RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 PMF1Q6P1K2 205 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 UNC45BQ8IWX7 931 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 KIAA1958Q8N8K9 716 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 MINDY2Q8NBR6 621 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 METTL6Q8TCB7 284 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 SMG7Q92540 1137 aaKnown RBP5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 VPS39Q96JC1 886 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 ABCG8Q9H221 673 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 SH3GLB1Q9Y371 365 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 PMF1-BGLAPU3KQ54 211 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 FAM177BA6PVY3 158 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 HIP1O00291 1037 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 DNALI1O14645 258 aaPredicted RBP5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 OPHN1O60890 802 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 ARIH2O95376 493 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 ASS1P00966 412 aaKnown RBP5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 CKBP12277 381 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 ZNF24P17028 368 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 ATF7P17544 494 aaPredicted RBP5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 ATP5OP48047 213 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 CTCFP49711 727 aaPredicted RBP5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 MTTPP55157 894 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 DHX34Q14147 1143 aaKnown RBP5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 IYDQ6PHW0 289 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 FAM149B1Q96BN6 582 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 ART5Q96L15 291 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 TSEN34Q9BSV6 310 aaKnown RBP5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 KRT23Q9C075 422 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 EHD2Q9NZN4 543 aa5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 KIAA1522Q9P206 1035 aaPredicted RBP5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.69□□□□□ -1.5
R3HDM1-204ENST00000410054 CCDC169A6NNP5 214 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 INO80B-WBP1J3KQ70 363 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 XPO1O14980 1071 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 PSIP1O75475 530 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 INMTO95050 263 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 TUBB4AP04350 444 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 RIPK4P57078 832 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 GMFBP60983 142 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 IFIT5Q13325 482 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 MYBPC3Q14896 1274 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 MAPRE1Q15691 268 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 TMEM266Q2M3C6 531 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 SWSAP1Q6NVH7 229 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 MFSD6Q6ZSS7 791 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 CHERPQ8IWX8 916 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 RNF169Q8NCN4 708 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 CCDC12Q8WUD4 166 aaPredicted RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 PIGKQ92643 395 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 CDKL2Q92772 493 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 RADILQ96JH8 1075 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 FAM161BQ96MY7 647 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 IER2Q9BTL4 223 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 APOL5Q9BWW9 433 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 TMEM245Q9H330 911 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 TUBB1Q9H4B7 451 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 KLHL31Q9H511 634 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 EPB41L4AQ9HCS5 686 aaPredicted RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 ZMYND8Q9ULU4 1186 aaPredicted RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 HPCAL4Q9UM19 191 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 SPATA2Q9UM82 520 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 RAD50Q92878 1312 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 CFAP69A5D8W1 941 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 BUB1O43683 1085 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 AHCYL1O43865 530 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 GNAT1P11488 350 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 P4HA1P13674 534 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 RASA1P20936 1047 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 TUBB4BP68371 445 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 VAC14Q08AM6 782 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 WRNQ14191 1432 aaPredicted RBP eCLIP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 SLFNL1Q499Z3 407 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 ANO5Q75V66 913 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 XXYLT1Q8NBI6 393 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 SPATA18Q8TC71 538 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 PNPT1Q8TCS8 783 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 EPS8L1Q8TE68 723 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 MAML1Q92585 1016 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 RRP36Q96EU6 259 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 TTC25Q96NG3 672 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 TDRD1Q9BXT4 1180 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 BRD8Q9H0E9 1235 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 SERHL2Q9H4I8 314 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 PICK1Q9NRD5 415 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 GID8Q9NWU2 228 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 XPO7Q9UIA9 1087 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 TMEM191CA6NGB0 347 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 FAM47DPA6NHR8 397 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 TBKBP1A7MCY6 615 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 FAM25EA8MYX2 175 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 NPIPA7E9PJI5 369 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 H0YCG3 227 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 SCAMP3O14828 347 aaKnown RBP5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 PRMT3O60678 531 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 RAPGEF3O95398 923 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 TMEM191BP0C7N4 346 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 SLFN14P0C7P3 912 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 NPIPA8P0DM63 369 aa5.68□□□□□ -1.5
R3HDM1-204ENST00000410054 RAB14P61106 215 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms