RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 USP17L6PQ6QN14 398 aa11.14□□□□□ -0.63
CTSA-205ENST00000419493 TMTC3Q6ZXV5 915 aa11.14□□□□□ -0.63
CTSA-205ENST00000419493 HEATR3Q7Z4Q2 680 aa11.14□□□□□ -0.63
CTSA-205ENST00000419493 DHX37Q8IY37 1157 aaKnown RBP11.14□□□□□ -0.63
CTSA-205ENST00000419493 BRF1Q92994 677 aa11.14□□□□□ -0.63
CTSA-205ENST00000419493 PPP1R12CQ9BZL4 782 aa11.14□□□□□ -0.63
CTSA-205ENST00000419493 PSTPIP2Q9H939 334 aa11.14□□□□□ -0.63
CTSA-205ENST00000419493 LRRC37A2A6NM11 1700 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 A6NJR5 290 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 KIAA0355O15063 1070 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 SORBS3O60504 671 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 KPNA6O60684 536 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 ITGB8P26012 769 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 GHRHRQ02643 423 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 GNPTABQ3T906 1256 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 CCDC62Q6P9F0 684 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 KCNV1Q6PIU1 500 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 VSIG10LQ86VR7 867 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 FAM126BQ8IXS8 530 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 AFG1LQ8WV93 481 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 GPKOWQ92917 476 aaPredicted RBP eCLIP11.13□□□□□ -0.63
CTSA-205ENST00000419493 MTG1Q9BT17 334 aaPredicted RBP11.13□□□□□ -0.63
CTSA-205ENST00000419493 SEZ6LQ9BYH1 1024 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 RTEL1Q9NZ71 1219 aa11.13□□□□□ -0.63
CTSA-205ENST00000419493 DDX41Q9UJV9 622 aaKnown RBP11.13□□□□□ -0.63
CTSA-205ENST00000419493 V9GY48 417 aaPredicted RBP11.13□□□□□ -0.63
CTSA-205ENST00000419493 CEP290O15078 2479 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 CCDC196A0A1B0GTZ2 297 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 TIMP1P01033 207 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 RPS6KB1P23443 525 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 METAP2P50579 478 aaKnown RBP eCLIP11.12□□□□□ -0.63
CTSA-205ENST00000419493 NAPAP54920 295 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 FPGSQ05932 587 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 LAMC2Q13753 1193 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 SHHQ15465 462 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 NBPF20Q3BBV1 942 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 TMEM199Q8N511 208 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 IL31RAQ8NI17 732 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 PPP1R13LQ8WUF5 828 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 KCNB2Q92953 911 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 LRCH3Q96II8 777 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 USP26Q9BXU7 913 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 TRPV6Q9H1D0 765 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 MLXIPQ9HAP2 919 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 CYP46A1Q9Y6A2 500 aa11.12□□□□□ -0.63
CTSA-205ENST00000419493 GRIN2DO15399 1336 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 SPDYE3A6NKU9 549 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 SOX1O00570 391 aaPredicted RBP11.11□□□□□ -0.63
CTSA-205ENST00000419493 MEIS2O14770 477 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 EPB41L2O43491 1005 aaKnown RBP11.11□□□□□ -0.63
CTSA-205ENST00000419493 B4GALT4O60513 344 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 STAM2O75886 525 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 SUPT20HL2P0C7V6 817 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 TGFB3P10600 412 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 CDC27P30260 824 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 ADD1P35611 737 aaKnown RBP11.11□□□□□ -0.63
CTSA-205ENST00000419493 AKAP17AQ02040 695 aaKnown RBP11.11□□□□□ -0.63
CTSA-205ENST00000419493 ARHGAP1Q07960 439 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 DGKDQ16760 1214 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 UBE2SQ16763 222 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 RUFY3Q7L099 469 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 SLC43A3Q8NBI5 491 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 SPATA33Q96N06 139 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 HIPK3Q9H422 1215 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 NOD1Q9Y239 953 aa11.11□□□□□ -0.63
CTSA-205ENST00000419493 CNTNAP5Q8WYK1 1306 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 PIK3CDO00329 1044 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 NOP56O00567 594 aaKnown RBP11.1□□□□□ -0.63
CTSA-205ENST00000419493 RGS20O76081 388 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 GGPS1O95749 300 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 CD4P01730 458 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 MMP3P08254 477 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 CYP2C18P33260 490 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 RCAN1P53805 252 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 CCT2P78371 535 aaKnown RBP11.1□□□□□ -0.63
CTSA-205ENST00000419493 MRPS9P82933 396 aaKnown RBP11.1□□□□□ -0.63
CTSA-205ENST00000419493 LRIT3Q3SXY7 679 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 C9orf50Q5SZB4 431 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 CELF3Q5SZQ8 465 aaKnown RBP11.1□□□□□ -0.63
CTSA-205ENST00000419493 WWC2Q6AWC2 1192 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 MFSD5Q6N075 450 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 NLRX1Q86UT6 975 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 RNPC3Q96LT9 517 aaKnown RBP11.1□□□□□ -0.63
CTSA-205ENST00000419493 ALG1Q9BT22 464 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 ALDH8A1Q9H2A2 487 aaPredicted RBP11.1□□□□□ -0.63
CTSA-205ENST00000419493 EHMT1Q9H9B1 1298 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 TRMT13Q9NUP7 481 aaKnown RBP11.1□□□□□ -0.63
CTSA-205ENST00000419493 TBX21Q9UL17 535 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 PCDHA6Q9UN73 950 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 PCDHA8Q9Y5H6 950 aa11.1□□□□□ -0.63
CTSA-205ENST00000419493 KIAA1217Q5T5P2 1943 aa11.09□□□□□ -0.63
CTSA-205ENST00000419493 SMCO2A6NFE2 343 aa11.09□□□□□ -0.63
CTSA-205ENST00000419493 PPFIA3O75145 1194 aa11.09□□□□□ -0.63
CTSA-205ENST00000419493 PPFIA4O75335 1185 aa11.09□□□□□ -0.63
CTSA-205ENST00000419493 CYP2C9P11712 490 aa11.09□□□□□ -0.63
CTSA-205ENST00000419493 CSF2RAP15509 400 aa11.09□□□□□ -0.63
CTSA-205ENST00000419493 CCL23P55773 120 aa11.09□□□□□ -0.63
CTSA-205ENST00000419493 SP2Q02086 613 aa11.09□□□□□ -0.63
CTSA-205ENST00000419493 PPIGQ13427 754 aaKnown RBP eCLIP11.09□□□□□ -0.631e-7■■□□□ 12.9
CTSA-205ENST00000419493 NEDD9Q14511 834 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms