RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 KRT76Q01546 638 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 SMAD2Q15796 467 aaKnown RBP7.7□□□□□ -1.18
LINC00396-201ENST00000411690 TIGD5Q53EQ6 642 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 SMYD5Q6GMV2 418 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 CERS3Q8IU89 383 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 WDR63Q8IWG1 891 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 CCDC144CPQ8IYA2 1237 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 BANK1Q8NDB2 785 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 BAP1Q92560 729 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 KLF16Q9BXK1 252 aaPredicted RBP7.7□□□□□ -1.18
LINC00396-201ENST00000411690 SNRKQ9NRH2 765 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 CLDND1Q9NY35 253 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 GNEQ9Y223 722 aaKnown RBP7.7□□□□□ -1.18
LINC00396-201ENST00000411690 CFAP54Q96N23 3096 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 MYH1P12882 1939 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 COL4A6Q14031 1691 aa7.7□□□□□ -1.18
LINC00396-201ENST00000411690 COL11A1P12107 1806 aaPredicted RBP7.69□□□□□ -1.18
LINC00396-201ENST00000411690 TECTAO75443 2155 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 STXBP3O00186 592 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 MBTPS2O43462 519 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 PPFIA3O75145 1194 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 GJB5O95377 273 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 ADH1CP00326 375 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 DEFB103AP81534 67 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 GABPAQ06546 454 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 NBPF20Q3BBV1 942 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 TCEAL5Q5H9L2 206 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 SNRNP48Q6IEG0 339 aaKnown RBP7.69□□□□□ -1.18
LINC00396-201ENST00000411690 TMEM179Q6ZVK1 233 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 SIAH1Q8IUQ4 282 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 ANKRD35Q8N283 1001 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 MIGA1Q8NAN2 632 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 REPS2Q8NFH8 660 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.69□□□□□ -1.18
LINC00396-201ENST00000411690 CNTNAP3BQ96NU0 1288 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 C17orf80Q9BSJ5 609 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 TEX13BQ9BXU2 312 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 CNTNAP3Q9BZ76 1288 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 KATNBL1Q9H079 304 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 PPP1R9AQ9ULJ8 1098 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 RIPK3Q9Y572 518 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.69□□□□□ -1.18
LINC00396-201ENST00000411690 PTPRCP08575 1304 aa7.69□□□□□ -1.18
LINC00396-201ENST00000411690 ZFHX2Q9C0A1 2572 aaPredicted RBP7.68□□□□□ -1.18
LINC00396-201ENST00000411690 PLXNA3P51805 1871 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 KMT2EQ8IZD2 1858 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 NCK2O43639 380 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 IGSF3O75054 1194 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 CYP2E1P05181 493 aaPredicted RBP7.68□□□□□ -1.18
LINC00396-201ENST00000411690 PTGS1P23219 599 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 NBL1P41271 181 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 ICA1Q05084 483 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 BFSP2Q13515 415 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 COL19A1Q14993 1142 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 CLUL1Q15846 466 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 LRRFIP1Q32MZ4 808 aaKnown RBP7.68□□□□□ -1.18
LINC00396-201ENST00000411690 FAM47CQ5HY64 1035 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 TTC39AQ5SRH9 613 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 DGLUCYQ7Z3D6 616 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 RPAINQ86UA6 219 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 CLEC10AQ8IUN9 316 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 GPIHBP1Q8IV16 184 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 ADSSL1Q8N142 457 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 FGD4Q96M96 766 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 NSUN3Q9H649 340 aaKnown RBP7.68□□□□□ -1.18
LINC00396-201ENST00000411690 PCDHGC3Q9UN70 934 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 HDAC5Q9UQL6 1122 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 Q9Y3F1 56 aa7.68□□□□□ -1.18
LINC00396-201ENST00000411690 SIP14410 1827 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 PARP14Q460N5 1801 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 RAD21O60216 631 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 MS4A1P11836 297 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 LTBRP36941 435 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 SIGLEC14Q08ET2 396 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 DDX10Q13206 875 aaKnown RBP7.67□□□□□ -1.18
LINC00396-201ENST00000411690 EPC2Q52LR7 807 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 IQSEC1Q6DN90 963 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 FAM117BQ6P1L5 589 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 CPXCR1Q8N123 301 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 ZNF511Q8NB15 262 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 NKD2Q969F2 451 aaPredicted RBP7.67□□□□□ -1.18
LINC00396-201ENST00000411690 ZFAND3Q9H8U3 227 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 POLR3EQ9NVU0 708 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 NOD1Q9Y239 953 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 INSL6Q9Y581 213 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 CTDP1Q9Y5B0 961 aaPredicted RBP7.67□□□□□ -1.18
LINC00396-201ENST00000411690 SPTBN4Q9H254 2564 aa7.67□□□□□ -1.18
LINC00396-201ENST00000411690 PTPRZ1P23471 2315 aaPredicted RBP7.67□□□□□ -1.18
LINC00396-201ENST00000411690 PTPRSQ13332 1948 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 ABHD14A-ACY1A0A1B0GW23 586 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 ASB14A6NK59 587 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 H3BNC9 293 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 ATP2A1O14983 1001 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 MAN1A2O60476 641 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 MYL3P08590 195 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 ZAP70P43403 619 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 PURAQ00577 322 aaKnown RBP7.66□□□□□ -1.18
LINC00396-201ENST00000411690 CNTN2Q02246 1040 aa7.66□□□□□ -1.18
LINC00396-201ENST00000411690 DLX2Q07687 328 aaPredicted RBP7.66□□□□□ -1.18
LINC00396-201ENST00000411690 SMAD4Q13485 552 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms