RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 NAA35Q5VZE5 725 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.73□□□□□ -1.49
HERC4-205ENST00000412272 ATRIPQ8WXE1 791 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 LPIN2Q92539 896 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 SDCCAG3Q96C92 435 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 GIMAP5Q96F15 307 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 ANKRD27Q96NW4 1050 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 UQCC2Q9BRT2 126 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 ABCG4Q9H172 646 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 MTUS1Q9ULD2 1270 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 PALD1Q9ULE6 856 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 AKAP12Q02952 1782 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 CEP170BQ9Y4F5 1589 aaPredicted RBP5.73□□□□□ -1.49
HERC4-205ENST00000412272 SBNO1A3KN83 1393 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 DNAJC8O75937 253 aaPredicted RBP5.73□□□□□ -1.49
HERC4-205ENST00000412272 PYGMP11217 842 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 PCNAP12004 261 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 TMPOP42166 694 aaKnown RBP5.73□□□□□ -1.49
HERC4-205ENST00000412272 DPYSQ14117 519 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 ANKRD20A8PQ5CZ79 823 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 C6orf183Q5T699 404 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 SVIPQ8NHG7 77 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 DPF3Q92784 378 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 TBC1D20Q96BZ9 403 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 FAM20AQ96MK3 541 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 RPS6KC1Q96S38 1066 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 OSBPL7Q9BZF2 842 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 KMT5AQ9NQR1 393 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 CHMP2BQ9UQN3 213 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 DLG5Q8TDM6 1919 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 EIF4E1BA6NMX2 242 aaKnown RBP5.73□□□□□ -1.49
HERC4-205ENST00000412272 BECN2A8MW95 431 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 SNX2O60749 519 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 RNF187Q5TA31 235 aaPredicted RBP5.73□□□□□ -1.49
HERC4-205ENST00000412272 DGLUCYQ7Z3D6 616 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 NOA1Q8NC60 698 aaKnown RBP5.73□□□□□ -1.49
HERC4-205ENST00000412272 API5Q9BZZ5 524 aaKnown RBP5.73□□□□□ -1.49
HERC4-205ENST00000412272 DNAJC25Q9H1X3 360 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.73□□□□□ -1.49
HERC4-205ENST00000412272 PRR12Q9ULL5 1215 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 TLL2Q9Y6L7 1015 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 SLC4A7Q9Y6M7 1214 aa5.73□□□□□ -1.49
HERC4-205ENST00000412272 XRN1Q8IZH2 1706 aaKnown RBP5.73□□□□□ -1.49
HERC4-205ENST00000412272 AGPSO00116 658 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 ARHGAP6O43182 974 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 FIBPO43427 364 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 SERPINB7O75635 380 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 GZMAP12544 262 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 SFPQP23246 707 aaKnown RBP eCLIP5.72□□□□□ -1.49
HERC4-205ENST00000412272 WEE1P30291 646 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 GSTT1P30711 240 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 UBXN2AP68543 259 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 LACTB2Q53H82 288 aaPredicted RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 CMPK2Q5EBM0 449 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 ZMYM1Q5SVZ6 1142 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 GRAMD4Q6IC98 578 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 BRSK2Q8IWQ3 736 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 LARGE2Q8N3Y3 721 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 ARL6IP6Q8N6S5 226 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 TRIML2Q8N7C3 387 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 PPP1R14CQ8TAE6 165 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 AGAP11Q8TF27 550 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 RIN2Q8WYP3 895 aaPredicted RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 NELL1Q92832 810 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 CCDC127Q96BQ5 260 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 PLCB1Q9NQ66 1216 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 ATP8A2Q9NTI2 1148 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 DACT1Q9NYF0 836 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 HPCAL4Q9UM19 191 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 ARIH1Q9Y4X5 557 aaPredicted RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 PRG4Q92954 1404 aaPredicted RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 MED1Q15648 1581 aaPredicted RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 KIF1BO60333 1816 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 hCG_2014768A0A024R1R8 64 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 PLEKHG3A1L390 1219 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 CCDC162PA2VCL2 907 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 FLOT1O75955 427 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 MYL6BP14649 208 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 PRKACBP22694 351 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 ANXA13P27216 316 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 KRT9P35527 623 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 CENPAP49450 140 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 NLRP12P59046 1061 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 VSNL1P62760 191 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 PDE1BQ01064 536 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 LSAMPQ13449 338 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 STIM1Q13586 685 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 CCDC14Q49A88 953 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 ALS2CLQ60I27 953 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 TMEM214Q6NUQ4 689 aaKnown RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 C11orf57Q6ZUT1 292 aaPredicted RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 RUFY3Q7L099 469 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 NT5DC4Q86YG4 428 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 CCDC110Q8TBZ0 833 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 P3H4Q92791 437 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 HAPLN3Q96S86 360 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 CNNM2Q9H8M5 875 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 PSTPIP2Q9H939 334 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 KCNMB3Q9NPA1 279 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 RMND1Q9NWS8 449 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms