RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 A6NJR5 290 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 OPLAHO14841 1288 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 SUPT20HL2P0C7V6 817 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 HOXA13P31271 388 aaPredicted RBP12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 ITGA7Q13683 1181 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 PGM5Q15124 567 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 CXCL17Q6UXB2 119 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 RUFY3Q7L099 469 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 HEATR3Q7Z4Q2 680 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 NLRX1Q86UT6 975 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 TDHQ8IZJ6 230 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 CCDC82Q8N4S0 544 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 BRF1Q92994 677 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 CDHR1Q96JP9 859 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 KATNAL1Q9BW62 490 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 USP26Q9BXU7 913 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 PDLIM7Q9NR12 457 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 COL20A1Q9P218 1284 aa12.6□□□□□ -0.39
SNRNP25-204ENST00000417493 KIAA0355O15063 1070 aa12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 CTAGE5O15320 804 aa12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 FOSP01100 380 aaPredicted RBP12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 MYL3P08590 195 aa12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 CDK7P50613 346 aa12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 NAPAP54920 295 aa12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 ANAPC15P60006 121 aa12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 PTPN11Q06124 597 aaPredicted RBP12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 DGKDQ16760 1214 aa12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 SLC35G1Q2M3R5 365 aa12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 CCDC62Q6P9F0 684 aa12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 DHX37Q8IY37 1157 aaKnown RBP12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 GIMAP8Q8ND71 665 aaPredicted RBP12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 EMID1Q96A84 441 aaPredicted RBP12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 TCEANC2Q96MN5 208 aa12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 AGXT2Q9BYV1 514 aa12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 PRO3102Q9H379 93 aa12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 FRMPD4Q14CM0 1322 aa12.59□□□□□ -0.39
SNRNP25-204ENST00000417493 ADCY7P51828 1080 aa12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 PURAQ00577 322 aaKnown RBP12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 MDM2Q00987 491 aaPredicted RBP12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 APOBRQ0VD83 1088 aa12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 NEDD9Q14511 834 aa12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 ANKRD1Q15327 319 aa12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 PCNX4Q63HM2 1172 aa12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 RAB11FIP4Q86YS3 637 aa12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 TRIM22Q8IYM9 498 aa12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 CMTR1Q8N1G2 835 aaKnown RBP12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 SLC43A3Q8NBI5 491 aa12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 MLXIPQ9HAP2 919 aa12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 ZSWIM6Q9HCJ5 1215 aa12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 DDX41Q9UJV9 622 aaKnown RBP12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 BRPF3Q9ULD4 1205 aa12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 DDX49Q9Y6V7 483 aaKnown RBP12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 V9GY48 417 aaPredicted RBP12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 CNTNAP5Q8WYK1 1306 aa12.58□□□□□ -0.4
SNRNP25-204ENST00000417493 NID2Q14112 1375 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 CPLX1O14810 134 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 MAFGO15525 162 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 FIBPO43427 364 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 TIMP1P01033 207 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 FPGSQ05932 587 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 FAAP100Q0VG06 881 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 PPIGQ13427 754 aaKnown RBP eCLIP12.57□□□□□ -0.49e-6■■□□□ 12.8
SNRNP25-204ENST00000417493 LY6KQ17RY6 165 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 NFRKBQ6P4R8 1299 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 TMEM199Q8N511 208 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 CCDC148Q8NFR7 591 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 PPTC7Q8NI37 304 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 BICD2Q8TD16 824 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 RIC8AQ9NPQ8 531 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 BARHL2Q9NY43 387 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 NOD1Q9Y239 953 aa12.57□□□□□ -0.4
SNRNP25-204ENST00000417493 NOP56O00567 594 aaKnown RBP12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 MEIS2O14770 477 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 PPFIA4O75335 1185 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 CDKL5O76039 1030 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 MMP3P08254 477 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 SCG2P13521 617 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 GNA11P29992 359 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 ICAM3P32942 547 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 EVCP57679 992 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 ARHGAP1Q07960 439 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 AP3B2Q13367 1082 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 PFKFB3Q16875 520 aaPredicted RBP12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 LRIT3Q3SXY7 679 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 USP17L6PQ6QN14 398 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 FAM126BQ8IXS8 530 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 FAM177A1Q8N128 213 aaPredicted RBP12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 CCDC155Q8N6L0 562 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 AFG1LQ8WV93 481 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 GPRASP2Q96D09 838 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 ZNF274Q96GC6 653 aaPredicted RBP12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 INPP4AQ96PE3 977 aaPredicted RBP12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 SENP7Q9BQF6 1050 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 RNF26Q9BY78 433 aaPredicted RBP12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 MTIF3Q9H2K0 278 aaKnown RBP12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 C6orf50Q9HD87 102 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 PDRG1Q9NUG6 133 aa12.56□□□□□ -0.4
SNRNP25-204ENST00000417493 TRIM43BA6NCK2 446 aa12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 PRPF3O43395 683 aaKnown RBP12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 ARIH2O95376 493 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms