RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 AP5M1Q9H0R1 490 aa26.45■■□□□ 1.82
SMARCB1-205ENST00000417137 LCTP09848 1927 aa26.45■■□□□ 1.82
SMARCB1-205ENST00000417137 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.44■■□□□ 1.82
SMARCB1-205ENST00000417137 KBTBD13C9JR72 458 aa26.44■■□□□ 1.82
SMARCB1-205ENST00000417137 DNM1LO00429 736 aa26.44■■□□□ 1.82
SMARCB1-205ENST00000417137 SMPD1P17405 629 aa26.44■■□□□ 1.82
SMARCB1-205ENST00000417137 PCNX4Q63HM2 1172 aa26.44■■□□□ 1.82
SMARCB1-205ENST00000417137 GALNT17Q6IS24 598 aa26.44■■□□□ 1.82
SMARCB1-205ENST00000417137 KCNV1Q6PIU1 500 aa26.44■■□□□ 1.82
SMARCB1-205ENST00000417137 NECAB2Q7Z6G3 386 aa26.44■■□□□ 1.82
SMARCB1-205ENST00000417137 CCDC83Q8IWF9 413 aa26.44■■□□□ 1.82
SMARCB1-205ENST00000417137 NSUN7Q8NE18 718 aaKnown RBP26.44■■□□□ 1.82
SMARCB1-205ENST00000417137 GNEQ9Y223 722 aaKnown RBP26.44■■□□□ 1.82
SMARCB1-205ENST00000417137 PGK1P00558 417 aa26.43■■□□□ 1.82
SMARCB1-205ENST00000417137 TXNP10599 105 aaKnown RBP26.43■■□□□ 1.82
SMARCB1-205ENST00000417137 CLK2P49760 499 aaKnown RBP26.43■■□□□ 1.82
SMARCB1-205ENST00000417137 LRRC41Q15345 812 aa26.43■■□□□ 1.82
SMARCB1-205ENST00000417137 GNPTABQ3T906 1256 aa26.43■■□□□ 1.82
SMARCB1-205ENST00000417137 REXO1Q8N1G1 1221 aaKnown RBP26.43■■□□□ 1.82
SMARCB1-205ENST00000417137 IL31RAQ8NI17 732 aa26.43■■□□□ 1.82
SMARCB1-205ENST00000417137 GJA9P57773 515 aa26.42■■□□□ 1.82
SMARCB1-205ENST00000417137 GJC2Q5T442 439 aaPredicted RBP26.42■■□□□ 1.82
SMARCB1-205ENST00000417137 LENG1Q96BZ8 264 aaPredicted RBP26.42■■□□□ 1.82
SMARCB1-205ENST00000417137 PAWRQ96IZ0 340 aaKnown RBP26.42■■□□□ 1.82
SMARCB1-205ENST00000417137 ALG1Q9BT22 464 aa26.42■■□□□ 1.82
SMARCB1-205ENST00000417137 SYNRGQ9UMZ2 1314 aa26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 DYNC1LI2O43237 492 aaPredicted RBP26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 ADCY6O43306 1168 aa26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 C6orf222P0C671 652 aaPredicted RBP26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 TGFB3P10600 412 aa26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 JAKMIP3Q5VZ66 844 aa26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 TLK2Q86UE8 772 aa26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 NLRX1Q86UT6 975 aa26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 AIFM3Q96NN9 605 aa26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 TSEN34Q9BSV6 310 aaKnown RBP26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 ANO3Q9BYT9 981 aa26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 UPF3AQ9H1J1 476 aaKnown RBP26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 PCDHA4Q9UN74 947 aa26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 MRVI1Q9Y6F6 885 aa26.41■■□□□ 1.82
SMARCB1-205ENST00000417137 MCM3APO60318 1980 aa26.4■■□□□ 1.82
SMARCB1-205ENST00000417137 ADAMTS4O75173 837 aa26.4■■□□□ 1.82
SMARCB1-205ENST00000417137 FDPSP14324 419 aaKnown RBP26.4■■□□□ 1.82
SMARCB1-205ENST00000417137 MRPS9P82933 396 aaKnown RBP26.4■■□□□ 1.82
SMARCB1-205ENST00000417137 UBE2Q1Q7Z7E8 422 aa26.4■■□□□ 1.82
SMARCB1-205ENST00000417137 PCSK9Q8NBP7 692 aaKnown RBP26.4■■□□□ 1.82
SMARCB1-205ENST00000417137 C11orf49Q9H6J7 331 aa26.4■■□□□ 1.82
SMARCB1-205ENST00000417137 TMEM260Q9NX78 707 aa26.4■■□□□ 1.82
SMARCB1-205ENST00000417137 ZEB2O60315 1214 aa26.39■■□□□ 1.82
SMARCB1-205ENST00000417137 CST5P28325 142 aaPredicted RBP26.39■■□□□ 1.82
SMARCB1-205ENST00000417137 MNX1P50219 401 aaPredicted RBP26.39■■□□□ 1.82
SMARCB1-205ENST00000417137 NKX3-2P78367 333 aa26.39■■□□□ 1.82
SMARCB1-205ENST00000417137 HMGN5P82970 282 aaKnown RBP26.39■■□□□ 1.82
SMARCB1-205ENST00000417137 ST3GAL1Q11201 340 aa26.39■■□□□ 1.82
SMARCB1-205ENST00000417137 BRDTQ58F21 947 aaPredicted RBP26.39■■□□□ 1.82
SMARCB1-205ENST00000417137 GNASQ5JWF2 1037 aa26.39■■□□□ 1.82
SMARCB1-205ENST00000417137 CCDC62Q6P9F0 684 aa26.39■■□□□ 1.82
SMARCB1-205ENST00000417137 KLHDC9Q8NEP7 349 aa26.39■■□□□ 1.82
SMARCB1-205ENST00000417137 INPP4AQ96PE3 977 aaPredicted RBP26.39■■□□□ 1.82
SMARCB1-205ENST00000417137 RTEL1Q9NZ71 1219 aa26.39■■□□□ 1.82
SMARCB1-205ENST00000417137 JAK2O60674 1132 aa26.38■■□□□ 1.81
SMARCB1-205ENST00000417137 RGS20O76081 388 aa26.38■■□□□ 1.81
SMARCB1-205ENST00000417137 TRIM29Q14134 588 aa26.38■■□□□ 1.81
SMARCB1-205ENST00000417137 BLIDQ8IZY5 108 aa26.38■■□□□ 1.81
SMARCB1-205ENST00000417137 DAGLBQ8NCG7 672 aa26.38■■□□□ 1.81
SMARCB1-205ENST00000417137 OR6J1Q8NGC5 347 aa26.38■■□□□ 1.81
SMARCB1-205ENST00000417137 DIS3LQ8TF46 1054 aaKnown RBP26.38■■□□□ 1.81
SMARCB1-205ENST00000417137 TMX3Q96JJ7 454 aa26.38■■□□□ 1.81
SMARCB1-205ENST00000417137 CDHR1Q96JP9 859 aa26.38■■□□□ 1.81
SMARCB1-205ENST00000417137 HTATIP2Q9BUP3 242 aa26.38■■□□□ 1.81
SMARCB1-205ENST00000417137 DDX41Q9UJV9 622 aaKnown RBP26.38■■□□□ 1.81
SMARCB1-205ENST00000417137 MOXD2PA6NHM9 499 aa26.37■■□□□ 1.81
SMARCB1-205ENST00000417137 GH1P01241 217 aa26.37■■□□□ 1.81
SMARCB1-205ENST00000417137 ICAM3P32942 547 aa26.37■■□□□ 1.81
SMARCB1-205ENST00000417137 SREBF1P36956 1147 aa26.37■■□□□ 1.81
SMARCB1-205ENST00000417137 LY6KQ17RY6 165 aa26.37■■□□□ 1.81
SMARCB1-205ENST00000417137 ZFP91Q96JP5 570 aaPredicted RBP26.37■■□□□ 1.81
SMARCB1-205ENST00000417137 PGBD1Q96JS3 809 aa26.37■■□□□ 1.81
SMARCB1-205ENST00000417137 PHF20Q9BVI0 1012 aa26.37■■□□□ 1.81
SMARCB1-205ENST00000417137 MAFGO15525 162 aa26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 FIBPO43427 364 aa26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 DTNBO60941 627 aa26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 ARIH2O95376 493 aa26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 CD2BP2O95400 341 aaKnown RBP26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 COL6A1P12109 1028 aa26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 KCNA10Q16322 511 aa26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 FSCN1Q16658 493 aaKnown RBP26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 TMEM63BQ5T3F8 832 aa26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 FAM184AQ8NB25 1140 aa26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 GPRASP2Q96D09 838 aa26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 SENP6Q9GZR1 1112 aaPredicted RBP26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 BRMS1Q9HCU9 246 aa26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 KCNJ14Q9UNX9 436 aa26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 PHF24Q9UPV7 400 aa26.36■■□□□ 1.81
SMARCB1-205ENST00000417137 SPATA31C2B4DYI2 1134 aa26.35■■□□□ 1.81
SMARCB1-205ENST00000417137 ZNF76P36508 570 aa26.35■■□□□ 1.81
SMARCB1-205ENST00000417137 CPT1AP50416 773 aa26.35■■□□□ 1.81
SMARCB1-205ENST00000417137 ARHGAP4P98171 946 aa26.35■■□□□ 1.81
SMARCB1-205ENST00000417137 DHX37Q8IY37 1157 aaKnown RBP26.35■■□□□ 1.81
SMARCB1-205ENST00000417137 UBIAD1Q9Y5Z9 338 aa26.35■■□□□ 1.81
SMARCB1-205ENST00000417137 LAMC2Q13753 1193 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms