RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 MROH8Q9H579 483 aa10.98□□□□□ -0.65
RIF1-202ENST00000414861 TLR2O60603 784 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 CUTAO60888 179 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 ECM2O94769 699 aaPredicted RBP10.97□□□□□ -0.65
RIF1-202ENST00000414861 CCNA1P78396 465 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 KLHL40Q2TBA0 621 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 ARHGEF16Q5VV41 709 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 PCNX4Q63HM2 1172 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 ARL6IP4Q66PJ3 421 aaKnown RBP10.97□□□□□ -0.65
RIF1-202ENST00000414861 CCAR1Q8IX12 1150 aaKnown RBP10.97□□□□□ -0.65
RIF1-202ENST00000414861 FAM133AQ8N9E0 248 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 FSIP1Q8NA03 581 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 MMP19Q99542 508 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 KCNMB3Q9NPA1 279 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 MGAMO43451 1857 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 THSD7BQ9C0I4 1608 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 DOCK5Q9H7D0 1870 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 DNAJC25-GNG10A0A024R161 153 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 A0A1B0GVL5 298 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 A0A1W2PQ27 194 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 A0A1W2PQ64 194 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 A0A1W2PQD8 194 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 SOWAHBA6NEL2 793 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 ITGB5P18084 799 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 PTMSP20962 102 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 ZNF76P36508 570 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 Q4G0T1 1027 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 CEP55Q53EZ4 464 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 C17orf99Q6UX52 265 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 ETNPPLQ8TBG4 499 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 FERMT2Q96AC1 680 aa10.97□□□□□ -0.65
RIF1-202ENST00000414861 POTEB2H3BUK9 544 aa10.96□□□□□ -0.65
RIF1-202ENST00000414861 LAD1O00515 517 aa10.96□□□□□ -0.65
RIF1-202ENST00000414861 NR1I2O75469 434 aa10.96□□□□□ -0.65
RIF1-202ENST00000414861 MBD3O95983 291 aa10.96□□□□□ -0.65
RIF1-202ENST00000414861 FCER1AP12319 257 aa10.96□□□□□ -0.65
RIF1-202ENST00000414861 MYCLP12524 364 aaPredicted RBP10.96□□□□□ -0.65
RIF1-202ENST00000414861 PRPHP41219 470 aa10.96□□□□□ -0.65
RIF1-202ENST00000414861 VEGFBP49765 207 aa10.96□□□□□ -0.65
RIF1-202ENST00000414861 KCTD2Q14681 263 aa10.96□□□□□ -0.65
RIF1-202ENST00000414861 RESP18Q5W5W9 173 aa10.96□□□□□ -0.65
RIF1-202ENST00000414861 NSUN6Q8TEA1 469 aaKnown RBP10.96□□□□□ -0.65
RIF1-202ENST00000414861 MRPS27Q92552 414 aaKnown RBP10.96□□□□□ -0.65
RIF1-202ENST00000414861 NAP1L4Q99733 375 aaKnown RBP10.96□□□□□ -0.65
RIF1-202ENST00000414861 MAF1Q9H063 256 aa10.96□□□□□ -0.65
RIF1-202ENST00000414861 ZNF236Q9UL36 1845 aa10.96□□□□□ -0.65
RIF1-202ENST00000414861 CENPFP49454 3210 aa10.96□□□□□ -0.65
RIF1-202ENST00000414861 PP2D1A8MPX8 630 aa10.96□□□□□ -0.66
RIF1-202ENST00000414861 MSH4O15457 936 aa10.96□□□□□ -0.66
RIF1-202ENST00000414861 NR3C2P08235 984 aa10.96□□□□□ -0.66
RIF1-202ENST00000414861 PFKFB1P16118 471 aa10.96□□□□□ -0.66
RIF1-202ENST00000414861 CMA1P23946 247 aa10.96□□□□□ -0.66
RIF1-202ENST00000414861 CDC25AP30304 524 aa10.96□□□□□ -0.66
RIF1-202ENST00000414861 TXKP42681 527 aa10.96□□□□□ -0.66
RIF1-202ENST00000414861 ALDH5A1P51649 535 aaPredicted RBP10.96□□□□□ -0.66
RIF1-202ENST00000414861 NDUFA8P51970 172 aa10.96□□□□□ -0.66
RIF1-202ENST00000414861 GPR142Q7Z601 462 aa10.96□□□□□ -0.66
RIF1-202ENST00000414861 EPSTI1Q96J88 318 aa10.96□□□□□ -0.66
RIF1-202ENST00000414861 ZFYVE28Q9HCC9 887 aa10.96□□□□□ -0.66
RIF1-202ENST00000414861 POTEMA6NI47 508 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 MEIS1O00470 390 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 CA12O43570 354 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 ARP10275 920 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 ADORA2AP29274 412 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 SNW1Q13573 536 aaKnown RBP10.95□□□□□ -0.66
RIF1-202ENST00000414861 CAVIN1Q6NZI2 390 aaKnown RBP10.95□□□□□ -0.66
RIF1-202ENST00000414861 DTHD1Q6ZMT9 781 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 PLA2G4DQ86XP0 818 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 ZNF579Q8NAF0 562 aaKnown RBP10.95□□□□□ -0.66
RIF1-202ENST00000414861 SYMPKQ92797 1274 aaKnown RBP10.95□□□□□ -0.66
RIF1-202ENST00000414861 MXRA8Q9BRK3 442 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 WDR11Q9BZH6 1224 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 TMEM63CQ9P1W3 806 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 UBIAD1Q9Y5Z9 338 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 COBLO75128 1261 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 RGS20O76081 388 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 CCND2P30279 289 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 TECP42680 631 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 VSIG10LQ86VR7 867 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 ENGASEQ8NFI3 743 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 DNERQ8NFT8 737 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 TTC12Q9H892 705 aaPredicted RBP10.95□□□□□ -0.66
RIF1-202ENST00000414861 DACT1Q9NYF0 836 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 HPSEQ9Y251 543 aa10.95□□□□□ -0.66
RIF1-202ENST00000414861 A0A087X0B3 334 aa10.94□□□□□ -0.66
RIF1-202ENST00000414861 EDNRBP24530 442 aa10.94□□□□□ -0.66
RIF1-202ENST00000414861 FAM160A1Q05DH4 1040 aa10.94□□□□□ -0.66
RIF1-202ENST00000414861 GRB14Q14449 540 aa10.94□□□□□ -0.66
RIF1-202ENST00000414861 FMR1NBQ8N0W7 255 aaPredicted RBP10.94□□□□□ -0.66
RIF1-202ENST00000414861 IGSF22Q8N9C0 903 aa10.94□□□□□ -0.66
RIF1-202ENST00000414861 FAM237AA0A1B0GTK4 181 aa10.94□□□□□ -0.66
RIF1-202ENST00000414861 CTGFP29279 349 aa10.94□□□□□ -0.66
RIF1-202ENST00000414861 MAPK4P31152 587 aa10.94□□□□□ -0.66
RIF1-202ENST00000414861 FXR2P51116 673 aaKnown RBP eCLIP10.94□□□□□ -0.662e-8■■■■■ 29.3
RIF1-202ENST00000414861 SETQ01105 290 aaPredicted RBP10.94□□□□□ -0.66
RIF1-202ENST00000414861 SPIRE1Q08AE8 756 aa10.94□□□□□ -0.66
RIF1-202ENST00000414861 SEMA3FQ13275 785 aa10.94□□□□□ -0.66
RIF1-202ENST00000414861 SKOR2Q2VWA4 1001 aaPredicted RBP10.94□□□□□ -0.66
RIF1-202ENST00000414861 CCDC73Q6ZRK6 1079 aa10.94□□□□□ -0.66
RIF1-202ENST00000414861 PLEKHH3Q7Z736 793 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms