RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 DGKDQ16760 1214 aa16.78■□□□□ 0.28
PAF1-202ENST00000416728 TMEM67Q5HYA8 995 aa16.78■□□□□ 0.28
PAF1-202ENST00000416728 TTC22Q5TAA0 569 aa16.78■□□□□ 0.28
PAF1-202ENST00000416728 CYB5R4Q7L1T6 521 aa16.78■□□□□ 0.28
PAF1-202ENST00000416728 SESTD1Q86VW0 696 aa16.78■□□□□ 0.28
PAF1-202ENST00000416728 CAGE1Q8TC20 777 aa16.78■□□□□ 0.28
PAF1-202ENST00000416728 RUFY2Q8WXA3 655 aa16.78■□□□□ 0.28
PAF1-202ENST00000416728 SLC9A7Q96T83 725 aa16.78■□□□□ 0.28
PAF1-202ENST00000416728 THEGQ9P2T0 379 aa16.78■□□□□ 0.28
PAF1-202ENST00000416728 DDX41Q9UJV9 622 aaKnown RBP16.78■□□□□ 0.28
PAF1-202ENST00000416728 PDE4AP27815 886 aa16.77■□□□□ 0.28
PAF1-202ENST00000416728 GHRHRQ02643 423 aa16.77■□□□□ 0.28
PAF1-202ENST00000416728 GDF6Q6KF10 455 aaPredicted RBP16.77■□□□□ 0.28
PAF1-202ENST00000416728 PHOSPHO2Q8TCD6 241 aa16.77■□□□□ 0.28
PAF1-202ENST00000416728 AFAP1L1Q8TED9 768 aa16.77■□□□□ 0.28
PAF1-202ENST00000416728 ATXN2LQ8WWM7 1075 aaKnown RBP16.77■□□□□ 0.28
PAF1-202ENST00000416728 KAT2BQ92831 832 aa16.77■□□□□ 0.28
PAF1-202ENST00000416728 EMID1Q96A84 441 aaPredicted RBP16.77■□□□□ 0.28
PAF1-202ENST00000416728 MTMR8Q96EF0 704 aa16.77■□□□□ 0.28
PAF1-202ENST00000416728 KATNAL1Q9BW62 490 aa16.77■□□□□ 0.28
PAF1-202ENST00000416728 MAP3K20Q9NYL2 800 aaKnown RBP16.77■□□□□ 0.28
PAF1-202ENST00000416728 MAD2L2Q9UI95 211 aa16.77■□□□□ 0.28
PAF1-202ENST00000416728 PCDHA1Q9Y5I3 950 aa16.77■□□□□ 0.28
PAF1-202ENST00000416728 U3KPZ7 1027 aaPredicted RBP16.77■□□□□ 0.28
PAF1-202ENST00000416728 ERICH2A1L162 156 aa16.77■□□□□ 0.27
PAF1-202ENST00000416728 PALM3A6NDB9 673 aaPredicted RBP16.77■□□□□ 0.27
PAF1-202ENST00000416728 PPP1R11O60927 126 aaPredicted RBP16.77■□□□□ 0.27
PAF1-202ENST00000416728 CA3P07451 260 aa16.77■□□□□ 0.27
PAF1-202ENST00000416728 MYCLP12524 364 aaPredicted RBP16.77■□□□□ 0.27
PAF1-202ENST00000416728 TRAF1Q13077 416 aa16.77■□□□□ 0.27
PAF1-202ENST00000416728 LAMC2Q13753 1193 aa16.77■□□□□ 0.27
PAF1-202ENST00000416728 HOMER1Q86YM7 354 aa16.77■□□□□ 0.27
PAF1-202ENST00000416728 DHX37Q8IY37 1157 aaKnown RBP16.77■□□□□ 0.27
PAF1-202ENST00000416728 C7orf31Q8N865 590 aa16.77■□□□□ 0.27
PAF1-202ENST00000416728 PPTC7Q8NI37 304 aa16.77■□□□□ 0.27
PAF1-202ENST00000416728 CTAGE1Q96RT6 745 aa16.77■□□□□ 0.27
PAF1-202ENST00000416728 PDCD2LQ9BRP1 358 aa16.77■□□□□ 0.27
PAF1-202ENST00000416728 IFIT3O14879 490 aaKnown RBP16.76■□□□□ 0.27
PAF1-202ENST00000416728 BAIAP3O94812 1187 aa16.76■□□□□ 0.27
PAF1-202ENST00000416728 CYP21A2P08686 494 aa16.76■□□□□ 0.27
PAF1-202ENST00000416728 STOX1Q6ZVD7 989 aa16.76■□□□□ 0.27
PAF1-202ENST00000416728 RALYLQ86SE5 291 aaKnown RBP16.76■□□□□ 0.27
PAF1-202ENST00000416728 SAMD3Q8N6K7 520 aa16.76■□□□□ 0.27
PAF1-202ENST00000416728 ALG1Q9BT22 464 aa16.76■□□□□ 0.27
PAF1-202ENST00000416728 GTF2IRD1Q9UHL9 959 aa16.76■□□□□ 0.27
PAF1-202ENST00000416728 KIF28PB7ZC32 967 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 F2P00734 622 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 ZNF286BP0CG31 522 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 SELPP16109 830 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 CHMLP26374 656 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 HOXA13P31271 388 aaPredicted RBP16.75■□□□□ 0.27
PAF1-202ENST00000416728 PSEN2P49810 448 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 PTH1RQ03431 593 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 MFSD10Q14728 455 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 GRM4Q14833 912 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 SART3Q15020 963 aaKnown RBP16.75■□□□□ 0.27
PAF1-202ENST00000416728 KCNV1Q6PIU1 500 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 LRRC8DQ7L1W4 858 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 HERC6Q8IVU3 1022 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 MICALL1Q8N3F8 863 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 ASB2Q96Q27 587 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 HDAC6Q9UBN7 1215 aa16.75■□□□□ 0.27
PAF1-202ENST00000416728 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
PAF1-202ENST00000416728 GCOM1H8Y6P7 765 aaPredicted RBP16.74■□□□□ 0.27
PAF1-202ENST00000416728 RGS20O76081 388 aa16.74■□□□□ 0.27
PAF1-202ENST00000416728 PARNO95453 639 aaKnown RBP16.74■□□□□ 0.27
PAF1-202ENST00000416728 POLR2MP0CAP2 368 aa16.74■□□□□ 0.27
PAF1-202ENST00000416728 KCNJ6P48051 423 aa16.74■□□□□ 0.27
PAF1-202ENST00000416728 MRPS5P82675 430 aaKnown RBP16.74■□□□□ 0.27
PAF1-202ENST00000416728 RBL2Q08999 1139 aa16.74■□□□□ 0.27
PAF1-202ENST00000416728 WTAPQ15007 396 aa16.74■□□□□ 0.27
PAF1-202ENST00000416728 PGM5Q15124 567 aa16.74■□□□□ 0.27
PAF1-202ENST00000416728 KIAA0753Q2KHM9 967 aa16.74■□□□□ 0.27
PAF1-202ENST00000416728 VSIG10LQ86VR7 867 aa16.74■□□□□ 0.27
PAF1-202ENST00000416728 NCOA7Q8NI08 942 aa16.74■□□□□ 0.27
PAF1-202ENST00000416728 DHX38Q92620 1227 aaKnown RBP16.74■□□□□ 0.27
PAF1-202ENST00000416728 PIGSQ96S52 555 aa16.74■□□□□ 0.27
PAF1-202ENST00000416728 TSPYL2Q9H2G4 693 aaPredicted RBP16.74■□□□□ 0.27
PAF1-202ENST00000416728 RIOX1Q9H6W3 641 aa16.74■□□□□ 0.27
PAF1-202ENST00000416728 HAS3O00219 553 aa16.73■□□□□ 0.27
PAF1-202ENST00000416728 GTPBP6O43824 516 aaPredicted RBP16.73■□□□□ 0.27
PAF1-202ENST00000416728 PPFIA4O75335 1185 aa16.73■□□□□ 0.27
PAF1-202ENST00000416728 CKBP12277 381 aa16.73■□□□□ 0.27
PAF1-202ENST00000416728 CCND2P30279 289 aa16.73■□□□□ 0.27
PAF1-202ENST00000416728 SLC35G1Q2M3R5 365 aa16.73■□□□□ 0.27
PAF1-202ENST00000416728 CELF3Q5SZQ8 465 aaKnown RBP16.73■□□□□ 0.27
PAF1-202ENST00000416728 MYSM1Q5VVJ2 828 aa16.73■□□□□ 0.27
PAF1-202ENST00000416728 FCHSD1Q86WN1 690 aa16.73■□□□□ 0.27
PAF1-202ENST00000416728 IL27Q8NEV9 243 aa16.73■□□□□ 0.27
PAF1-202ENST00000416728 IL31RAQ8NI17 732 aa16.73■□□□□ 0.27
PAF1-202ENST00000416728 SPATA33Q96N06 139 aa16.73■□□□□ 0.27
PAF1-202ENST00000416728 CERS4Q9HA82 394 aa16.73■□□□□ 0.27
PAF1-202ENST00000416728 SENP2Q9HC62 589 aa16.73■□□□□ 0.27
PAF1-202ENST00000416728 TTC28Q96AY4 2481 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 MYO9BQ13459 2157 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 PNMA6FA0A0J9YX94 578 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 E7EWF7 191 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 TNFRSF10AO00220 468 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 TLL1O43897 1013 aa16.72■□□□□ 0.27
PAF1-202ENST00000416728 SORBS3O60504 671 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms