RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 NIPA1Q7RTP0 329 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 KRT25Q7Z3Z0 450 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 IL31RAQ8NI17 732 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 SCFD2Q8WU76 684 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 ABHD8Q96I13 439 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 C8orf76Q96K31 380 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 CRISPLD2Q9H0B8 497 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 DDX20Q9UHI6 824 aaKnown RBP13.62□□□□□ -0.23
ATG4B-207ENST00000415107 KCNJ14Q9UNX9 436 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 BRCA2P51587 3418 aa13.62□□□□□ -0.23
ATG4B-207ENST00000415107 DUSP11O75319 330 aaKnown RBP13.61□□□□□ -0.23
ATG4B-207ENST00000415107 RGS20O76081 388 aa13.61□□□□□ -0.23
ATG4B-207ENST00000415107 PDCP20941 246 aa13.61□□□□□ -0.23
ATG4B-207ENST00000415107 CCND3P30281 292 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-207ENST00000415107 ARHGAP4P98171 946 aa13.61□□□□□ -0.23
ATG4B-207ENST00000415107 DUSP28Q4G0W2 176 aa13.61□□□□□ -0.23
ATG4B-207ENST00000415107 LHX8Q68G74 356 aa13.61□□□□□ -0.23
ATG4B-207ENST00000415107 CCDC62Q6P9F0 684 aa13.61□□□□□ -0.23
ATG4B-207ENST00000415107 FBXO16Q8IX29 292 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-207ENST00000415107 TNS4Q8IZW8 715 aa13.61□□□□□ -0.23
ATG4B-207ENST00000415107 GPRASP2Q96D09 838 aa13.61□□□□□ -0.23
ATG4B-207ENST00000415107 CDHR1Q96JP9 859 aa13.61□□□□□ -0.23
ATG4B-207ENST00000415107 UNC93B1Q9H1C4 597 aa13.61□□□□□ -0.23
ATG4B-207ENST00000415107 FOXP1Q9H334 677 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-207ENST00000415107 BIN2Q9UBW5 565 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-207ENST00000415107 FAM184BQ9ULE4 1060 aa13.61□□□□□ -0.23
ATG4B-207ENST00000415107 GNEQ9Y223 722 aaKnown RBP13.61□□□□□ -0.23
ATG4B-207ENST00000415107 UBIAD1Q9Y5Z9 338 aa13.61□□□□□ -0.23
ATG4B-207ENST00000415107 MYH7BA7E2Y1 1941 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 ADAMTS3O15072 1205 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 U2AF2P26368 475 aaKnown RBP eCLIP13.6□□□□□ -0.233e-9■■□□□ 14.1
ATG4B-207ENST00000415107 GJA8P48165 433 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 TTLL4Q14679 1199 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 SAFBQ15424 915 aaKnown RBP eCLIP13.6□□□□□ -0.23
ATG4B-207ENST00000415107 CCDC144BQ3MJ40 725 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 CEP55Q53EZ4 464 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 JAKMIP3Q5VZ66 844 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 DIS3L2Q8IYB7 885 aaKnown RBP13.6□□□□□ -0.23
ATG4B-207ENST00000415107 ANKLE1Q8NAG6 615 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 EMID1Q96A84 441 aaPredicted RBP13.6□□□□□ -0.23
ATG4B-207ENST00000415107 MBOAT7Q96N66 472 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 SENP7Q9BQF6 1050 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 RNF208Q9H0X6 261 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 UPF3AQ9H1J1 476 aaKnown RBP13.6□□□□□ -0.23
ATG4B-207ENST00000415107 GJB4Q9NTQ9 266 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 TMEM260Q9NX78 707 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 ZHX1Q9UKY1 873 aaPredicted RBP13.6□□□□□ -0.23
ATG4B-207ENST00000415107 OGDHLQ9ULD0 1010 aa13.6□□□□□ -0.23
ATG4B-207ENST00000415107 CYP3A7-CYP3A51PA0A087WV96 503 aa13.59□□□□□ -0.23
ATG4B-207ENST00000415107 FIBPO43427 364 aa13.59□□□□□ -0.23
ATG4B-207ENST00000415107 SGPL1O95470 568 aa13.59□□□□□ -0.23
ATG4B-207ENST00000415107 CYP3A7P24462 503 aa13.59□□□□□ -0.23
ATG4B-207ENST00000415107 CST5P28325 142 aaPredicted RBP13.59□□□□□ -0.23
ATG4B-207ENST00000415107 SETQ01105 290 aaPredicted RBP13.59□□□□□ -0.23
ATG4B-207ENST00000415107 NONOQ15233 471 aaKnown RBP eCLIP13.59□□□□□ -0.23
ATG4B-207ENST00000415107 PRAMEF19Q5SWL8 479 aa13.59□□□□□ -0.23
ATG4B-207ENST00000415107 NLRX1Q86UT6 975 aa13.59□□□□□ -0.23
ATG4B-207ENST00000415107 RASGRP4Q8TDF6 673 aa13.59□□□□□ -0.23
ATG4B-207ENST00000415107 NAP1L4Q99733 375 aaKnown RBP13.59□□□□□ -0.23
ATG4B-207ENST00000415107 MXRA8Q9BRK3 442 aa13.59□□□□□ -0.23
ATG4B-207ENST00000415107 JADE2Q9NQC1 790 aa13.59□□□□□ -0.23
ATG4B-207ENST00000415107 IGLV3-22A0A075B6J6 115 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 CCDC194A0A1B0GVG4 234 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 BTBD18B2RXH4 712 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 SPATA31C2B4DYI2 1134 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 MEIS1O00470 390 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 ADCY6O43306 1168 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 EDIL3O43854 480 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 ADAMTS4O75173 837 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 RARBP10826 455 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 GCFC2P16383 781 aaKnown RBP13.58□□□□□ -0.24
ATG4B-207ENST00000415107 ITGB5P18084 799 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 ADCYAP1R1P41586 468 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 TRAPPC10P48553 1259 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 GJA9P57773 515 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 TNFAIP2Q03169 654 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 ORC2Q13416 577 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-207ENST00000415107 BECN1Q14457 450 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 PPP4R3AQ6IN85 833 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 OXER1Q8TDS5 423 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 TBCKQ8TEA7 893 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 U2AF1L4Q8WU68 220 aaKnown RBP13.58□□□□□ -0.24
ATG4B-207ENST00000415107 TMEM106CQ9BVX2 250 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 WDR11Q9BZH6 1224 aa13.58□□□□□ -0.24
ATG4B-207ENST00000415107 DDX41Q9UJV9 622 aaKnown RBP13.58□□□□□ -0.24
ATG4B-207ENST00000415107 DDX49Q9Y6V7 483 aaKnown RBP13.58□□□□□ -0.24
ATG4B-207ENST00000415107 DTNBO60941 627 aa13.57□□□□□ -0.24
ATG4B-207ENST00000415107 MYCLP12524 364 aaPredicted RBP13.57□□□□□ -0.24
ATG4B-207ENST00000415107 SMPD1P17405 629 aa13.57□□□□□ -0.24
ATG4B-207ENST00000415107 SEMA3FQ13275 785 aa13.57□□□□□ -0.24
ATG4B-207ENST00000415107 NR5A1Q13285 461 aa13.57□□□□□ -0.24
ATG4B-207ENST00000415107 Q4G0T1 1027 aa13.57□□□□□ -0.24
ATG4B-207ENST00000415107 NEK8Q86SG6 692 aa13.57□□□□□ -0.24
ATG4B-207ENST00000415107 GIMAP8Q8ND71 665 aaPredicted RBP13.57□□□□□ -0.24
ATG4B-207ENST00000415107 KLHDC9Q8NEP7 349 aa13.57□□□□□ -0.24
ATG4B-207ENST00000415107 LENG9Q96B70 501 aa13.57□□□□□ -0.24
ATG4B-207ENST00000415107 PGBD1Q96JS3 809 aa13.57□□□□□ -0.24
ATG4B-207ENST00000415107 PDGFCQ9NRA1 345 aa13.57□□□□□ -0.24
ATG4B-207ENST00000415107 MRVI1Q9Y6F6 885 aa13.57□□□□□ -0.24
ATG4B-207ENST00000415107 KIAA0100Q14667 2235 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms