RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SLC38A3Q99624 504 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 DHRS4Q9BTZ2 278 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 JAM3Q9BX67 310 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 EPB41L4AQ9HCS5 686 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 SIRT5Q9NXA8 310 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 USP35Q9P2H5 1018 aa6.82□□□□□ -1.32
HMGB1P49-201ENST00000418882 MYO1BO43795 1136 aa6.81□□□□□ -1.32
HMGB1P49-201ENST00000418882 MC3RP41968 323 aa6.81□□□□□ -1.32
HMGB1P49-201ENST00000418882 GPR85P60893 370 aa6.81□□□□□ -1.32
HMGB1P49-201ENST00000418882 CABP7Q86V35 215 aa6.81□□□□□ -1.32
HMGB1P49-201ENST00000418882 TMEFF1Q8IYR6 380 aa6.81□□□□□ -1.32
HMGB1P49-201ENST00000418882 SH3TC2Q8TF17 1288 aa6.81□□□□□ -1.32
HMGB1P49-201ENST00000418882 MZB1Q8WU39 189 aa6.81□□□□□ -1.32
HMGB1P49-201ENST00000418882 TSPAN17Q96FV3 270 aa6.81□□□□□ -1.32
HMGB1P49-201ENST00000418882 MRFAP1L1Q96HT8 127 aa6.81□□□□□ -1.32
HMGB1P49-201ENST00000418882 GOLGA2P5Q9HBQ8 144 aa6.81□□□□□ -1.32
HMGB1P49-201ENST00000418882 SMG5Q9UPR3 1016 aaKnown RBP6.81□□□□□ -1.32
HMGB1P49-201ENST00000418882 H7BY64 318 aa6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 IRS4O14654 1257 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 N4BP3O15049 544 aa6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 ASGR2P07307 311 aa6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 TMEM253P0C7T8 217 aa6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 ATF2P15336 505 aa6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 IGFBP6P24592 240 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 PMLP29590 882 aa6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 GTF2A2P52657 109 aa6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 BHLHE22Q8NFJ8 381 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 PANK1Q8TE04 598 aa6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 PPP1R16BQ96T49 567 aa6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 SYT3Q9BQG1 590 aa6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 SLC52A2Q9HAB3 445 aa6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 DBR1Q9UK59 544 aaKnown RBP6.8□□□□□ -1.32
HMGB1P49-201ENST00000418882 NPIPB6E9PJ23 425 aa6.79□□□□□ -1.32
HMGB1P49-201ENST00000418882 NFIBO00712 420 aa6.79□□□□□ -1.32
HMGB1P49-201ENST00000418882 RAP1GAPP47736 663 aa6.79□□□□□ -1.32
HMGB1P49-201ENST00000418882 TMEM62Q0P6H9 643 aa6.79□□□□□ -1.32
HMGB1P49-201ENST00000418882 MROH9Q5TGP6 573 aa6.79□□□□□ -1.32
HMGB1P49-201ENST00000418882 IFNL3Q8IZI9 196 aa6.79□□□□□ -1.32
HMGB1P49-201ENST00000418882 SLC7A14Q8TBB6 771 aa6.79□□□□□ -1.32
HMGB1P49-201ENST00000418882 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.79□□□□□ -1.32
HMGB1P49-201ENST00000418882 PEX11GQ96HA9 241 aa6.79□□□□□ -1.32
HMGB1P49-201ENST00000418882 RNPC3Q96LT9 517 aaKnown RBP6.79□□□□□ -1.32
HMGB1P49-201ENST00000418882 PALD1Q9ULE6 856 aa6.79□□□□□ -1.32
HMGB1P49-201ENST00000418882 GRK2P25098 689 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 GRK3P35626 688 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 SLC6A11P48066 632 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 LINC00310P59036 64 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 KCNA10Q16322 511 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 OLFML2BQ68BL8 750 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 JAZF1Q86VZ6 243 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 C1QL4Q86Z23 238 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 DCP2Q8IU60 420 aaKnown RBP6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 ZSWIM2Q8NEG5 633 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 ALG3Q92685 438 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 PTPRN2Q92932 1015 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 ZFYVE21Q9BQ24 234 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 IPPKQ9H8X2 491 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 PCDHA8Q9Y5H6 950 aa6.78□□□□□ -1.32
HMGB1P49-201ENST00000418882 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 TCAF2A6NFQ2 919 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 BUB1BO60566 1050 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 SOD2P04179 222 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 COL6A2P12110 1019 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 PI3P19957 117 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 LIMS1P48059 325 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 KIZQ2M2Z5 673 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 MAMDC2Q7Z304 686 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 GSTCDQ8NEC7 633 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 PIP4K2CQ8TBX8 421 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 SCLYQ96I15 445 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 KCNJ15Q99712 375 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 EPB41L1Q9H4G0 881 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 NDOR1Q9UHB4 597 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 NUDT5Q9UKK9 219 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 COA3Q9Y2R0 106 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 PCDHA9Q9Y5H5 950 aa6.77□□□□□ -1.33
HMGB1P49-201ENST00000418882 ESYT3A0FGR9 886 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 NKRFO15226 690 aaKnown RBP eCLIP6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 IGSF3O75054 1194 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 TADA3O75528 432 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 RASGRP1O95267 797 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 CRTAMO95727 393 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 CFPP27918 469 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 GABREP78334 506 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 PKN1Q16512 942 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 TRIM61Q5EBN2 209 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 ZC3H12BQ5HYM0 836 aaKnown RBP6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 EMC4Q5J8M3 183 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 FGD2Q7Z6J4 655 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 MILR1Q7Z6M3 343 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 RBM12BQ8IXT5 1001 aaKnown RBP6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 FAM26EQ8N5C1 309 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 PCDH19Q8TAB3 1148 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 SEC14L1Q92503 715 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 SIGLEC10Q96LC7 697 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 CLUHP3Q96NS8 147 aa6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 NCOA5Q9HCD5 579 aaKnown RBP6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 MRPL42Q9Y6G3 142 aaKnown RBP6.76□□□□□ -1.33
HMGB1P49-201ENST00000418882 TCRBV5S2A0A599 114 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms