RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 OR6J1Q8NGC5 347 aa19.48■□□□□ 0.71
SCAMP4-204ENST00000414057 IWS1Q96ST2 819 aa19.48■□□□□ 0.71
SCAMP4-204ENST00000414057 MAP3K20Q9NYL2 800 aaKnown RBP19.48■□□□□ 0.71
SCAMP4-204ENST00000414057 STXBP5LQ9Y2K9 1186 aa19.48■□□□□ 0.71
SCAMP4-204ENST00000414057 ZBTB5O15062 677 aa19.48■□□□□ 0.71
SCAMP4-204ENST00000414057 KPNA6O60684 536 aa19.48■□□□□ 0.71
SCAMP4-204ENST00000414057 CD4P01730 458 aa19.48■□□□□ 0.71
SCAMP4-204ENST00000414057 WTAPQ15007 396 aa19.48■□□□□ 0.71
SCAMP4-204ENST00000414057 SYTL5Q8TDW5 730 aaPredicted RBP19.48■□□□□ 0.71
SCAMP4-204ENST00000414057 LY9Q9HBG7 655 aa19.48■□□□□ 0.71
SCAMP4-204ENST00000414057 LRRC37A2A6NM11 1700 aa19.47■□□□□ 0.71
SCAMP4-204ENST00000414057 KLF18A0A0U1RQI7 1052 aa19.47■□□□□ 0.71
SCAMP4-204ENST00000414057 PALM3A6NDB9 673 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-204ENST00000414057 TXNP10599 105 aaKnown RBP19.47■□□□□ 0.71
SCAMP4-204ENST00000414057 STXBP2Q15833 593 aa19.47■□□□□ 0.71
SCAMP4-204ENST00000414057 STAG2Q8N3U4 1231 aa19.47■□□□□ 0.71
SCAMP4-204ENST00000414057 SAMD3Q8N6K7 520 aa19.47■□□□□ 0.71
SCAMP4-204ENST00000414057 MTG1Q9BT17 334 aaPredicted RBP19.47■□□□□ 0.71
SCAMP4-204ENST00000414057 PPP1R12CQ9BZL4 782 aa19.47■□□□□ 0.71
SCAMP4-204ENST00000414057 MAD2L2Q9UI95 211 aa19.47■□□□□ 0.71
SCAMP4-204ENST00000414057 NID2Q14112 1375 aa19.46■□□□□ 0.71
SCAMP4-204ENST00000414057 CCDC69A6NI79 296 aa19.46■□□□□ 0.71
SCAMP4-204ENST00000414057 SUPT20HL2P0C7V6 817 aa19.46■□□□□ 0.71
SCAMP4-204ENST00000414057 ST3GAL1Q11201 340 aa19.46■□□□□ 0.71
SCAMP4-204ENST00000414057 STK3Q13188 491 aa19.46■□□□□ 0.71
SCAMP4-204ENST00000414057 TMEM63BQ5T3F8 832 aa19.46■□□□□ 0.71
SCAMP4-204ENST00000414057 ARHGEF16Q5VV41 709 aa19.46■□□□□ 0.71
SCAMP4-204ENST00000414057 SYNE3Q6ZMZ3 975 aa19.46■□□□□ 0.71
SCAMP4-204ENST00000414057 NFXL1Q6ZNB6 911 aa19.46■□□□□ 0.71
SCAMP4-204ENST00000414057 CATIPQ7Z7H3 387 aa19.46■□□□□ 0.71
SCAMP4-204ENST00000414057 NECAB1Q8N987 351 aa19.46■□□□□ 0.71
SCAMP4-204ENST00000414057 RMDN3Q96TC7 470 aa19.46■□□□□ 0.71
SCAMP4-204ENST00000414057 KIF3AQ9Y496 699 aa19.46■□□□□ 0.71
SCAMP4-204ENST00000414057 GOLGA8BA8MQT2 603 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 CFBP00751 764 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 MYL3P08590 195 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 PDCP20941 246 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 EPHB4P54760 987 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 HMGN5P82970 282 aaKnown RBP19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 PURAQ00577 322 aaKnown RBP19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 SCRN1Q12765 414 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 GRM4Q14833 912 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 PSRC1Q6PGN9 363 aaPredicted RBP19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 APOA5Q6Q788 366 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 TBC1D5Q92609 795 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 MTMR8Q96EF0 704 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 TAAR1Q96RJ0 339 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 HIPK3Q9H422 1215 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 PCDHA1Q9Y5I3 950 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 SLC12A7Q9Y666 1083 aa19.45■□□□□ 0.7
SCAMP4-204ENST00000414057 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.44■□□□□ 0.7
SCAMP4-204ENST00000414057 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.44■□□□□ 0.7
SCAMP4-204ENST00000414057 PTGS1P23219 599 aa19.44■□□□□ 0.7
SCAMP4-204ENST00000414057 BRPF3Q9ULD4 1205 aa19.44■□□□□ 0.7
SCAMP4-204ENST00000414057 GRIN2DO15399 1336 aa19.44■□□□□ 0.7
SCAMP4-204ENST00000414057 LCTP09848 1927 aa19.44■□□□□ 0.7
SCAMP4-204ENST00000414057 TMEM265A0A087WTH1 108 aa19.43■□□□□ 0.7
SCAMP4-204ENST00000414057 A6NJR5 290 aa19.43■□□□□ 0.7
SCAMP4-204ENST00000414057 ZBTB43O43298 467 aa19.43■□□□□ 0.7
SCAMP4-204ENST00000414057 B4GALT4O60513 344 aa19.43■□□□□ 0.7
SCAMP4-204ENST00000414057 CSF2RAP15509 400 aa19.43■□□□□ 0.7
SCAMP4-204ENST00000414057 GJB2P29033 226 aa19.43■□□□□ 0.7
SCAMP4-204ENST00000414057 PSMC6P62333 389 aa19.43■□□□□ 0.7
SCAMP4-204ENST00000414057 SEPT14Q6ZU15 432 aa19.43■□□□□ 0.7
SCAMP4-204ENST00000414057 SLC17A8Q8NDX2 589 aa19.43■□□□□ 0.7
SCAMP4-204ENST00000414057 MTIF3Q9H2K0 278 aaKnown RBP19.43■□□□□ 0.7
SCAMP4-204ENST00000414057 RIOX1Q9H6W3 641 aa19.43■□□□□ 0.7
SCAMP4-204ENST00000414057 COL20A1Q9P218 1284 aa19.43■□□□□ 0.7
SCAMP4-204ENST00000414057 NAP1L2Q9ULW6 460 aaPredicted RBP19.43■□□□□ 0.7
SCAMP4-204ENST00000414057 EIF3JO75822 258 aaKnown RBP19.42■□□□□ 0.7
SCAMP4-204ENST00000414057 CDKL5O76039 1030 aa19.42■□□□□ 0.7
SCAMP4-204ENST00000414057 METAP2P50579 478 aaKnown RBP eCLIP19.42■□□□□ 0.74e-7■■□□□ 12
SCAMP4-204ENST00000414057 HSD17B4P51659 736 aa19.42■□□□□ 0.7
SCAMP4-204ENST00000414057 GHRHRQ02643 423 aa19.42■□□□□ 0.7
SCAMP4-204ENST00000414057 TROAPQ12815 778 aa19.42■□□□□ 0.7
SCAMP4-204ENST00000414057 CPLX2Q6PUV4 134 aaKnown RBP19.42■□□□□ 0.7
SCAMP4-204ENST00000414057 HOMER1Q86YM7 354 aa19.42■□□□□ 0.7
SCAMP4-204ENST00000414057 SMARCC2Q8TAQ2 1214 aa19.42■□□□□ 0.7
SCAMP4-204ENST00000414057 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.42■□□□□ 0.71e-8■□□□□ 8.6
SCAMP4-204ENST00000414057 GH1P01241 217 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 CALM1P0DP23 149 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 CALM2P0DP24 149 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 CALM3P0DP25 149 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 KIF5BP33176 963 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 CYP2C18P33260 490 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 PTPN11Q06124 597 aaPredicted RBP19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 CCDC62Q6P9F0 684 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 FAM161BQ96MY7 647 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 MAP3K14Q99558 947 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 TRPV6Q9H1D0 765 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 IL23AQ9NPF7 189 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 PXMP2Q9NR77 195 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 PNMA6FA0A0J9YX94 578 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 CCDC196A0A1B0GTZ2 297 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 CPLX1O14810 134 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 NR3C2P08235 984 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 EIF2AK2P19525 551 aaKnown RBP19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 TMEM240Q5SV17 173 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 NFRKBQ6P4R8 1299 aa19.41■□□□□ 0.7
SCAMP4-204ENST00000414057 KCNV1Q6PIU1 500 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms