RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 ZBBXA8MT70 800 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 KLRF2D3W0D1 207 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 CPLX1O14810 134 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 CDKL5O76039 1030 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 XRCC5P13010 732 aaKnown RBP7.79□□□□□ -1.16
LINC02539-202ENST00000419220 XBP1P17861 261 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 RFX1P22670 979 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 NR1H3Q13133 447 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 SHROOM1Q2M3G4 852 aaPredicted RBP7.79□□□□□ -1.16
LINC02539-202ENST00000419220 MFSD14CQ5VZR4 134 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 SNRNP48Q6IEG0 339 aaKnown RBP7.79□□□□□ -1.16
LINC02539-202ENST00000419220 OTOP1Q7RTM1 612 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 SGMS1Q86VZ5 419 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 SKAP1Q86WV1 359 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 TEX2Q8IWB9 1127 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 ZNF654Q8IZM8 581 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 CPXCR1Q8N123 301 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 FBXL16Q8N461 479 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 IGDCC4Q8TDY8 1250 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 CCDC12Q8WUD4 166 aaPredicted RBP7.79□□□□□ -1.16
LINC02539-202ENST00000419220 ATG4CQ96DT6 458 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 RRP36Q96EU6 259 aaKnown RBP7.79□□□□□ -1.16
LINC02539-202ENST00000419220 MMP19Q99542 508 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 IL25Q9H293 177 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 ACAD9Q9H845 621 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 PDRG1Q9NUG6 133 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 ADD3Q9UEY8 706 aaKnown RBP7.79□□□□□ -1.16
LINC02539-202ENST00000419220 CCPG1Q9ULG6 757 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 ADAMTS5Q9UNA0 930 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 PTPN22Q9Y2R2 807 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 SNX14Q9Y5W7 946 aa7.79□□□□□ -1.16
LINC02539-202ENST00000419220 ABCB11O95342 1321 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 LOC102724159A0A0B4J2E5 919 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 hCG_1984214I3L0E3 225 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 SMIM22K7EJ46 135 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 SH2B2O14492 632 aaPredicted RBP7.78□□□□□ -1.16
LINC02539-202ENST00000419220 ICAM1P05362 532 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 SNHG28P0DPA3 235 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 ERCC3P19447 782 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 RPS6KB1P23443 525 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 GRK4P32298 578 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 METAP2P50579 478 aaKnown RBP eCLIP7.78□□□□□ -1.16
LINC02539-202ENST00000419220 GRM4Q14833 912 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 PWP2Q15269 919 aaKnown RBP7.78□□□□□ -1.16
LINC02539-202ENST00000419220 SEC23AQ15436 765 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 Q6ZUG5 572 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 CYB5R4Q7L1T6 521 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 CHST3Q7LGC8 479 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 GPR142Q7Z601 462 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 FBXO11Q86XK2 927 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 CLEC10AQ8IUN9 316 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 TRIM22Q8IYM9 498 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 MSL3Q8N5Y2 521 aaKnown RBP7.78□□□□□ -1.16
LINC02539-202ENST00000419220 ZNF713Q8N859 430 aaPredicted RBP7.78□□□□□ -1.16
LINC02539-202ENST00000419220 FANCBQ8NB91 859 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 CUL5Q93034 780 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 TRERF1Q96PN7 1200 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 NUP88Q99567 741 aaPredicted RBP7.78□□□□□ -1.16
LINC02539-202ENST00000419220 AMNQ9BXJ7 453 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 C22orf23Q9BZE7 217 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 EHMT1Q9H9B1 1298 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 LY9Q9HBG7 655 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 PRR12Q9ULL5 1215 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 DIS3Q9Y2L1 958 aaKnown RBP7.78□□□□□ -1.16
LINC02539-202ENST00000419220 MGAMO43451 1857 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 FRMPD2Q68DX3 1309 aaPredicted RBP7.78□□□□□ -1.16
LINC02539-202ENST00000419220 ADGRA2Q96PE1 1338 aa7.78□□□□□ -1.16
LINC02539-202ENST00000419220 PNMA6FA0A0J9YX94 578 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 KLF18A0A0U1RQI7 1052 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 PALM3A6NDB9 673 aaPredicted RBP7.77□□□□□ -1.17
LINC02539-202ENST00000419220 ASB14A6NK59 587 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 ZBTB5O15062 677 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 ADCY3O60266 1144 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 ALAS1P13196 640 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 MCM2P49736 904 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 FLT3LGP49771 235 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 GSK3AP49840 483 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 EXOSC10Q01780 885 aaKnown RBP7.77□□□□□ -1.17
LINC02539-202ENST00000419220 TMEM132BQ14DG7 1078 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 RTN1Q16799 776 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 LINC01559Q495D7 138 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 MCTP2Q6DN12 878 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 CCDC174Q6PII3 467 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 RGS22Q8NE09 1264 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 WASF1Q92558 559 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 ZNF274Q96GC6 653 aaPredicted RBP7.77□□□□□ -1.17
LINC02539-202ENST00000419220 UCN2Q96RP3 112 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 APBA2Q99767 749 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 MOV10L1Q9BXT6 1211 aaKnown RBP7.77□□□□□ -1.17
LINC02539-202ENST00000419220 ALDH8A1Q9H2A2 487 aaPredicted RBP7.77□□□□□ -1.17
LINC02539-202ENST00000419220 RANBP17Q9H2T7 1088 aaKnown RBP7.77□□□□□ -1.17
LINC02539-202ENST00000419220 VAT1LQ9HCJ6 419 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 CNPY2Q9Y2B0 182 aa7.77□□□□□ -1.17
LINC02539-202ENST00000419220 MYH6P13533 1939 aa7.76□□□□□ -1.17
LINC02539-202ENST00000419220 GOLGA8AA7E2F4 631 aa7.76□□□□□ -1.17
LINC02539-202ENST00000419220 GOLGA8BA8MQT2 603 aa7.76□□□□□ -1.17
LINC02539-202ENST00000419220 MSCO60682 206 aa7.76□□□□□ -1.17
LINC02539-202ENST00000419220 HMGCRP04035 888 aa7.76□□□□□ -1.17
LINC02539-202ENST00000419220 VSIG8P0DPA2 414 aa7.76□□□□□ -1.17
LINC02539-202ENST00000419220 CYP2B6P20813 491 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms