RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 SMARCC2Q8TAQ2 1214 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 LOXL4Q96JB6 756 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 PCDH18Q9HCL0 1135 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 CFDP1Q9UEE9 299 aaPredicted RBP5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 ZFYVE16Q7Z3T8 1539 aa5.48□□□□□ -1.53
SEMA3A-202ENST00000420047 LMTK3Q96Q04 1460 aa5.47□□□□□ -1.53
SEMA3A-202ENST00000420047 TBC1D10BQ4KMP7 808 aaPredicted RBP5.47□□□□□ -1.53
SEMA3A-202ENST00000420047 RCSD1Q6JBY9 416 aa5.47□□□□□ -1.53
SEMA3A-202ENST00000420047 ADAMTS17Q8TE56 1095 aa5.47□□□□□ -1.53
SEMA3A-202ENST00000420047 BRF1Q92994 677 aa5.47□□□□□ -1.53
SEMA3A-202ENST00000420047 C8orf49Q96NF6 230 aa5.47□□□□□ -1.53
SEMA3A-202ENST00000420047 NOX5Q96PH1 765 aa5.47□□□□□ -1.53
SEMA3A-202ENST00000420047 GGT7Q9UJ14 662 aa5.47□□□□□ -1.53
SEMA3A-202ENST00000420047 ZNRF3Q9ULT6 936 aa5.47□□□□□ -1.53
SEMA3A-202ENST00000420047 DIS3Q9Y2L1 958 aaKnown RBP5.47□□□□□ -1.53
SEMA3A-202ENST00000420047 GPATCH8Q9UKJ3 1502 aaKnown RBP5.47□□□□□ -1.53
SEMA3A-202ENST00000420047 MYO5CQ9NQX4 1742 aa5.46□□□□□ -1.54
SEMA3A-202ENST00000420047 SMARCA5O60264 1052 aaPredicted RBP5.46□□□□□ -1.54
SEMA3A-202ENST00000420047 ERCC3P19447 782 aa5.46□□□□□ -1.54
SEMA3A-202ENST00000420047 AXDND1Q5T1B0 1012 aaPredicted RBP5.46□□□□□ -1.54
SEMA3A-202ENST00000420047 EEF1DP3Q658K8 133 aa5.46□□□□□ -1.54
SEMA3A-202ENST00000420047 DCAF15Q66K64 600 aa5.46□□□□□ -1.54
SEMA3A-202ENST00000420047 LGI4Q8N135 537 aa5.46□□□□□ -1.54
SEMA3A-202ENST00000420047 LZTR1Q8N653 840 aa5.46□□□□□ -1.54
SEMA3A-202ENST00000420047 DVL3Q92997 716 aaPredicted RBP5.46□□□□□ -1.54
SEMA3A-202ENST00000420047 ZBTB8AQ96BR9 441 aa5.46□□□□□ -1.54
SEMA3A-202ENST00000420047 TM9SF2Q99805 663 aa5.46□□□□□ -1.54
SEMA3A-202ENST00000420047 ARHGEF40Q8TER5 1519 aa5.46□□□□□ -1.54
SEMA3A-202ENST00000420047 CDC42BPAQ5VT25 1732 aa5.45□□□□□ -1.54
SEMA3A-202ENST00000420047 CD3EP07766 207 aa5.45□□□□□ -1.54
SEMA3A-202ENST00000420047 ITGA4P13612 1032 aa5.45□□□□□ -1.54
SEMA3A-202ENST00000420047 IFNGR1P15260 489 aa5.45□□□□□ -1.54
SEMA3A-202ENST00000420047 TAGLNQ01995 201 aaKnown RBP5.45□□□□□ -1.54
SEMA3A-202ENST00000420047 FAM26FQ5R3K3 315 aa5.45□□□□□ -1.54
SEMA3A-202ENST00000420047 FAM124AQ86V42 546 aa5.45□□□□□ -1.54
SEMA3A-202ENST00000420047 PPFIBP1Q86W92 1011 aa5.45□□□□□ -1.54
SEMA3A-202ENST00000420047 CHST13Q8NET6 341 aa5.45□□□□□ -1.54
SEMA3A-202ENST00000420047 ZNF451Q9Y4E5 1061 aa5.45□□□□□ -1.54
SEMA3A-202ENST00000420047 CEP162Q5TB80 1403 aa5.45□□□□□ -1.54
SEMA3A-202ENST00000420047 SPAG9O60271 1321 aaKnown RBP5.45□□□□□ -1.54
SEMA3A-202ENST00000420047 MTUS2Q5JR59 1369 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 CCNB3Q8WWL7 1395 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 ZMYM4Q5VZL5 1548 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 FAM86C2PA6NEL3 165 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 CYP2C8P10632 490 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 RPL13P26373 211 aaKnown RBP5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 GDF5P43026 501 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 TCEAL1Q15170 157 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 RGL3Q3MIN7 710 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 C9orf84Q5VXU9 1444 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 TDRD10Q5VZ19 366 aaKnown RBP5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 BORAQ6PGQ7 559 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 SAMD9LQ8IVG5 1584 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 SSBP3Q9BWW4 388 aaPredicted RBP5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 NOL6Q9H6R4 1146 aaKnown RBP5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 BCAS3Q9H6U6 928 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 DIP2CQ9Y2E4 1556 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 KIDINS220Q9ULH0 1771 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 ABCA6Q8N139 1617 aa5.44□□□□□ -1.54
SEMA3A-202ENST00000420047 FER1L4A9Z1Z3 1794 aa5.43□□□□□ -1.54
SEMA3A-202ENST00000420047 KIF3BO15066 747 aa5.43□□□□□ -1.54
SEMA3A-202ENST00000420047 TACR2P21452 398 aa5.43□□□□□ -1.54
SEMA3A-202ENST00000420047 HMGA2P52926 109 aa5.43□□□□□ -1.54
SEMA3A-202ENST00000420047 FBXO41Q8TF61 875 aa5.43□□□□□ -1.54
SEMA3A-202ENST00000420047 RNF34Q969K3 372 aa5.43□□□□□ -1.54
SEMA3A-202ENST00000420047 MTA3Q9BTC8 594 aa5.43□□□□□ -1.54
SEMA3A-202ENST00000420047 RXFP1Q9HBX9 757 aa5.43□□□□□ -1.54
SEMA3A-202ENST00000420047 INVSQ9Y283 1065 aa5.43□□□□□ -1.54
SEMA3A-202ENST00000420047 MAGI2Q86UL8 1455 aa5.43□□□□□ -1.54
SEMA3A-202ENST00000420047 SYCP2Q9BX26 1530 aa5.43□□□□□ -1.54
SEMA3A-202ENST00000420047 SUPT6HQ7KZ85 1726 aaKnown RBP5.43□□□□□ -1.54
SEMA3A-202ENST00000420047 ZMYM3Q14202 1370 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 CFAP74Q9C0B2 1584 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 MROH6A6NGR9 719 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 CYR61O00622 381 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 AURKAO14965 403 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 TP53P04637 393 aaPredicted RBP5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 C6P13671 934 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 THBS2P35442 1172 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 SMAD4Q13485 552 aaKnown RBP5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 GLB1LQ6UWU2 654 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 KIAA0825Q8IV33 1275 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 RBBP8NLQ8NC74 664 aaPredicted RBP5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 DDX11Q96FC9 970 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 ZDHHC15Q96MV8 337 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 C11orf84Q9BUA3 381 aaPredicted RBP5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 ZNF214Q9UL59 606 aaPredicted RBP5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 TSC22D4Q9Y3Q8 395 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 RWDD3Q9Y3V2 267 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 ZNF518AQ6AHZ1 1483 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 FYCO1Q9BQS8 1478 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 MLH3Q9UHC1 1453 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 ITSN2Q9NZM3 1697 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 ABCC1P33527 1531 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 KDM5CP41229 1560 aa5.42□□□□□ -1.54
SEMA3A-202ENST00000420047 PREX2Q70Z35 1606 aa5.41□□□□□ -1.54
SEMA3A-202ENST00000420047 CCDC18Q5T9S5 1454 aa5.41□□□□□ -1.54
SEMA3A-202ENST00000420047 TRBV23OR9-2A0A075B6M9 112 aa5.41□□□□□ -1.54
SEMA3A-202ENST00000420047 OVOL3O00110 214 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms