RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 CDCA5Q96FF9 252 aa4.24□□□□□ -1.73
APP-207ENST00000415997 PPP1R16BQ96T49 567 aa4.24□□□□□ -1.73
APP-207ENST00000415997 FAM129BQ96TA1 746 aa4.24□□□□□ -1.73
APP-207ENST00000415997 CDX2Q99626 313 aaPredicted RBP4.24□□□□□ -1.73
APP-207ENST00000415997 C1QTNF1Q9BXJ1 281 aa4.24□□□□□ -1.73
APP-207ENST00000415997 BCO2Q9BYV7 579 aa4.24□□□□□ -1.73
APP-207ENST00000415997 VPS33BQ9H267 617 aa4.24□□□□□ -1.73
APP-207ENST00000415997 CNOT7Q9UIV1 285 aaKnown RBP4.24□□□□□ -1.73
APP-207ENST00000415997 ZNRF3Q9ULT6 936 aa4.24□□□□□ -1.73
APP-207ENST00000415997 PTCH2Q9Y6C5 1203 aa4.24□□□□□ -1.73
APP-207ENST00000415997 RAB3GAP2Q9H2M9 1393 aa4.24□□□□□ -1.73
APP-207ENST00000415997 DCHS1Q96JQ0 3298 aa4.23□□□□□ -1.73
APP-207ENST00000415997 LOC105371045A0A1W2PR82 267 aa4.23□□□□□ -1.73
APP-207ENST00000415997 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
APP-207ENST00000415997 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.23□□□□□ -1.73
APP-207ENST00000415997 NFIBO00712 420 aa4.23□□□□□ -1.73
APP-207ENST00000415997 NME2P22392 152 aa4.23□□□□□ -1.73
APP-207ENST00000415997 MRE11P49959 708 aa4.23□□□□□ -1.73
APP-207ENST00000415997 ST5P78524 1137 aa4.23□□□□□ -1.73
APP-207ENST00000415997 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
APP-207ENST00000415997 MOB2Q70IA6 237 aa4.23□□□□□ -1.73
APP-207ENST00000415997 FAM214BQ7L5A3 538 aa4.23□□□□□ -1.73
APP-207ENST00000415997 NIM1KQ8IY84 436 aa4.23□□□□□ -1.73
APP-207ENST00000415997 BHLHE22Q8NFJ8 381 aaPredicted RBP4.23□□□□□ -1.73
APP-207ENST00000415997 CCER1Q8TC90 406 aaPredicted RBP4.23□□□□□ -1.73
APP-207ENST00000415997 GRIN3AQ8TCU5 1115 aa4.23□□□□□ -1.73
APP-207ENST00000415997 DPF2Q92785 391 aa4.23□□□□□ -1.73
APP-207ENST00000415997 COG3Q96JB2 828 aa4.23□□□□□ -1.73
APP-207ENST00000415997 HSPA12BQ96MM6 686 aa4.23□□□□□ -1.73
APP-207ENST00000415997 LRFN3Q9BTN0 628 aa4.23□□□□□ -1.73
APP-207ENST00000415997 EMILIN2Q9BXX0 1053 aa4.23□□□□□ -1.73
APP-207ENST00000415997 RTFDC1Q9BY42 306 aaPredicted RBP4.23□□□□□ -1.73
APP-207ENST00000415997 SLC12A5Q9H2X9 1139 aa4.23□□□□□ -1.73
APP-207ENST00000415997 NSUN3Q9H649 340 aaKnown RBP4.23□□□□□ -1.73
APP-207ENST00000415997 ATP13A1Q9HD20 1204 aa4.23□□□□□ -1.73
APP-207ENST00000415997 PRDM5Q9NQX1 630 aaPredicted RBP4.23□□□□□ -1.73
APP-207ENST00000415997 TPX2Q9ULW0 747 aaKnown RBP4.23□□□□□ -1.73
APP-207ENST00000415997 IRS2Q9Y4H2 1338 aa4.22□□□□□ -1.73
APP-207ENST00000415997 RIC1Q4ADV7 1423 aa4.22□□□□□ -1.73
APP-207ENST00000415997 NPIPB6E9PJ23 425 aa4.22□□□□□ -1.73
APP-207ENST00000415997 IGF2BP3O00425 579 aaKnown RBP eCLIP4.22□□□□□ -1.73
APP-207ENST00000415997 CAMTA2O94983 1202 aa4.22□□□□□ -1.73
APP-207ENST00000415997 TSPAN15O95858 294 aa4.22□□□□□ -1.73
APP-207ENST00000415997 GJB1P08034 283 aa4.22□□□□□ -1.73
APP-207ENST00000415997 TMEM253P0C7T8 217 aa4.22□□□□□ -1.73
APP-207ENST00000415997 ALDH1B1P30837 517 aa4.22□□□□□ -1.73
APP-207ENST00000415997 B4GALNT3Q6L9W6 998 aa4.22□□□□□ -1.73
APP-207ENST00000415997 NXPE4Q6UWF7 544 aa4.22□□□□□ -1.73
APP-207ENST00000415997 TPTE2Q6XPS3 522 aa4.22□□□□□ -1.73
APP-207ENST00000415997 HDGFL2Q7Z4V5 671 aaPredicted RBP4.22□□□□□ -1.73
APP-207ENST00000415997 SH3TC2Q8TF17 1288 aa4.22□□□□□ -1.73
APP-207ENST00000415997 CITED4Q96RK1 184 aa4.22□□□□□ -1.73
APP-207ENST00000415997 SETDB2Q96T68 719 aa4.22□□□□□ -1.73
APP-207ENST00000415997 FOXQ1Q9C009 403 aa4.22□□□□□ -1.73
APP-207ENST00000415997 LMCD1Q9NZU5 365 aa4.22□□□□□ -1.73
APP-207ENST00000415997 PCDHA4Q9UN74 947 aa4.22□□□□□ -1.73
APP-207ENST00000415997 TRANK1O15050 2925 aa4.22□□□□□ -1.73
APP-207ENST00000415997 ALPK3Q96L96 1907 aa4.22□□□□□ -1.73
APP-207ENST00000415997 POLR2AP24928 1970 aaKnown RBP4.22□□□□□ -1.73
APP-207ENST00000415997 ASTN2O75129 1339 aaPredicted RBP4.21□□□□□ -1.73
APP-207ENST00000415997 KIF7Q2M1P5 1343 aa4.21□□□□□ -1.73
APP-207ENST00000415997 CFAP47Q6ZTR5 3102 aa4.21□□□□□ -1.73
APP-207ENST00000415997 A0A087WZG4 1122 aa4.21□□□□□ -1.74
APP-207ENST00000415997 YDJCA8MPS7 323 aa4.21□□□□□ -1.74
APP-207ENST00000415997 PRR33A8MZF0 331 aa4.21□□□□□ -1.74
APP-207ENST00000415997 B8ZZF3 427 aa4.21□□□□□ -1.74
APP-207ENST00000415997 UBE2Q2LH0YL09 131 aa4.21□□□□□ -1.74
APP-207ENST00000415997 H3BS24 57 aa4.21□□□□□ -1.74
APP-207ENST00000415997 H7C1D1 291 aa4.21□□□□□ -1.74
APP-207ENST00000415997 RBAK-RBAKDNI3L0D1 243 aa4.21□□□□□ -1.74
APP-207ENST00000415997 PPIP5K2O43314 1243 aa4.21□□□□□ -1.74
APP-207ENST00000415997 FBXO24O75426 580 aa4.21□□□□□ -1.74
APP-207ENST00000415997 CBX7O95931 251 aa4.21□□□□□ -1.74
APP-207ENST00000415997 EOMESO95936 686 aa4.21□□□□□ -1.74
APP-207ENST00000415997 HSP90AB1P08238 724 aaKnown RBP4.21□□□□□ -1.74
APP-207ENST00000415997 XRCC5P13010 732 aaKnown RBP4.21□□□□□ -1.74
APP-207ENST00000415997 INHBEP58166 350 aa4.21□□□□□ -1.74
APP-207ENST00000415997 FGD1P98174 961 aa4.21□□□□□ -1.74
APP-207ENST00000415997 SP3Q02447 781 aa4.21□□□□□ -1.74
APP-207ENST00000415997 CRHR2Q13324 411 aa4.21□□□□□ -1.74
APP-207ENST00000415997 TNIP1Q15025 636 aa4.21□□□□□ -1.74
APP-207ENST00000415997 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.21□□□□□ -1.74
APP-207ENST00000415997 ARMCX6Q7L4S7 300 aa4.21□□□□□ -1.74
APP-207ENST00000415997 C1QL4Q86Z23 238 aa4.21□□□□□ -1.74
APP-207ENST00000415997 CILP2Q8IUL8 1156 aa4.21□□□□□ -1.74
APP-207ENST00000415997 USP38Q8NB14 1042 aa4.21□□□□□ -1.74
APP-207ENST00000415997 ELMO3Q96BJ8 720 aa4.21□□□□□ -1.74
APP-207ENST00000415997 DCPSQ96C86 337 aaKnown RBP4.21□□□□□ -1.74
APP-207ENST00000415997 MAST4O15021 2626 aa4.21□□□□□ -1.74
APP-207ENST00000415997 CHD9Q3L8U1 2897 aa4.2□□□□□ -1.74
APP-207ENST00000415997 PRAMEF22A3QJZ6 481 aa4.2□□□□□ -1.74
APP-207ENST00000415997 PRAMEF27A3QJZ7 478 aa4.2□□□□□ -1.74
APP-207ENST00000415997 MAGEA10P43363 369 aaPredicted RBP4.2□□□□□ -1.74
APP-207ENST00000415997 CLCN7P51798 805 aa4.2□□□□□ -1.74
APP-207ENST00000415997 KIAA2012Q0VF49 1180 aa4.2□□□□□ -1.74
APP-207ENST00000415997 TBC1D10BQ4KMP7 808 aaPredicted RBP4.2□□□□□ -1.74
APP-207ENST00000415997 LDLRAD1Q5T700 205 aa4.2□□□□□ -1.74
APP-207ENST00000415997 FBXO15Q8NCQ5 510 aaPredicted RBP4.2□□□□□ -1.74
APP-207ENST00000415997 FAM161BQ96MY7 647 aa4.2□□□□□ -1.74
APP-207ENST00000415997 BCL2L13Q9BXK5 485 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms