RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 TMEM240Q5SV17 173 aa13.43□□□□□ -0.26
LINC00963-201ENST00000412141 SCLYQ96I15 445 aa13.43□□□□□ -0.26
LINC00963-201ENST00000412141 CCDC136Q96JN2 1154 aa13.43□□□□□ -0.26
LINC00963-201ENST00000412141 TCEANC2Q96MN5 208 aa13.43□□□□□ -0.26
LINC00963-201ENST00000412141 GUCD1Q96NT3 240 aa13.43□□□□□ -0.26
LINC00963-201ENST00000412141 NOC4LQ9BVI4 516 aaKnown RBP13.43□□□□□ -0.26
LINC00963-201ENST00000412141 SPTBN5Q9NRC6 3674 aaKnown RBP13.43□□□□□ -0.26
LINC00963-201ENST00000412141 KIF5BP33176 963 aa13.42□□□□□ -0.26
LINC00963-201ENST00000412141 ARHGAP1Q07960 439 aa13.42□□□□□ -0.26
LINC00963-201ENST00000412141 OTOP2Q7RTS6 562 aa13.42□□□□□ -0.26
LINC00963-201ENST00000412141 RRP36Q96EU6 259 aaKnown RBP13.42□□□□□ -0.26
LINC00963-201ENST00000412141 PDCD2LQ9BRP1 358 aa13.42□□□□□ -0.26
LINC00963-201ENST00000412141 SEMA6BQ9H3T3 888 aa13.42□□□□□ -0.26
LINC00963-201ENST00000412141 DDX41Q9UJV9 622 aaKnown RBP13.42□□□□□ -0.26
LINC00963-201ENST00000412141 RBAK-RBAKDNI3L0D1 243 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 KPNA6O60684 536 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 DDAH1O94760 285 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 MMP3P08254 477 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 SMAD3P84022 425 aaKnown RBP13.41□□□□□ -0.26
LINC00963-201ENST00000412141 TRAF1Q13077 416 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 PGM5Q15124 567 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 USP17L6PQ6QN14 398 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 DEFB128Q7Z7B8 93 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 DHX37Q8IY37 1157 aaKnown RBP13.41□□□□□ -0.26
LINC00963-201ENST00000412141 SRBD1Q8N5C6 995 aaKnown RBP13.41□□□□□ -0.26
LINC00963-201ENST00000412141 GPKOWQ92917 476 aaPredicted RBP eCLIP13.41□□□□□ -0.26
LINC00963-201ENST00000412141 TMEM87BQ96K49 555 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 ALG1Q9BT22 464 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 MAF1Q9H063 256 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 WNT8AQ9H1J5 351 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 TTYH1Q9H313 450 aaPredicted RBP13.41□□□□□ -0.26
LINC00963-201ENST00000412141 IL23AQ9NPF7 189 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 RTEL1Q9NZ71 1219 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 SEC63Q9UGP8 760 aaKnown RBP13.41□□□□□ -0.26
LINC00963-201ENST00000412141 NOD1Q9Y239 953 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 SLC12A7Q9Y666 1083 aa13.41□□□□□ -0.26
LINC00963-201ENST00000412141 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.4□□□□□ -0.26
LINC00963-201ENST00000412141 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.4□□□□□ -0.26
LINC00963-201ENST00000412141 CDC45O75419 566 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 RGS20O76081 388 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 FGBP02675 491 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 SUPT20HL2P0C7V6 817 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 ZNF286BP0CG31 522 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 CCND2P30279 289 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 PBX2P40425 430 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 RNF20Q5VTR2 975 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 PSRC1Q6PGN9 363 aaPredicted RBP13.4□□□□□ -0.26
LINC00963-201ENST00000412141 VSIG10LQ86VR7 867 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 MICU3Q86XE3 530 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 RASEFQ8IZ41 740 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 TMTC2Q8N394 836 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 SMARCC2Q8TAQ2 1214 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 MYLIPQ8WY64 445 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 CDX2Q99626 313 aaPredicted RBP13.4□□□□□ -0.26
LINC00963-201ENST00000412141 SPZ1Q9BXG8 430 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 BCAS3Q9H6U6 928 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 CXXC1Q9P0U4 656 aaPredicted RBP13.4□□□□□ -0.26
LINC00963-201ENST00000412141 NAP1L2Q9ULW6 460 aaPredicted RBP13.4□□□□□ -0.26
LINC00963-201ENST00000412141 CUL9Q8IWT3 2517 aa13.4□□□□□ -0.26
LINC00963-201ENST00000412141 ZBBXA8MT70 800 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 GGPS1O95749 300 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 CASTP20810 708 aaKnown RBP13.39□□□□□ -0.27
LINC00963-201ENST00000412141 DNAJB2P25686 324 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 GNAQP50148 359 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 SP2Q02086 613 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 LAMC2Q13753 1193 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 DGKDQ16760 1214 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 ADCK5Q3MIX3 580 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 KAT2BQ92831 832 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 SPATA33Q96N06 139 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 NEK1Q96PY6 1258 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 LZTS2Q9BRK4 669 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 SEZ6LQ9BYH1 1024 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 MYO9BQ13459 2157 aa13.39□□□□□ -0.27
LINC00963-201ENST00000412141 CPA1P15085 419 aa13.38□□□□□ -0.27
LINC00963-201ENST00000412141 LIFRP42702 1097 aa13.38□□□□□ -0.27
LINC00963-201ENST00000412141 PSEN2P49810 448 aa13.38□□□□□ -0.27
LINC00963-201ENST00000412141 SP4Q02446 784 aa13.38□□□□□ -0.27
LINC00963-201ENST00000412141 GHRHRQ02643 423 aa13.38□□□□□ -0.27
LINC00963-201ENST00000412141 PTGISQ16647 500 aa13.38□□□□□ -0.27
LINC00963-201ENST00000412141 GDF6Q6KF10 455 aaPredicted RBP13.38□□□□□ -0.27
LINC00963-201ENST00000412141 NFRKBQ6P4R8 1299 aa13.38□□□□□ -0.27
LINC00963-201ENST00000412141 SYNE3Q6ZMZ3 975 aa13.38□□□□□ -0.27
LINC00963-201ENST00000412141 FANCBQ8NB91 859 aa13.38□□□□□ -0.27
LINC00963-201ENST00000412141 RETREG2Q8NC44 543 aa13.38□□□□□ -0.27
LINC00963-201ENST00000412141 CUL5Q93034 780 aa13.38□□□□□ -0.27
LINC00963-201ENST00000412141 MAP3K14Q99558 947 aa13.38□□□□□ -0.27
LINC00963-201ENST00000412141 MLXIPQ9HAP2 919 aa13.38□□□□□ -0.27
LINC00963-201ENST00000412141 MAP3K20Q9NYL2 800 aaKnown RBP13.38□□□□□ -0.27
LINC00963-201ENST00000412141 PRUNE2Q8WUY3 3088 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 CALM1P0DP23 149 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 CALM2P0DP24 149 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 CALM3P0DP25 149 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 UBA1P22314 1058 aaKnown RBP13.37□□□□□ -0.27
LINC00963-201ENST00000412141 MRPS9P82933 396 aaKnown RBP13.37□□□□□ -0.27
LINC00963-201ENST00000412141 ZNF200P98182 395 aaPredicted RBP13.37□□□□□ -0.27
LINC00963-201ENST00000412141 UBE2SQ16763 222 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 KIAA0753Q2KHM9 967 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 HSDL1Q3SXM5 330 aa13.37□□□□□ -0.27
LINC00963-201ENST00000412141 CELF3Q5SZQ8 465 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms