RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 MAD2L2Q9UI95 211 aa20.11■□□□□ 0.81
PTCD1-202ENST00000419981 SUPT16HQ9Y5B9 1047 aaKnown RBP20.11■□□□□ 0.81
PTCD1-202ENST00000419981 PCDHA11Q9Y5I1 949 aa20.11■□□□□ 0.81
PTCD1-202ENST00000419981 U3KPZ7 1027 aaPredicted RBP20.11■□□□□ 0.81
PTCD1-202ENST00000419981 ZBTB5O15062 677 aa20.1■□□□□ 0.81
PTCD1-202ENST00000419981 EIF3JO75822 258 aaKnown RBP20.1■□□□□ 0.81
PTCD1-202ENST00000419981 NR3C2P08235 984 aa20.1■□□□□ 0.81
PTCD1-202ENST00000419981 IQCF3P0C7M6 154 aa20.1■□□□□ 0.81
PTCD1-202ENST00000419981 PPP2R2DQ66LE6 453 aa20.1■□□□□ 0.81
PTCD1-202ENST00000419981 CCDC155Q8N6L0 562 aa20.1■□□□□ 0.81
PTCD1-202ENST00000419981 PPM1EQ8WY54 764 aa20.1■□□□□ 0.81
PTCD1-202ENST00000419981 SYMPKQ92797 1274 aaKnown RBP20.1■□□□□ 0.81
PTCD1-202ENST00000419981 DDX41Q9UJV9 622 aaKnown RBP20.1■□□□□ 0.81
PTCD1-202ENST00000419981 MRVI1Q9Y6F6 885 aa20.1■□□□□ 0.81
PTCD1-202ENST00000419981 TCF20Q9UGU0 1960 aaKnown RBP20.1■□□□□ 0.81
PTCD1-202ENST00000419981 SIP14410 1827 aa20.09■□□□□ 0.81
PTCD1-202ENST00000419981 ERICH2A1L162 156 aa20.09■□□□□ 0.81
PTCD1-202ENST00000419981 PALM3A6NDB9 673 aaPredicted RBP20.09■□□□□ 0.81
PTCD1-202ENST00000419981 OPLAHO14841 1288 aa20.09■□□□□ 0.81
PTCD1-202ENST00000419981 CYP21A2P08686 494 aa20.09■□□□□ 0.81
PTCD1-202ENST00000419981 CASTP20810 708 aaKnown RBP20.09■□□□□ 0.81
PTCD1-202ENST00000419981 GHRHRQ02643 423 aa20.09■□□□□ 0.81
PTCD1-202ENST00000419981 PTGISQ16647 500 aa20.09■□□□□ 0.81
PTCD1-202ENST00000419981 DGKDQ16760 1214 aa20.09■□□□□ 0.81
PTCD1-202ENST00000419981 SESTD1Q86VW0 696 aa20.09■□□□□ 0.81
PTCD1-202ENST00000419981 MAP3K20Q9NYL2 800 aaKnown RBP20.09■□□□□ 0.81
PTCD1-202ENST00000419981 PCDHA1Q9Y5I3 950 aa20.09■□□□□ 0.81
PTCD1-202ENST00000419981 CHD7Q9P2D1 2997 aa20.09■□□□□ 0.81
PTCD1-202ENST00000419981 PPP1R11O60927 126 aaPredicted RBP20.08■□□□□ 0.81
PTCD1-202ENST00000419981 MYOGP15173 224 aa20.08■□□□□ 0.81
PTCD1-202ENST00000419981 IGFBP4P22692 258 aa20.08■□□□□ 0.81
PTCD1-202ENST00000419981 CHMLP26374 656 aa20.08■□□□□ 0.81
PTCD1-202ENST00000419981 PTH1RQ03431 593 aa20.08■□□□□ 0.81
PTCD1-202ENST00000419981 ADGRE1Q14246 886 aa20.08■□□□□ 0.81
PTCD1-202ENST00000419981 GRM4Q14833 912 aa20.08■□□□□ 0.81
PTCD1-202ENST00000419981 RALYLQ86SE5 291 aaKnown RBP20.08■□□□□ 0.81
PTCD1-202ENST00000419981 HOMER1Q86YM7 354 aa20.08■□□□□ 0.81
PTCD1-202ENST00000419981 SAMD3Q8N6K7 520 aa20.08■□□□□ 0.81
PTCD1-202ENST00000419981 CAGE1Q8TC20 777 aa20.08■□□□□ 0.81
PTCD1-202ENST00000419981 KAT2BQ92831 832 aa20.08■□□□□ 0.81
PTCD1-202ENST00000419981 EMID1Q96A84 441 aaPredicted RBP20.08■□□□□ 0.81
PTCD1-202ENST00000419981 SLC9A7Q96T83 725 aa20.08■□□□□ 0.81
PTCD1-202ENST00000419981 FTOQ9C0B1 505 aaKnown RBP eCLIP20.08■□□□□ 0.81
PTCD1-202ENST00000419981 IFIT3O14879 490 aaKnown RBP20.07■□□□□ 0.8
PTCD1-202ENST00000419981 MYCLP12524 364 aaPredicted RBP20.07■□□□□ 0.8
PTCD1-202ENST00000419981 TRAF1Q13077 416 aa20.07■□□□□ 0.8
PTCD1-202ENST00000419981 LAMC2Q13753 1193 aa20.07■□□□□ 0.8
PTCD1-202ENST00000419981 WTAPQ15007 396 aa20.07■□□□□ 0.8
PTCD1-202ENST00000419981 SART3Q15020 963 aaKnown RBP20.07■□□□□ 0.8
PTCD1-202ENST00000419981 GDF6Q6KF10 455 aaPredicted RBP20.07■□□□□ 0.8
PTCD1-202ENST00000419981 NCOA7Q8NI08 942 aa20.07■□□□□ 0.8
PTCD1-202ENST00000419981 PDCD2LQ9BRP1 358 aa20.07■□□□□ 0.8
PTCD1-202ENST00000419981 KATNAL1Q9BW62 490 aa20.07■□□□□ 0.8
PTCD1-202ENST00000419981 HOXA13P31271 388 aaPredicted RBP20.06■□□□□ 0.8
PTCD1-202ENST00000419981 PGM5Q15124 567 aa20.06■□□□□ 0.8
PTCD1-202ENST00000419981 TMEM67Q5HYA8 995 aa20.06■□□□□ 0.8
PTCD1-202ENST00000419981 TJAP1Q5JTD0 557 aa20.06■□□□□ 0.8
PTCD1-202ENST00000419981 STOX1Q6ZVD7 989 aa20.06■□□□□ 0.8
PTCD1-202ENST00000419981 NLRC5Q86WI3 1866 aa20.06■□□□□ 0.8
PTCD1-202ENST00000419981 DHX37Q8IY37 1157 aaKnown RBP20.06■□□□□ 0.8
PTCD1-202ENST00000419981 PPTC7Q8NI37 304 aa20.06■□□□□ 0.8
PTCD1-202ENST00000419981 AFAP1L1Q8TED9 768 aa20.06■□□□□ 0.8
PTCD1-202ENST00000419981 RIOX1Q9H6W3 641 aa20.06■□□□□ 0.8
PTCD1-202ENST00000419981 PRDM6Q9NQX0 595 aa20.06■□□□□ 0.8
PTCD1-202ENST00000419981 GTF2IRD1Q9UHL9 959 aa20.06■□□□□ 0.8
PTCD1-202ENST00000419981 VCANP13611 3396 aa20.05■□□□□ 0.8
PTCD1-202ENST00000419981 E7EWF7 191 aa20.05■□□□□ 0.8
PTCD1-202ENST00000419981 PSEN2P49810 448 aa20.05■□□□□ 0.8
PTCD1-202ENST00000419981 KCNV1Q6PIU1 500 aa20.05■□□□□ 0.8
PTCD1-202ENST00000419981 PHOSPHO2Q8TCD6 241 aa20.05■□□□□ 0.8
PTCD1-202ENST00000419981 CTAGE1Q96RT6 745 aa20.05■□□□□ 0.8
PTCD1-202ENST00000419981 PIGSQ96S52 555 aa20.05■□□□□ 0.8
PTCD1-202ENST00000419981 ALG1Q9BT22 464 aa20.05■□□□□ 0.8
PTCD1-202ENST00000419981 THEGQ9P2T0 379 aa20.05■□□□□ 0.8
PTCD1-202ENST00000419981 TRANK1O15050 2925 aa20.04■□□□□ 0.8
PTCD1-202ENST00000419981 GCOM1H8Y6P7 765 aaPredicted RBP20.04■□□□□ 0.8
PTCD1-202ENST00000419981 SGSM2O43147 1006 aa20.04■□□□□ 0.8
PTCD1-202ENST00000419981 BAIAP3O94812 1187 aa20.04■□□□□ 0.8
PTCD1-202ENST00000419981 F2P00734 622 aa20.04■□□□□ 0.8
PTCD1-202ENST00000419981 CA3P07451 260 aa20.04■□□□□ 0.8
PTCD1-202ENST00000419981 POLR2MP0CAP2 368 aa20.04■□□□□ 0.8
PTCD1-202ENST00000419981 ZNF286BP0CG31 522 aa20.04■□□□□ 0.8
PTCD1-202ENST00000419981 MFSD10Q14728 455 aa20.04■□□□□ 0.8
PTCD1-202ENST00000419981 CCDC85BQ15834 202 aaPredicted RBP20.04■□□□□ 0.8
PTCD1-202ENST00000419981 SLC35G1Q2M3R5 365 aa20.04■□□□□ 0.8
PTCD1-202ENST00000419981 C7orf31Q8N865 590 aa20.04■□□□□ 0.8
PTCD1-202ENST00000419981 SENP2Q9HC62 589 aa20.04■□□□□ 0.8
PTCD1-202ENST00000419981 HDAC6Q9UBN7 1215 aa20.04■□□□□ 0.8
PTCD1-202ENST00000419981 PRRC2BQ5JSZ5 2229 aaKnown RBP20.04■□□□□ 0.8
PTCD1-202ENST00000419981 REV3LO60673 3130 aa20.04■□□□□ 0.8
PTCD1-202ENST00000419981 CYTH3O43739 400 aa20.03■□□□□ 0.8
PTCD1-202ENST00000419981 RGS20O76081 388 aa20.03■□□□□ 0.8
PTCD1-202ENST00000419981 PARNO95453 639 aaKnown RBP20.03■□□□□ 0.8
PTCD1-202ENST00000419981 SELPP16109 830 aa20.03■□□□□ 0.8
PTCD1-202ENST00000419981 CCND2P30279 289 aa20.03■□□□□ 0.8
PTCD1-202ENST00000419981 IRX6P78412 446 aaPredicted RBP20.03■□□□□ 0.8
PTCD1-202ENST00000419981 RBL2Q08999 1139 aa20.03■□□□□ 0.8
PTCD1-202ENST00000419981 TROAPQ12815 778 aa20.03■□□□□ 0.8
PTCD1-202ENST00000419981 KIAA0753Q2KHM9 967 aa20.03■□□□□ 0.8
PTCD1-202ENST00000419981 LRRC8DQ7L1W4 858 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms