RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 SRBD1Q8N5C6 995 aaKnown RBP25.3■■□□□ 1.64
TRAF4-204ENST00000422344 JAKMIP1Q96N16 626 aaKnown RBP25.3■■□□□ 1.64
TRAF4-204ENST00000422344 TOX2Q96NM4 488 aa25.3■■□□□ 1.64
TRAF4-204ENST00000422344 ARVCFO00192 962 aa25.29■■□□□ 1.64
TRAF4-204ENST00000422344 FOSL2P15408 326 aa25.29■■□□□ 1.64
TRAF4-204ENST00000422344 FAAP100Q0VG06 881 aa25.29■■□□□ 1.64
TRAF4-204ENST00000422344 APOA5Q6Q788 366 aa25.29■■□□□ 1.64
TRAF4-204ENST00000422344 FCHSD1Q86WN1 690 aa25.29■■□□□ 1.64
TRAF4-204ENST00000422344 KCNB2Q92953 911 aa25.29■■□□□ 1.64
TRAF4-204ENST00000422344 POLR3EQ9NVU0 708 aa25.29■■□□□ 1.64
TRAF4-204ENST00000422344 RBM28Q9NW13 759 aaKnown RBP25.29■■□□□ 1.64
TRAF4-204ENST00000422344 NAP1L2Q9ULW6 460 aaPredicted RBP25.29■■□□□ 1.64
TRAF4-204ENST00000422344 SNX14Q9Y5W7 946 aa25.29■■□□□ 1.64
TRAF4-204ENST00000422344 ZBTB43O43298 467 aa25.28■■□□□ 1.64
TRAF4-204ENST00000422344 EIF3JO75822 258 aaKnown RBP25.28■■□□□ 1.64
TRAF4-204ENST00000422344 MYCLP12524 364 aaPredicted RBP25.28■■□□□ 1.64
TRAF4-204ENST00000422344 BLOC1S2Q6QNY1 142 aa25.28■■□□□ 1.64
TRAF4-204ENST00000422344 TMTC3Q6ZXV5 915 aa25.28■■□□□ 1.64
TRAF4-204ENST00000422344 CCDC82Q8N4S0 544 aa25.28■■□□□ 1.64
TRAF4-204ENST00000422344 CUL5Q93034 780 aa25.28■■□□□ 1.64
TRAF4-204ENST00000422344 PDCD2LQ9BRP1 358 aa25.28■■□□□ 1.64
TRAF4-204ENST00000422344 TLR3O15455 904 aaKnown RBP25.27■■□□□ 1.64
TRAF4-204ENST00000422344 MYL3P08590 195 aa25.27■■□□□ 1.64
TRAF4-204ENST00000422344 RTN1Q16799 776 aa25.27■■□□□ 1.64
TRAF4-204ENST00000422344 KLF18A0A0U1RQI7 1052 aa25.26■■□□□ 1.63
TRAF4-204ENST00000422344 PSMA5P28066 241 aa25.26■■□□□ 1.63
TRAF4-204ENST00000422344 CDK7P50613 346 aa25.26■■□□□ 1.63
TRAF4-204ENST00000422344 SMARCC2Q8TAQ2 1214 aa25.26■■□□□ 1.63
TRAF4-204ENST00000422344 COPS5Q92905 334 aa25.26■■□□□ 1.63
TRAF4-204ENST00000422344 BRPF3Q9ULD4 1205 aa25.26■■□□□ 1.63
TRAF4-204ENST00000422344 MRVI1Q9Y6F6 885 aa25.26■■□□□ 1.63
TRAF4-204ENST00000422344 SPTBN5Q9NRC6 3674 aaKnown RBP25.25■■□□□ 1.63
TRAF4-204ENST00000422344 TMEM265A0A087WTH1 108 aa25.25■■□□□ 1.63
TRAF4-204ENST00000422344 GOLGA8AA7E2F4 631 aa25.25■■□□□ 1.63
TRAF4-204ENST00000422344 GOLGA8BA8MQT2 603 aa25.25■■□□□ 1.63
TRAF4-204ENST00000422344 EPB41L2O43491 1005 aaKnown RBP25.25■■□□□ 1.63
TRAF4-204ENST00000422344 ARIH2O95376 493 aa25.25■■□□□ 1.63
TRAF4-204ENST00000422344 GH1P01241 217 aa25.25■■□□□ 1.63
TRAF4-204ENST00000422344 CCND2P30279 289 aa25.25■■□□□ 1.63
TRAF4-204ENST00000422344 ITGA7Q13683 1181 aa25.25■■□□□ 1.63
TRAF4-204ENST00000422344 PGM5Q15124 567 aa25.25■■□□□ 1.63
TRAF4-204ENST00000422344 SEZ6LQ9BYH1 1024 aa25.25■■□□□ 1.63
TRAF4-204ENST00000422344 KPNA6O60684 536 aa25.24■■□□□ 1.63
TRAF4-204ENST00000422344 CPA1P15085 419 aa25.24■■□□□ 1.63
TRAF4-204ENST00000422344 LY6KQ17RY6 165 aa25.24■■□□□ 1.63
TRAF4-204ENST00000422344 CCDC62Q6P9F0 684 aa25.24■■□□□ 1.63
TRAF4-204ENST00000422344 Q6ZUG5 572 aa25.24■■□□□ 1.63
TRAF4-204ENST00000422344 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.23■■□□□ 1.63
TRAF4-204ENST00000422344 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.23■■□□□ 1.63
TRAF4-204ENST00000422344 hCG_1642624A0A1W2PR95 340 aa25.23■■□□□ 1.63
TRAF4-204ENST00000422344 TIMP1P01033 207 aa25.23■■□□□ 1.63
TRAF4-204ENST00000422344 DNAJB2P25686 324 aa25.23■■□□□ 1.63
TRAF4-204ENST00000422344 PSMC6P62333 389 aa25.23■■□□□ 1.63
TRAF4-204ENST00000422344 HEATR3Q7Z4Q2 680 aa25.23■■□□□ 1.63
TRAF4-204ENST00000422344 VSIG10LQ86VR7 867 aa25.23■■□□□ 1.63
TRAF4-204ENST00000422344 FAM126BQ8IXS8 530 aa25.23■■□□□ 1.63
TRAF4-204ENST00000422344 MTG1Q9BT17 334 aaPredicted RBP25.23■■□□□ 1.63
TRAF4-204ENST00000422344 TTC28Q96AY4 2481 aa25.23■■□□□ 1.63
TRAF4-204ENST00000422344 A6NJR5 290 aa25.22■■□□□ 1.63
TRAF4-204ENST00000422344 CASTP20810 708 aaKnown RBP25.22■■□□□ 1.63
TRAF4-204ENST00000422344 RPS6KB1P23443 525 aa25.22■■□□□ 1.63
TRAF4-204ENST00000422344 RCAN1P53805 252 aa25.22■■□□□ 1.63
TRAF4-204ENST00000422344 PURAQ00577 322 aaKnown RBP25.22■■□□□ 1.63
TRAF4-204ENST00000422344 GRIN2CQ14957 1233 aa25.22■■□□□ 1.63
TRAF4-204ENST00000422344 KCNV1Q6PIU1 500 aa25.22■■□□□ 1.63
TRAF4-204ENST00000422344 IL31RAQ8NI17 732 aa25.22■■□□□ 1.63
TRAF4-204ENST00000422344 PSTPIP2Q9H939 334 aa25.22■■□□□ 1.63
TRAF4-204ENST00000422344 TBX21Q9UL17 535 aa25.22■■□□□ 1.63
TRAF4-204ENST00000422344 KIAA1217Q5T5P2 1943 aa25.22■■□□□ 1.63
TRAF4-204ENST00000422344 USP17L6PQ6QN14 398 aa25.21■■□□□ 1.63
TRAF4-204ENST00000422344 SLC43A3Q8NBI5 491 aa25.21■■□□□ 1.63
TRAF4-204ENST00000422344 BRF1Q92994 677 aa25.21■■□□□ 1.63
TRAF4-204ENST00000422344 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.21■■□□□ 1.634e-8■■□□□ 13.6
TRAF4-204ENST00000422344 DDX41Q9UJV9 622 aaKnown RBP25.21■■□□□ 1.63
TRAF4-204ENST00000422344 CNTNAP5Q8WYK1 1306 aa25.2■■□□□ 1.62
TRAF4-204ENST00000422344 CCDC196A0A1B0GTZ2 297 aa25.2■■□□□ 1.62
TRAF4-204ENST00000422344 PIK3CDO00329 1044 aa25.2■■□□□ 1.62
TRAF4-204ENST00000422344 METAP2P50579 478 aaKnown RBP eCLIP25.2■■□□□ 1.62
TRAF4-204ENST00000422344 ARHGAP1Q07960 439 aa25.2■■□□□ 1.62
TRAF4-204ENST00000422344 APOBRQ0VD83 1088 aa25.2■■□□□ 1.62
TRAF4-204ENST00000422344 MFSD5Q6N075 450 aa25.2■■□□□ 1.62
TRAF4-204ENST00000422344 AFG1LQ8WV93 481 aa25.2■■□□□ 1.62
TRAF4-204ENST00000422344 LAMC2Q13753 1193 aa25.19■■□□□ 1.62
TRAF4-204ENST00000422344 GNPTABQ3T906 1256 aa25.19■■□□□ 1.62
TRAF4-204ENST00000422344 DHX37Q8IY37 1157 aaKnown RBP25.19■■□□□ 1.62
TRAF4-204ENST00000422344 GPKOWQ92917 476 aaPredicted RBP eCLIP25.19■■□□□ 1.62
TRAF4-204ENST00000422344 USP26Q9BXU7 913 aa25.19■■□□□ 1.62
TRAF4-204ENST00000422344 MYO9BQ13459 2157 aa25.19■■□□□ 1.62
TRAF4-204ENST00000422344 GRIN2DO15399 1336 aa25.18■■□□□ 1.62
TRAF4-204ENST00000422344 FRMPD4Q14CM0 1322 aa25.18■■□□□ 1.62
TRAF4-204ENST00000422344 STAM2O75886 525 aa25.18■■□□□ 1.62
TRAF4-204ENST00000422344 MMP3P08254 477 aa25.18■■□□□ 1.62
TRAF4-204ENST00000422344 PPIGQ13427 754 aaKnown RBP eCLIP25.18■■□□□ 1.626e-10■■□□□ 12.8
TRAF4-204ENST00000422344 FAM47CQ5HY64 1035 aa25.18■■□□□ 1.62
TRAF4-204ENST00000422344 TIFAQ96CG3 184 aa25.18■■□□□ 1.62
TRAF4-204ENST00000422344 ZFP91Q96JP5 570 aaPredicted RBP25.18■■□□□ 1.62
TRAF4-204ENST00000422344 ZNF576Q9H609 170 aa25.18■■□□□ 1.62
TRAF4-204ENST00000422344 V9GY48 417 aaPredicted RBP25.18■■□□□ 1.62
TRAF4-204ENST00000422344 MEIS2O14770 477 aa25.17■■□□□ 1.62
TRAF4-204ENST00000422344 RGS20O76081 388 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms