RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 CDK11BP21127 795 aaKnown RBP18.82■□□□□ 0.6
SSBP3-205ENST00000417664 PTGS1P23219 599 aa18.82■□□□□ 0.6
SSBP3-205ENST00000417664 COBLL1Q53SF7 1204 aa18.82■□□□□ 0.6
SSBP3-205ENST00000417664 FCHSD1Q86WN1 690 aa18.82■□□□□ 0.6
SSBP3-205ENST00000417664 GIMAP8Q8ND71 665 aaPredicted RBP18.82■□□□□ 0.6
SSBP3-205ENST00000417664 MED15Q96RN5 788 aa18.82■□□□□ 0.6
SSBP3-205ENST00000417664 RPAP3Q9H6T3 665 aaPredicted RBP18.82■□□□□ 0.6
SSBP3-205ENST00000417664 CTDP1Q9Y5B0 961 aaPredicted RBP18.82■□□□□ 0.6
SSBP3-205ENST00000417664 KLHL10Q6JEL2 608 aa18.82■□□□□ 0.6
SSBP3-205ENST00000417664 ADSSL1Q8N142 457 aa18.82■□□□□ 0.6
SSBP3-205ENST00000417664 ZKSCAN4Q969J2 545 aaPredicted RBP18.82■□□□□ 0.6
SSBP3-205ENST00000417664 DCPSQ96C86 337 aaKnown RBP18.82■□□□□ 0.6
SSBP3-205ENST00000417664 CTAGE1Q96RT6 745 aa18.82■□□□□ 0.6
SSBP3-205ENST00000417664 EXOC1Q9NV70 894 aa18.82■□□□□ 0.6
SSBP3-205ENST00000417664 CCT6AP40227 531 aaKnown RBP18.81■□□□□ 0.6
SSBP3-205ENST00000417664 ASIC1P78348 528 aa18.81■□□□□ 0.6
SSBP3-205ENST00000417664 SETQ01105 290 aaPredicted RBP18.81■□□□□ 0.6
SSBP3-205ENST00000417664 DPY19L2Q6NUT2 758 aa18.81■□□□□ 0.6
SSBP3-205ENST00000417664 TRMT44Q8IYL2 757 aaKnown RBP18.81■□□□□ 0.6
SSBP3-205ENST00000417664 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.81■□□□□ 0.65e-6■■□□□ 11.5
SSBP3-205ENST00000417664 AGBL1Q96MI9 1066 aa18.81■□□□□ 0.6
SSBP3-205ENST00000417664 MAF1Q9H063 256 aa18.81■□□□□ 0.6
SSBP3-205ENST00000417664 NRBP1Q9UHY1 535 aa18.81■□□□□ 0.6
SSBP3-205ENST00000417664 ZHX2Q9Y6X8 837 aa18.81■□□□□ 0.6
SSBP3-205ENST00000417664 SMCHD1A6NHR9 2005 aa18.8■□□□□ 0.6
SSBP3-205ENST00000417664 IGLV3-22A0A075B6J6 115 aa18.8■□□□□ 0.6
SSBP3-205ENST00000417664 PSMA7O14818 248 aa18.8■□□□□ 0.6
SSBP3-205ENST00000417664 PRCPP42785 496 aa18.8■□□□□ 0.6
SSBP3-205ENST00000417664 OAZ1P54368 228 aa18.8■□□□□ 0.6
SSBP3-205ENST00000417664 SPAG1Q07617 926 aa18.8■□□□□ 0.6
SSBP3-205ENST00000417664 SPIRE1Q08AE8 756 aa18.8■□□□□ 0.6
SSBP3-205ENST00000417664 CDKAL1Q5VV42 579 aa18.8■□□□□ 0.6
SSBP3-205ENST00000417664 UNC13DQ70J99 1090 aa18.8■□□□□ 0.6
SSBP3-205ENST00000417664 SULF1Q8IWU6 871 aa18.8■□□□□ 0.6
SSBP3-205ENST00000417664 SMYD4Q8IYR2 804 aaPredicted RBP18.8■□□□□ 0.6
SSBP3-205ENST00000417664 RBM46Q8TBY0 533 aaKnown RBP18.8■□□□□ 0.6
SSBP3-205ENST00000417664 DHTKD1Q96HY7 919 aaPredicted RBP18.8■□□□□ 0.6
SSBP3-205ENST00000417664 ZNF830Q96NB3 372 aaPredicted RBP18.8■□□□□ 0.6
SSBP3-205ENST00000417664 KCNF1Q9H3M0 494 aa18.8■□□□□ 0.6
SSBP3-205ENST00000417664 SSC5DA1L4H1 1573 aa18.8■□□□□ 0.6
SSBP3-205ENST00000417664 ZC3H4Q9UPT8 1303 aaKnown RBP18.8■□□□□ 0.6
SSBP3-205ENST00000417664 MSH4O15457 936 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 YBX3P16989 372 aaKnown RBP eCLIP18.79■□□□□ 0.6
SSBP3-205ENST00000417664 TAL1P17542 331 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-205ENST00000417664 TPD52L1Q16890 204 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-205ENST00000417664 CEP55Q53EZ4 464 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 PRAMEF18Q5VWM3 479 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 C9orf131Q5VYM1 1079 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 SAMD1Q6SPF0 538 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-205ENST00000417664 KRT26Q7Z3Y9 468 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 CCDC150Q8NCX0 1101 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 NELFBQ8WX92 580 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 CLEC4DQ8WXI8 215 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 TBC1D5Q92609 795 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 L3MBTL3Q96JM7 780 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-205ENST00000417664 NUDT12Q9BQG2 462 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 BMP2KQ9NSY1 1161 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-205ENST00000417664 CTNND2Q9UQB3 1225 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 MYPNQ86TC9 1320 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 VWA5AO00534 786 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 PPP1R12BO60237 982 aaPredicted RBP18.79■□□□□ 0.6
SSBP3-205ENST00000417664 RPA1P27694 616 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 PDE4DQ08499 809 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 PSMD2Q13200 908 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 MCM6Q14566 821 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 CCDC144BQ3MJ40 725 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 LRRC8AQ8IWT6 810 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 ZC3H15Q8WU90 426 aaKnown RBP18.79■□□□□ 0.6
SSBP3-205ENST00000417664 SAMSN1Q9NSI8 373 aaKnown RBP18.79■□□□□ 0.6
SSBP3-205ENST00000417664 TMOD4Q9NZQ9 345 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 GDAQ9Y2T3 454 aa18.79■□□□□ 0.6
SSBP3-205ENST00000417664 RPTORQ8N122 1335 aa18.78■□□□□ 0.6
SSBP3-205ENST00000417664 USP2O75604 605 aaPredicted RBP18.78■□□□□ 0.6
SSBP3-205ENST00000417664 BCRP11274 1271 aa18.78■□□□□ 0.6
SSBP3-205ENST00000417664 MAP3K9P80192 1104 aa18.78■□□□□ 0.6
SSBP3-205ENST00000417664 SH3D19Q5HYK7 790 aa18.78■□□□□ 0.6
SSBP3-205ENST00000417664 USP50Q70EL3 339 aaPredicted RBP18.78■□□□□ 0.6
SSBP3-205ENST00000417664 NIPA1Q7RTP0 329 aa18.78■□□□□ 0.6
SSBP3-205ENST00000417664 FILIP1Q7Z7B0 1213 aa18.78■□□□□ 0.6
SSBP3-205ENST00000417664 ANKRD20A12PQ8NF67 263 aa18.78■□□□□ 0.6
SSBP3-205ENST00000417664 ADAMTS5Q9UNA0 930 aa18.78■□□□□ 0.6
SSBP3-205ENST00000417664 AFG3L2Q9Y4W6 797 aa18.78■□□□□ 0.6
SSBP3-205ENST00000417664 PHIPQ8WWQ0 1821 aa18.77■□□□□ 0.6
SSBP3-205ENST00000417664 BICDL2A1A5D9 508 aa18.77■□□□□ 0.6
SSBP3-205ENST00000417664 MYMKA6NI61 221 aa18.77■□□□□ 0.6
SSBP3-205ENST00000417664 MEIS1O00470 390 aa18.77■□□□□ 0.6
SSBP3-205ENST00000417664 MUTP22033 750 aa18.77■□□□□ 0.6
SSBP3-205ENST00000417664 STX17P56962 302 aa18.77■□□□□ 0.6
SSBP3-205ENST00000417664 COG2Q14746 738 aa18.77■□□□□ 0.6
SSBP3-205ENST00000417664 TMC6Q7Z403 805 aa18.77■□□□□ 0.6
SSBP3-205ENST00000417664 VSTM4Q8IW00 320 aa18.77■□□□□ 0.6
SSBP3-205ENST00000417664 CPXCR1Q8N123 301 aa18.77■□□□□ 0.6
SSBP3-205ENST00000417664 KIAA1524Q8TCG1 905 aa18.77■□□□□ 0.6
SSBP3-205ENST00000417664 NOC3LQ8WTT2 800 aaKnown RBP18.77■□□□□ 0.6
SSBP3-205ENST00000417664 SLC5A5Q92911 643 aa18.77■□□□□ 0.6
SSBP3-205ENST00000417664 POLR3CQ9BUI4 534 aaPredicted RBP18.77■□□□□ 0.6
SSBP3-205ENST00000417664 RAVER2Q9HCJ3 691 aaKnown RBP18.77■□□□□ 0.6
SSBP3-205ENST00000417664 RTN4Q9NQC3 1192 aaKnown RBP18.77■□□□□ 0.6
SSBP3-205ENST00000417664 VAV3Q9UKW4 847 aa18.77■□□□□ 0.6
SSBP3-205ENST00000417664 A0A1B0GTH6 734 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms