RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 MYL3P08590 195 aa17.08■□□□□ 0.32
LIMS4-201ENST00000413601 CLTBP09497 229 aa17.08■□□□□ 0.32
LIMS4-201ENST00000413601 CDC27P30260 824 aa17.08■□□□□ 0.32
LIMS4-201ENST00000413601 CPT1AP50416 773 aa17.08■□□□□ 0.32
LIMS4-201ENST00000413601 FAAP100Q0VG06 881 aa17.08■□□□□ 0.32
LIMS4-201ENST00000413601 FUT2Q10981 343 aa17.08■□□□□ 0.32
LIMS4-201ENST00000413601 RUFY3Q7L099 469 aa17.08■□□□□ 0.32
LIMS4-201ENST00000413601 HEATR3Q7Z4Q2 680 aa17.08■□□□□ 0.32
LIMS4-201ENST00000413601 VSIG10LQ86VR7 867 aa17.08■□□□□ 0.32
LIMS4-201ENST00000413601 SMARCC2Q8TAQ2 1214 aa17.08■□□□□ 0.32
LIMS4-201ENST00000413601 GPKOWQ92917 476 aaPredicted RBP eCLIP17.08■□□□□ 0.32
LIMS4-201ENST00000413601 CUL5Q93034 780 aa17.08■□□□□ 0.32
LIMS4-201ENST00000413601 TOX2Q96NM4 488 aa17.08■□□□□ 0.32
LIMS4-201ENST00000413601 UBE2OQ9C0C9 1292 aaKnown RBP17.08■□□□□ 0.32
LIMS4-201ENST00000413601 SCN10AQ9Y5Y9 1956 aa17.08■□□□□ 0.32
LIMS4-201ENST00000413601 GRIN2DO15399 1336 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 MROH7Q68CQ1 1323 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 MEIS2O14770 477 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 RGS20O76081 388 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 CCND2P30279 289 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 METAP2P50579 478 aaKnown RBP eCLIP17.07■□□□□ 0.32
LIMS4-201ENST00000413601 RCAN1P53805 252 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 PSMC6P62333 389 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 ITGA7Q13683 1181 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 FBXL16Q8N461 479 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 AGXT2Q9BYV1 514 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 PSTPIP2Q9H939 334 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 ZSWIM6Q9HCJ5 1215 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 TMEM39AQ9NV64 488 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 POLR3EQ9NVU0 708 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 DDX41Q9UJV9 622 aaKnown RBP17.07■□□□□ 0.32
LIMS4-201ENST00000413601 MRVI1Q9Y6F6 885 aa17.07■□□□□ 0.32
LIMS4-201ENST00000413601 V9GY48 417 aaPredicted RBP17.07■□□□□ 0.32
LIMS4-201ENST00000413601 FRMPD4Q14CM0 1322 aa17.06■□□□□ 0.32
LIMS4-201ENST00000413601 A0A1W2PPC1 479 aa17.06■□□□□ 0.32
LIMS4-201ENST00000413601 A6NJR5 290 aa17.06■□□□□ 0.32
LIMS4-201ENST00000413601 PIK3CDO00329 1044 aa17.06■□□□□ 0.32
LIMS4-201ENST00000413601 GH1P01241 217 aa17.06■□□□□ 0.32
LIMS4-201ENST00000413601 ADD1P35611 737 aaKnown RBP17.06■□□□□ 0.32
LIMS4-201ENST00000413601 FXR1P51114 621 aaKnown RBP eCLIP17.06■□□□□ 0.32
LIMS4-201ENST00000413601 PURAQ00577 322 aaKnown RBP17.06■□□□□ 0.32
LIMS4-201ENST00000413601 ARHGAP1Q07960 439 aa17.06■□□□□ 0.32
LIMS4-201ENST00000413601 BRDTQ58F21 947 aaPredicted RBP17.06■□□□□ 0.32
LIMS4-201ENST00000413601 WWC2Q6AWC2 1192 aa17.06■□□□□ 0.32
LIMS4-201ENST00000413601 SLC43A3Q8NBI5 491 aa17.06■□□□□ 0.32
LIMS4-201ENST00000413601 BADQ92934 168 aa17.06■□□□□ 0.32
LIMS4-201ENST00000413601 CYP46A1Q9Y6A2 500 aa17.06■□□□□ 0.32
LIMS4-201ENST00000413601 KIAA0355O15063 1070 aa17.05■□□□□ 0.32
LIMS4-201ENST00000413601 ITGB8P26012 769 aa17.05■□□□□ 0.32
LIMS4-201ENST00000413601 MRPS9P82933 396 aaKnown RBP17.05■□□□□ 0.32
LIMS4-201ENST00000413601 FAM126BQ8IXS8 530 aa17.05■□□□□ 0.32
LIMS4-201ENST00000413601 AFG1LQ8WV93 481 aa17.05■□□□□ 0.32
LIMS4-201ENST00000413601 UPF3BQ9BZI7 483 aaKnown RBP17.05■□□□□ 0.32
LIMS4-201ENST00000413601 CCDC196A0A1B0GTZ2 297 aa17.04■□□□□ 0.32
LIMS4-201ENST00000413601 RAG1P15918 1043 aa17.04■□□□□ 0.32
LIMS4-201ENST00000413601 TOB2Q14106 344 aaPredicted RBP17.04■□□□□ 0.32
LIMS4-201ENST00000413601 UBE2SQ16763 222 aa17.04■□□□□ 0.32
LIMS4-201ENST00000413601 TDHQ8IZJ6 230 aa17.04■□□□□ 0.32
LIMS4-201ENST00000413601 MTG1Q9BT17 334 aaPredicted RBP17.04■□□□□ 0.32
LIMS4-201ENST00000413601 TM6SF1Q9BZW5 370 aa17.04■□□□□ 0.32
LIMS4-201ENST00000413601 RTEL1Q9NZ71 1219 aa17.04■□□□□ 0.32
LIMS4-201ENST00000413601 NID2Q14112 1375 aa17.03■□□□□ 0.32
LIMS4-201ENST00000413601 TLR3O15455 904 aaKnown RBP17.03■□□□□ 0.32
LIMS4-201ENST00000413601 SORBS3O60504 671 aa17.03■□□□□ 0.32
LIMS4-201ENST00000413601 KPNA6O60684 536 aa17.03■□□□□ 0.32
LIMS4-201ENST00000413601 CD4P01730 458 aa17.03■□□□□ 0.32
LIMS4-201ENST00000413601 MMP3P08254 477 aa17.03■□□□□ 0.32
LIMS4-201ENST00000413601 PDIA3P30101 505 aaKnown RBP17.03■□□□□ 0.32
LIMS4-201ENST00000413601 NAPAP54920 295 aa17.03■□□□□ 0.32
LIMS4-201ENST00000413601 SP2Q02086 613 aa17.03■□□□□ 0.32
LIMS4-201ENST00000413601 TYW1BQ6NUM6 668 aa17.03■□□□□ 0.32
LIMS4-201ENST00000413601 KCNV1Q6PIU1 500 aa17.03■□□□□ 0.32
LIMS4-201ENST00000413601 DHX37Q8IY37 1157 aaKnown RBP17.03■□□□□ 0.32
LIMS4-201ENST00000413601 PPP1R13LQ8WUF5 828 aa17.03■□□□□ 0.32
LIMS4-201ENST00000413601 LARP6Q9BRS8 491 aaKnown RBP17.03■□□□□ 0.32
LIMS4-201ENST00000413601 TBX21Q9UL17 535 aa17.03■□□□□ 0.32
LIMS4-201ENST00000413601 STXBP3O00186 592 aa17.02■□□□□ 0.32
LIMS4-201ENST00000413601 STAM2O75886 525 aa17.02■□□□□ 0.32
LIMS4-201ENST00000413601 EVCP57679 992 aa17.02■□□□□ 0.32
LIMS4-201ENST00000413601 LAMC2Q13753 1193 aa17.02■□□□□ 0.32
LIMS4-201ENST00000413601 NBPF20Q3BBV1 942 aa17.02■□□□□ 0.32
LIMS4-201ENST00000413601 PCNX4Q63HM2 1172 aa17.02■□□□□ 0.32
LIMS4-201ENST00000413601 SEZ6LQ9BYH1 1024 aa17.02■□□□□ 0.32
LIMS4-201ENST00000413601 TRPV6Q9H1D0 765 aa17.02■□□□□ 0.32
LIMS4-201ENST00000413601 TRIP12Q14669 1992 aaPredicted RBP17.02■□□□□ 0.31
LIMS4-201ENST00000413601 RANBP2P49792 3224 aaKnown RBP17.02■□□□□ 0.31
LIMS4-201ENST00000413601 SPDYE3A6NKU9 549 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 hCG_1984214I3L0E3 225 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 SOX1O00570 391 aaPredicted RBP17.01■□□□□ 0.31
LIMS4-201ENST00000413601 B4GALT4O60513 344 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 GGPS1O95749 300 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 TIMP1P01033 207 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 TGFB3P10600 412 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 UBA1P22314 1058 aaKnown RBP17.01■□□□□ 0.31
LIMS4-201ENST00000413601 CHMP4BP1P59074 171 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 CCT2P78371 535 aaKnown RBP17.01■□□□□ 0.31
LIMS4-201ENST00000413601 PFKFB3Q16875 520 aaPredicted RBP17.01■□□□□ 0.31
LIMS4-201ENST00000413601 GNPTABQ3T906 1256 aa17.01■□□□□ 0.31
LIMS4-201ENST00000413601 CELF3Q5SZQ8 465 aaKnown RBP17.01■□□□□ 0.31
LIMS4-201ENST00000413601 MYSM1Q5VVJ2 828 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms