RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 ERBB3P21860 1342 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 SALL3Q9BXA9 1300 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 TULP4Q9NRJ4 1543 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 ADCY8P40145 1251 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 ANTXR2P58335 489 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 GFPT1Q06210 699 aaPredicted RBP14.09□□□□□ -0.15
SCN1B-202ENST00000415950 ATG9AQ7Z3C6 839 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 NYXQ9GZU5 481 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 OTUD6AQ7L8S5 288 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 PHLDB2Q86SQ0 1253 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 GSDMBQ8TAX9 411 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 BPIFA3Q9BQP9 254 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 EHD2Q9NZN4 543 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 TBK1Q9UHD2 729 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 I3L4J1 428 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 GMNNO75496 209 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 CIAO1O76071 339 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 BCRP11274 1271 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 SLC16A2P36021 539 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 NLRP10Q86W26 655 aa14.09□□□□□ -0.15
SCN1B-202ENST00000415950 TPX2Q9ULW0 747 aaKnown RBP14.09□□□□□ -0.15
SCN1B-202ENST00000415950 DAPK3O43293 454 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 KRT14P02533 472 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 H2AFXP16104 143 aaPredicted RBP14.08□□□□□ -0.16
SCN1B-202ENST00000415950 SNX16P57768 344 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 TBC1D1Q86TI0 1168 aaPredicted RBP14.08□□□□□ -0.16
SCN1B-202ENST00000415950 MS4A14Q96JA4 679 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 L2HGDHQ9H9P8 463 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 TACC3Q9Y6A5 838 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 H3BQF6 201 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 KRT19P08727 400 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 USPL1Q5W0Q7 1092 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 CCDC127Q96BQ5 260 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 FUT8Q9BYC5 575 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 ARPP21Q9UBL0 812 aaPredicted RBP14.08□□□□□ -0.16
SCN1B-202ENST00000415950 KIF1BO60333 1816 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 ARHGEF40Q8TER5 1519 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 NBPF26B4DH59 902 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 TNNI1P19237 187 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 NR2F2P24468 414 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 CCNE1P24864 410 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 MESDQ14696 234 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 NBPF10Q6P3W6 841 aaKnown RBP14.08□□□□□ -0.16
SCN1B-202ENST00000415950 MMS22LQ6ZRQ5 1243 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 NBPF15Q8N660 670 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 N4BP2L2Q92802 583 aaPredicted RBP14.08□□□□□ -0.16
SCN1B-202ENST00000415950 RNF34Q969K3 372 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 GBP5Q96PP8 586 aa14.08□□□□□ -0.16
SCN1B-202ENST00000415950 INTS9Q9NV88 658 aaKnown RBP14.08□□□□□ -0.16
SCN1B-202ENST00000415950 CASQ2O14958 399 aaPredicted RBP14.07□□□□□ -0.16
SCN1B-202ENST00000415950 MKRN4PQ13434 485 aaPredicted RBP14.07□□□□□ -0.16
SCN1B-202ENST00000415950 CROCCP2Q86T23 111 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 ARHGAP24Q8N264 748 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 CFAP61Q8NHU2 1237 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 COG1Q8WTW3 980 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 CRCPO75575 148 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 USP14P54578 494 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 CCDC13Q8IYE1 715 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 CEP120Q8N960 986 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 SLC44A5Q8NCS7 719 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 LARP4BQ92615 738 aaKnown RBP14.07□□□□□ -0.16
SCN1B-202ENST00000415950 C8orf37Q96NL8 207 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 MPHOSPH6Q99547 160 aaKnown RBP14.07□□□□□ -0.16
SCN1B-202ENST00000415950 TRIM6Q9C030 488 aaPredicted RBP14.07□□□□□ -0.16
SCN1B-202ENST00000415950 EFCC1Q9HA90 598 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 SLC24A3Q9HC58 644 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 ZNF446Q9NWS9 450 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 IQGAP3Q86VI3 1631 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 ATF7P17544 494 aaPredicted RBP14.07□□□□□ -0.16
SCN1B-202ENST00000415950 PPP2R5AQ15172 486 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 CCDC89Q8N998 374 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 MAGOHBQ96A72 148 aaKnown RBP14.07□□□□□ -0.16
SCN1B-202ENST00000415950 GGT7Q9UJ14 662 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 DUSP10Q9Y6W6 482 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 MAP3K15Q6ZN16 1313 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 DCAF8L1A6NGE4 600 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 PALMO75781 387 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 FCER1AP12319 257 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 SNX1Q13596 522 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 SNCBQ16143 134 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 RASIP1Q5U651 963 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 LBHD1Q9BQE6 289 aaPredicted RBP14.07□□□□□ -0.16
SCN1B-202ENST00000415950 PLCB1Q9NQ66 1216 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 DISC1Q9NRI5 854 aa14.07□□□□□ -0.16
SCN1B-202ENST00000415950 SASH3O75995 380 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 EXOC3L4Q17RC7 722 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 ENAHQ8N8S7 591 aaPredicted RBP14.06□□□□□ -0.16
SCN1B-202ENST00000415950 CCT6BQ92526 530 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 DDX47Q9H0S4 455 aaKnown RBP14.06□□□□□ -0.16
SCN1B-202ENST00000415950 FBXO2Q9UK22 296 aaPredicted RBP14.06□□□□□ -0.16
SCN1B-202ENST00000415950 PLAAQ9Y263 795 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 SH3BP5O60239 455 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 OPHN1O60890 802 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 SEC24CP53992 1094 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 UBXN2AP68543 259 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 RPAINQ86UA6 219 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 PIGSQ96S52 555 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 LRRC53A6NM62 1247 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 SFI1A8K8P3 1242 aa14.06□□□□□ -0.16
SCN1B-202ENST00000415950 THAP12O43422 761 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms