RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 DDX41Q9UJV9 622 aaKnown RBP20.85■□□□□ 0.93
UBXN11-208ENST00000421827 SNX14Q9Y5W7 946 aa20.85■□□□□ 0.93
UBXN11-208ENST00000421827 KPNA6O60684 536 aa20.84■□□□□ 0.93
UBXN11-208ENST00000421827 TIMP1P01033 207 aa20.84■□□□□ 0.93
UBXN11-208ENST00000421827 IL31RAQ8NI17 732 aa20.84■□□□□ 0.93
UBXN11-208ENST00000421827 JAKMIP1Q96N16 626 aaKnown RBP20.84■□□□□ 0.93
UBXN11-208ENST00000421827 RBM28Q9NW13 759 aaKnown RBP20.84■□□□□ 0.93
UBXN11-208ENST00000421827 BRPF3Q9ULD4 1205 aa20.84■□□□□ 0.93
UBXN11-208ENST00000421827 MRVI1Q9Y6F6 885 aa20.84■□□□□ 0.93
UBXN11-208ENST00000421827 KIAA1217Q5T5P2 1943 aa20.83■□□□□ 0.93
UBXN11-208ENST00000421827 ZBTB43O43298 467 aa20.83■□□□□ 0.93
UBXN11-208ENST00000421827 RGS20O76081 388 aa20.83■□□□□ 0.93
UBXN11-208ENST00000421827 CCND2P30279 289 aa20.83■□□□□ 0.93
UBXN11-208ENST00000421827 FGD1P98174 961 aa20.83■□□□□ 0.93
UBXN11-208ENST00000421827 FPGSQ05932 587 aa20.83■□□□□ 0.93
UBXN11-208ENST00000421827 ARHGAP1Q07960 439 aa20.83■□□□□ 0.93
UBXN11-208ENST00000421827 AFG1LQ8WV93 481 aa20.83■□□□□ 0.93
UBXN11-208ENST00000421827 CUL5Q93034 780 aa20.83■□□□□ 0.93
UBXN11-208ENST00000421827 KLF18A0A0U1RQI7 1052 aa20.82■□□□□ 0.92
UBXN11-208ENST00000421827 hCG_1642624A0A1W2PR95 340 aa20.82■□□□□ 0.92
UBXN11-208ENST00000421827 CPA1P15085 419 aa20.82■□□□□ 0.92
UBXN11-208ENST00000421827 SHHQ15465 462 aa20.82■□□□□ 0.92
UBXN11-208ENST00000421827 RTN1Q16799 776 aa20.82■□□□□ 0.92
UBXN11-208ENST00000421827 MFSD5Q6N075 450 aa20.82■□□□□ 0.92
UBXN11-208ENST00000421827 KCNV1Q6PIU1 500 aa20.82■□□□□ 0.92
UBXN11-208ENST00000421827 USP17L6PQ6QN14 398 aa20.82■□□□□ 0.92
UBXN11-208ENST00000421827 SMARCC2Q8TAQ2 1214 aa20.82■□□□□ 0.92
UBXN11-208ENST00000421827 TRPV6Q9H1D0 765 aa20.82■□□□□ 0.92
UBXN11-208ENST00000421827 PIK3CDO00329 1044 aa20.81■□□□□ 0.92
UBXN11-208ENST00000421827 MEIS2O14770 477 aa20.81■□□□□ 0.92
UBXN11-208ENST00000421827 EPB41L2O43491 1005 aaKnown RBP20.81■□□□□ 0.92
UBXN11-208ENST00000421827 C9orf50Q5SZB4 431 aa20.81■□□□□ 0.92
UBXN11-208ENST00000421827 BLOC1S2Q6QNY1 142 aa20.81■□□□□ 0.92
UBXN11-208ENST00000421827 EMID1Q96A84 441 aaPredicted RBP20.81■□□□□ 0.92
UBXN11-208ENST00000421827 ALDH8A1Q9H2A2 487 aaPredicted RBP20.81■□□□□ 0.92
UBXN11-208ENST00000421827 FRMPD4Q14CM0 1322 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 GOLGA8AA7E2F4 631 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 GOLGA8BA8MQT2 603 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 B4GALT4O60513 344 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 MMP3P08254 477 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 PSMA5P28066 241 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 RCAN1P53805 252 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 EPHB4P54760 987 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 LAMC2Q13753 1193 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 NBPF20Q3BBV1 942 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 GPR153Q6NV75 609 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 Q6ZUG5 572 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 ZFP91Q96JP5 570 aaPredicted RBP20.8■□□□□ 0.92
UBXN11-208ENST00000421827 PPP1R12CQ9BZL4 782 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 PSTPIP2Q9H939 334 aa20.8■□□□□ 0.92
UBXN11-208ENST00000421827 LAMA2P24043 3122 aaKnown RBP20.8■□□□□ 0.92
UBXN11-208ENST00000421827 CNTNAP5Q8WYK1 1306 aa20.79■□□□□ 0.92
UBXN11-208ENST00000421827 STAM2O75886 525 aa20.79■□□□□ 0.92
UBXN11-208ENST00000421827 TGFB3P10600 412 aa20.79■□□□□ 0.92
UBXN11-208ENST00000421827 FUT2Q10981 343 aa20.79■□□□□ 0.92
UBXN11-208ENST00000421827 HEATR3Q7Z4Q2 680 aa20.79■□□□□ 0.92
UBXN11-208ENST00000421827 DHX37Q8IY37 1157 aaKnown RBP20.79■□□□□ 0.92
UBXN11-208ENST00000421827 HIPK3Q9H422 1215 aa20.79■□□□□ 0.92
UBXN11-208ENST00000421827 NAP1L2Q9ULW6 460 aaPredicted RBP20.79■□□□□ 0.92
UBXN11-208ENST00000421827 SCN10AQ9Y5Y9 1956 aa20.79■□□□□ 0.92
UBXN11-208ENST00000421827 CASTP20810 708 aaKnown RBP20.78■□□□□ 0.92
UBXN11-208ENST00000421827 RPS6KB1P23443 525 aa20.78■□□□□ 0.92
UBXN11-208ENST00000421827 MRPS9P82933 396 aaKnown RBP20.78■□□□□ 0.92
UBXN11-208ENST00000421827 APOBRQ0VD83 1088 aa20.78■□□□□ 0.92
UBXN11-208ENST00000421827 PPIGQ13427 754 aaKnown RBP eCLIP20.78■□□□□ 0.923e-9■■■■■ 33.2
UBXN11-208ENST00000421827 DGKDQ16760 1214 aa20.78■□□□□ 0.92
UBXN11-208ENST00000421827 FAM47CQ5HY64 1035 aa20.78■□□□□ 0.92
UBXN11-208ENST00000421827 NFRKBQ6P4R8 1299 aa20.78■□□□□ 0.92
UBXN11-208ENST00000421827 FBXL16Q8N461 479 aa20.78■□□□□ 0.92
UBXN11-208ENST00000421827 TMEM199Q8N511 208 aa20.78■□□□□ 0.92
UBXN11-208ENST00000421827 PPTC7Q8NI37 304 aa20.78■□□□□ 0.92
UBXN11-208ENST00000421827 GPKOWQ92917 476 aaPredicted RBP eCLIP20.78■□□□□ 0.92
UBXN11-208ENST00000421827 BRF1Q92994 677 aa20.78■□□□□ 0.92
UBXN11-208ENST00000421827 FAM217BQ9NTX9 383 aaPredicted RBP20.78■□□□□ 0.92
UBXN11-208ENST00000421827 TRMT13Q9NUP7 481 aaKnown RBP20.78■□□□□ 0.92
UBXN11-208ENST00000421827 GGPS1O95749 300 aa20.77■□□□□ 0.92
UBXN11-208ENST00000421827 SUPT20HL2P0C7V6 817 aa20.77■□□□□ 0.92
UBXN11-208ENST00000421827 CDC27P30260 824 aa20.77■□□□□ 0.92
UBXN11-208ENST00000421827 CYP2C18P33260 490 aa20.77■□□□□ 0.92
UBXN11-208ENST00000421827 SP2Q02086 613 aa20.77■□□□□ 0.92
UBXN11-208ENST00000421827 PTPN11Q06124 597 aaPredicted RBP20.77■□□□□ 0.92
UBXN11-208ENST00000421827 GNPTABQ3T906 1256 aa20.77■□□□□ 0.92
UBXN11-208ENST00000421827 CELF3Q5SZQ8 465 aaKnown RBP20.77■□□□□ 0.92
UBXN11-208ENST00000421827 MYSM1Q5VVJ2 828 aa20.77■□□□□ 0.92
UBXN11-208ENST00000421827 XRRA1Q6P2D8 792 aa20.77■□□□□ 0.92
UBXN11-208ENST00000421827 INPP4AQ96PE3 977 aaPredicted RBP20.77■□□□□ 0.92
UBXN11-208ENST00000421827 NOC4LQ9BVI4 516 aaKnown RBP20.77■□□□□ 0.92
UBXN11-208ENST00000421827 USP26Q9BXU7 913 aa20.77■□□□□ 0.92
UBXN11-208ENST00000421827 V9GY48 417 aaPredicted RBP20.77■□□□□ 0.92
UBXN11-208ENST00000421827 CSF2RAP15509 400 aa20.76■□□□□ 0.91
UBXN11-208ENST00000421827 UBA1P22314 1058 aaKnown RBP20.76■□□□□ 0.91
UBXN11-208ENST00000421827 METAP2P50579 478 aaKnown RBP eCLIP20.76■□□□□ 0.91
UBXN11-208ENST00000421827 PCNX4Q63HM2 1172 aa20.76■□□□□ 0.91
UBXN11-208ENST00000421827 WWC2Q6AWC2 1192 aa20.76■□□□□ 0.91
UBXN11-208ENST00000421827 PPP1R13LQ8WUF5 828 aa20.76■□□□□ 0.91
UBXN11-208ENST00000421827 RNPC3Q96LT9 517 aaKnown RBP20.76■□□□□ 0.91
UBXN11-208ENST00000421827 AGXT2Q9BYV1 514 aa20.76■□□□□ 0.91
UBXN11-208ENST00000421827 RTEL1Q9NZ71 1219 aa20.76■□□□□ 0.91
UBXN11-208ENST00000421827 UMODL1Q5DID0 1318 aa20.76■□□□□ 0.91
UBXN11-208ENST00000421827 CCDC196A0A1B0GTZ2 297 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms