDGFC-202ENST00000422544 BTBD18B2RXH4 712 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 DLL1O00548 723 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 ADCY6O43306 1168 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 RGS20O76081 388 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 GJB1P08034 283 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 AKR1A1P14550 325 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 SMPD1P17405 629 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 ARHGAP4P98171 946 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 TNFAIP2Q03169 654 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 SAFBQ15424 915 aaKnown RBP eCLIP10.58□□□□□ -0.72
PDGFC-202ENST00000422544 LARP1BQ659C4 914 aaKnown RBP10.58□□□□□ -0.72
PDGFC-202ENST00000422544 LHX8Q68G74 356 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 IQSEC1Q6DN90 963 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 XRRA1Q6P2D8 792 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 CHRDL2Q6WN34 429 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 KRT25Q7Z3Z0 450 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 DIS3L2Q8IYB7 885 aaKnown RBP10.58□□□□□ -0.72
PDGFC-202ENST00000422544 SPRYD3Q8NCJ5 442 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 CYP2W1Q8TAV3 490 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 TBCKQ8TEA7 893 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 WDR11Q9BZH6 1224 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 BRMS1Q9HCU9 246 aa10.58□□□□□ -0.72
PDGFC-202ENST00000422544 CCDC194A0A1B0GVG4 234 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 SPATA31C2B4DYI2 1134 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 H3BQV1 296 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 EDIL3O43854 480 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 STAM2O75886 525 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 ARIH2O95376 493 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 SGPL1O95470 568 aa10.57□□□□□ -0.72
PDGFC-202ENST00000422544 TFRCP02786 760 aaKnown RBP10.57□□□□□ -0.72
PDGFC-202ENST00000422544 HSP90AA1P07900 732 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms