RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 NKX3-2P78367 333 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 EXOSC10Q01780 885 aaKnown RBP9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 GHRHRQ02643 423 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 KCNA10Q16322 511 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 TRIM60Q495X7 471 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 CASC1Q6TDU7 716 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 SH3RF1Q7Z6J0 888 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 CATIPQ7Z7H3 387 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 CMTR1Q8N1G2 835 aaKnown RBP9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 NUP133Q8WUM0 1156 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 PIBF1Q8WXW3 757 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 TMEM87BQ96K49 555 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 MTA3Q9BTC8 594 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 VTA1Q9NP79 307 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 PNMA2Q9UL42 364 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 BRPF3Q9ULD4 1205 aa9.92□□□□□ -0.82
HERPUD2-203ENST00000413517 SCN5AQ14524 2016 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 RBM47A0AV96 593 aaKnown RBP9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 POM121CA8CG34 1229 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 ARIH2O95376 493 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 HOXA13P31271 388 aaPredicted RBP9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 HSPA4P34932 840 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 FXR1P51114 621 aaKnown RBP eCLIP9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 HSD17B4P51659 736 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 TNFAIP2Q03169 654 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 TLE2Q04725 743 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 APOA5Q6Q788 366 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 RNF180Q86T96 592 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 TLK2Q86UE8 772 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 SGMS1Q86VZ5 419 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 SRBD1Q8N5C6 995 aaKnown RBP9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 IL31RAQ8NI17 732 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 COPS5Q92905 334 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 NEK1Q96PY6 1258 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 AMNQ9BXJ7 453 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 PDLIM7Q9NR12 457 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 ADD3Q9UEY8 706 aaKnown RBP9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 ATP11BQ9Y2G3 1177 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 MRPL11Q9Y3B7 192 aaKnown RBP9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 PCDHA1Q9Y5I3 950 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 SNX14Q9Y5W7 946 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 SZT2Q5T011 3432 aa9.91□□□□□ -0.82
HERPUD2-203ENST00000413517 LOC102724159A0A0B4J2E5 919 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 PNMA6FA0A0J9YX94 578 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 hCG_1642624A0A1W2PR95 340 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 CFBP00751 764 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 ASGR1P07306 291 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 ITGB8P26012 769 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 PWP2Q15269 919 aaKnown RBP9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 DUSP28Q4G0W2 176 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 GNASQ5JWF2 1037 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 RNF20Q5VTR2 975 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 C1orf53Q5VUE5 145 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 ERICH6BQ5W0A0 696 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 IQSEC1Q6DN90 963 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 NFXL1Q6ZNB6 911 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 DNERQ8NFT8 737 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 TET1Q8NFU7 2136 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 NLRP7Q8WX94 980 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 MAP3K14Q99558 947 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 TSEN34Q9BSV6 310 aaKnown RBP9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 SPZ1Q9BXG8 430 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 LIMD1Q9UGP4 676 aa9.9□□□□□ -0.82
HERPUD2-203ENST00000413517 GRIN2DO15399 1336 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 CNTNAP5Q8WYK1 1306 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 TRIM43BA6NCK2 446 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 MOXD2PA6NHM9 499 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 CCDC69A6NI79 296 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 SOX1O00570 391 aaPredicted RBP9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 DYNC1LI2O43237 492 aaPredicted RBP9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 RGS20O76081 388 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 CENPBP07199 599 aaPredicted RBP9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 EIF2AK2P19525 551 aaKnown RBP9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 FUT2Q10981 343 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 FSCN1Q16658 493 aaKnown RBP9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 CCDC62Q6P9F0 684 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 TMTC3Q6ZXV5 915 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 NOL8Q76FK4 1167 aaKnown RBP9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 DHX32Q7L7V1 743 aaKnown RBP9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 MICU3Q86XE3 530 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 CTCFLQ8NI51 663 aaPredicted RBP9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 TRIM43Q96BQ3 446 aaPredicted RBP9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 RMDN3Q96TC7 470 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 WDR11Q9BZH6 1224 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 PXMP2Q9NR77 195 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 MYO9BQ13459 2157 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 WDR81Q562E7 1941 aa9.89□□□□□ -0.83
HERPUD2-203ENST00000413517 GBF1Q92538 1859 aa9.88□□□□□ -0.83
HERPUD2-203ENST00000413517 TANC1Q9C0D5 1861 aa9.88□□□□□ -0.83
HERPUD2-203ENST00000413517 SLC34A2O95436 690 aa9.88□□□□□ -0.83
HERPUD2-203ENST00000413517 NR3C2P08235 984 aa9.88□□□□□ -0.83
HERPUD2-203ENST00000413517 CDC27P30260 824 aa9.88□□□□□ -0.83
HERPUD2-203ENST00000413517 KIF5BP33176 963 aa9.88□□□□□ -0.83
HERPUD2-203ENST00000413517 CDK7P50613 346 aa9.88□□□□□ -0.83
HERPUD2-203ENST00000413517 CXCL17Q6UXB2 119 aa9.88□□□□□ -0.83
HERPUD2-203ENST00000413517 MCF2L2Q86YR7 1114 aa9.88□□□□□ -0.83
HERPUD2-203ENST00000413517 TMTC2Q8N394 836 aa9.88□□□□□ -0.83
HERPUD2-203ENST00000413517 FANCBQ8NB91 859 aa9.88□□□□□ -0.83
HERPUD2-203ENST00000413517 NSUN6Q8TEA1 469 aaKnown RBP9.88□□□□□ -0.83
HERPUD2-203ENST00000413517 PPP1R13LQ8WUF5 828 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms