RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 GPT2Q8TD30 523 aa15.04■□□□□ -0
HLA-DMB-258ENST00000418107 SYAP1Q96A49 352 aaPredicted RBP15.04■□□□□ -0
HLA-DMB-258ENST00000418107 RIOX1Q9H6W3 641 aa15.04■□□□□ -0
HLA-DMB-258ENST00000418107 VCPKMTQ9H867 229 aa15.04■□□□□ -0
HLA-DMB-258ENST00000418107 TMX2Q9Y320 296 aa15.04■□□□□ -0
HLA-DMB-258ENST00000418107 NDUFB10O96000 172 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 PGK2P07205 417 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 BMP3P12645 472 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 ATP2B1P20020 1258 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 SLC16A2P36021 539 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 NR5A1Q13285 461 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 SLC35G1Q2M3R5 365 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 C1orf53Q5VUE5 145 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 WWC2Q6AWC2 1192 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 ADGRF4Q8IZF3 695 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 OXER1Q8TDS5 423 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 FTOQ9C0B1 505 aaKnown RBP eCLIP15.03■□□□□ -0
HLA-DMB-258ENST00000418107 XPNPEP3Q9NQH7 507 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 RTEL1Q9NZ71 1219 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 RCOR1Q9UKL0 485 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 NOL7Q9UMY1 257 aaKnown RBP15.03■□□□□ -0
HLA-DMB-258ENST00000418107 PHF24Q9UPV7 400 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 CLIC4Q9Y696 253 aa15.03■□□□□ -0
HLA-DMB-258ENST00000418107 PNMA6FA0A0J9YX94 578 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 TMEM232C9JQI7 657 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 STXBP3O00186 592 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 WDR46O15213 610 aaKnown RBP15.02■□□□□ -0
HLA-DMB-258ENST00000418107 PGK1P00558 417 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 RARBP10826 455 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 ME1P48163 572 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 EPHB4P54760 987 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 BLIDQ8IZY5 108 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 BICD2Q8TD16 824 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 GMCL1Q96IK5 515 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 MMP19Q99542 508 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 NUP88Q99567 741 aaPredicted RBP15.02■□□□□ -0
HLA-DMB-258ENST00000418107 JMJD4Q9H9V9 463 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 C6orf50Q9HD87 102 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 FBXO28Q9NVF7 368 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 BARHL2Q9NY43 387 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 SYNPO2Q9UMS6 1093 aa15.02■□□□□ -0
HLA-DMB-258ENST00000418107 PARP14Q460N5 1801 aa15.02□□□□□ -0.01
HLA-DMB-258ENST00000418107 hCG_1984214I3L0E3 225 aa15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 SPTLC2O15270 562 aa15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 YEATS4O95619 227 aa15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 SLC25A27O95847 323 aa15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 CLTBP09497 229 aa15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 FOSL2P15408 326 aa15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 TAL1P17542 331 aaPredicted RBP15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 RILPL1Q5EBL4 403 aa15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 GALNT17Q6IS24 598 aa15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 FAM177A1Q8N128 213 aaPredicted RBP15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 ZNF713Q8N859 430 aaPredicted RBP15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 KCNG4Q8TDN1 519 aa15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 LENG1Q96BZ8 264 aaPredicted RBP15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 RNPC3Q96LT9 517 aaKnown RBP15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 TINF2Q9BSI4 451 aa15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 POLR3EQ9NVU0 708 aa15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 NRBP1Q9UHY1 535 aa15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 PCDHA4Q9UN74 947 aa15.01□□□□□ -0.01
HLA-DMB-258ENST00000418107 SMCO2A6NFE2 343 aa15□□□□□ -0.01
HLA-DMB-258ENST00000418107 PQBP1O60828 265 aaKnown RBP15□□□□□ -0.01
HLA-DMB-258ENST00000418107 GNA11P29992 359 aa15□□□□□ -0.01
HLA-DMB-258ENST00000418107 KCTD2Q14681 263 aa15□□□□□ -0.01
HLA-DMB-258ENST00000418107 ZNF792Q3KQV3 632 aa15□□□□□ -0.01
HLA-DMB-258ENST00000418107 SYDE2Q5VT97 1194 aa15□□□□□ -0.01
HLA-DMB-258ENST00000418107 RNF180Q86T96 592 aa15□□□□□ -0.01
HLA-DMB-258ENST00000418107 RIOX2Q8IUF8 465 aa15□□□□□ -0.01
HLA-DMB-258ENST00000418107 ADAMTS5Q9UNA0 930 aa15□□□□□ -0.01
HLA-DMB-258ENST00000418107 TTC28Q96AY4 2481 aa15□□□□□ -0.01
HLA-DMB-258ENST00000418107 SMCHD1A6NHR9 2005 aa15□□□□□ -0.01
HLA-DMB-258ENST00000418107 CCDC194A0A1B0GVG4 234 aa14.99□□□□□ -0.01
HLA-DMB-258ENST00000418107 A0A1W2PQ45 241 aaPredicted RBP14.99□□□□□ -0.01
HLA-DMB-258ENST00000418107 A0A1W2PQY0 241 aa14.99□□□□□ -0.01
HLA-DMB-258ENST00000418107 ZBTB5O15062 677 aa14.99□□□□□ -0.01
HLA-DMB-258ENST00000418107 KIAA0355O15063 1070 aa14.99□□□□□ -0.01
HLA-DMB-258ENST00000418107 RAG1P15918 1043 aa14.99□□□□□ -0.01
HLA-DMB-258ENST00000418107 NASPP49321 788 aaPredicted RBP14.99□□□□□ -0.01
HLA-DMB-258ENST00000418107 FAM83BQ5T0W9 1011 aa14.99□□□□□ -0.01
HLA-DMB-258ENST00000418107 LINC00301Q8NCQ3 95 aa14.99□□□□□ -0.01
HLA-DMB-258ENST00000418107 CEP131Q9UPN4 1083 aa14.99□□□□□ -0.01
HLA-DMB-258ENST00000418107 ZNFX1Q9P2E3 1918 aaKnown RBP14.99□□□□□ -0.01
HLA-DMB-258ENST00000418107 VWA5AO00534 786 aa14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 ZNF865P0CJ78 1059 aaPredicted RBP14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 AKR1A1P14550 325 aa14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 STAT3P40763 770 aa14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 GSE1Q14687 1217 aa14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 SLC39A14Q15043 492 aa14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 PIK3AP1Q6ZUJ8 805 aa14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 CHURC1Q8WUH1 139 aa14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 TMEM39AQ9NV64 488 aa14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 ZNF214Q9UL59 606 aaPredicted RBP14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 PPP1R9AQ9ULJ8 1098 aa14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 DIS3Q9Y2L1 958 aaKnown RBP14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 COL11A1P12107 1806 aaPredicted RBP14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 ADAMTS4O75173 837 aa14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 MARCKSP29966 332 aaPredicted RBP14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 ADCY7P51828 1080 aa14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 STAT2P52630 851 aa14.98□□□□□ -0.01
HLA-DMB-258ENST00000418107 FPGSQ05932 587 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms