RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 MBOAT7Q96N66 472 aa17.34■□□□□ 0.37
LSM5-207ENST00000410044 NAP1L4Q99733 375 aaKnown RBP17.34■□□□□ 0.37
LSM5-207ENST00000410044 FLRT1Q9NZU1 646 aa17.34■□□□□ 0.37
LSM5-207ENST00000410044 CHMP5Q9NZZ3 219 aa17.34■□□□□ 0.37
LSM5-207ENST00000410044 PTPN22Q9Y2R2 807 aa17.34■□□□□ 0.37
LSM5-207ENST00000410044 TRIM17Q9Y577 477 aa17.34■□□□□ 0.37
LSM5-207ENST00000410044 UBIAD1Q9Y5Z9 338 aa17.34■□□□□ 0.37
LSM5-207ENST00000410044 RILPL1Q5EBL4 403 aa17.33■□□□□ 0.36
LSM5-207ENST00000410044 MYSM1Q5VVJ2 828 aa17.33■□□□□ 0.36
LSM5-207ENST00000410044 ARMCX2Q7L311 632 aa17.33■□□□□ 0.36
LSM5-207ENST00000410044 NIPA1Q7RTP0 329 aa17.33■□□□□ 0.36
LSM5-207ENST00000410044 FERMT3Q86UX7 667 aa17.33■□□□□ 0.36
LSM5-207ENST00000410044 PRDM10Q9NQV6 1147 aa17.33■□□□□ 0.36
LSM5-207ENST00000410044 NRBP1Q9UHY1 535 aa17.33■□□□□ 0.36
LSM5-207ENST00000410044 KIAA1217Q5T5P2 1943 aa17.33■□□□□ 0.36
LSM5-207ENST00000410044 MEIS1O00470 390 aa17.32■□□□□ 0.36
LSM5-207ENST00000410044 MAFGO15525 162 aa17.32■□□□□ 0.36
LSM5-207ENST00000410044 GCFC2P16383 781 aaKnown RBP17.32■□□□□ 0.36
LSM5-207ENST00000410044 UBXN2AP68543 259 aa17.32■□□□□ 0.36
LSM5-207ENST00000410044 PDE4DQ08499 809 aa17.32■□□□□ 0.36
LSM5-207ENST00000410044 ORC2Q13416 577 aaPredicted RBP17.32■□□□□ 0.36
LSM5-207ENST00000410044 CCL14Q16627 93 aa17.32■□□□□ 0.36
LSM5-207ENST00000410044 INPP4AQ96PE3 977 aaPredicted RBP17.32■□□□□ 0.36
LSM5-207ENST00000410044 MXRA8Q9BRK3 442 aa17.32■□□□□ 0.36
LSM5-207ENST00000410044 KATNBL1Q9H079 304 aa17.32■□□□□ 0.36
LSM5-207ENST00000410044 ABHD16BQ9H3Z7 469 aa17.32■□□□□ 0.36
LSM5-207ENST00000410044 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.32■□□□□ 0.36
LSM5-207ENST00000410044 NOL7Q9UMY1 257 aaKnown RBP17.32■□□□□ 0.36
LSM5-207ENST00000410044 LRRC37A2A6NM11 1700 aa17.32■□□□□ 0.36
LSM5-207ENST00000410044 IGLV3-22A0A075B6J6 115 aa17.31■□□□□ 0.36
LSM5-207ENST00000410044 RBM47A0AV96 593 aaKnown RBP17.31■□□□□ 0.36
LSM5-207ENST00000410044 ADCY3O60266 1144 aa17.31■□□□□ 0.36
LSM5-207ENST00000410044 RGS20O76081 388 aa17.31■□□□□ 0.36
LSM5-207ENST00000410044 MYCLP12524 364 aaPredicted RBP17.31■□□□□ 0.36
LSM5-207ENST00000410044 ITGB5P18084 799 aa17.31■□□□□ 0.36
LSM5-207ENST00000410044 ICAM3P32942 547 aa17.31■□□□□ 0.36
LSM5-207ENST00000410044 PKN2Q16513 984 aaKnown RBP17.31■□□□□ 0.36
LSM5-207ENST00000410044 Q4G0T1 1027 aa17.31■□□□□ 0.36
LSM5-207ENST00000410044 CEP55Q53EZ4 464 aa17.31■□□□□ 0.36
LSM5-207ENST00000410044 ATL3Q6DD88 541 aa17.31■□□□□ 0.36
LSM5-207ENST00000410044 CTU1Q7Z7A3 348 aaKnown RBP17.31■□□□□ 0.36
LSM5-207ENST00000410044 RAET1EQ8TD07 263 aa17.31■□□□□ 0.36
LSM5-207ENST00000410044 TRIB2Q92519 343 aa17.31■□□□□ 0.36
LSM5-207ENST00000410044 VTA1Q9NP79 307 aa17.31■□□□□ 0.36
LSM5-207ENST00000410044 JADE2Q9NQC1 790 aa17.31■□□□□ 0.36
LSM5-207ENST00000410044 MYH15Q9Y2K3 1946 aa17.3■□□□□ 0.36
LSM5-207ENST00000410044 FAM86B1E9PN63 330 aa17.3■□□□□ 0.36
LSM5-207ENST00000410044 FAM86B2P0C5J1 330 aa17.3■□□□□ 0.36
LSM5-207ENST00000410044 LETM2Q2VYF4 491 aa17.3■□□□□ 0.36
LSM5-207ENST00000410044 MFSD14CQ5VZR4 134 aa17.3■□□□□ 0.36
LSM5-207ENST00000410044 TAPT1Q6NXT6 567 aa17.3■□□□□ 0.36
LSM5-207ENST00000410044 NLRX1Q86UT6 975 aa17.3■□□□□ 0.36
LSM5-207ENST00000410044 SLAIN1Q8ND83 568 aa17.3■□□□□ 0.36
LSM5-207ENST00000410044 GPRASP2Q96D09 838 aa17.3■□□□□ 0.36
LSM5-207ENST00000410044 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.3■□□□□ 0.36
LSM5-207ENST00000410044 SPATA31C2B4DYI2 1134 aa17.29■□□□□ 0.36
LSM5-207ENST00000410044 WNT7AO00755 349 aa17.29■□□□□ 0.36
LSM5-207ENST00000410044 TGFB3P10600 412 aa17.29■□□□□ 0.36
LSM5-207ENST00000410044 ZNF76P36508 570 aa17.29■□□□□ 0.36
LSM5-207ENST00000410044 ACVR2BQ13705 512 aa17.29■□□□□ 0.36
LSM5-207ENST00000410044 TTC38Q5R3I4 469 aa17.29■□□□□ 0.36
LSM5-207ENST00000410044 KCNV1Q6PIU1 500 aa17.29■□□□□ 0.36
LSM5-207ENST00000410044 CYP2W1Q8TAV3 490 aa17.29■□□□□ 0.36
LSM5-207ENST00000410044 LENG9Q96B70 501 aa17.29■□□□□ 0.36
LSM5-207ENST00000410044 RTEL1Q9NZ71 1219 aa17.29■□□□□ 0.36
LSM5-207ENST00000410044 ATP6V1DQ9Y5K8 247 aa17.29■□□□□ 0.36
LSM5-207ENST00000410044 PTCH2Q9Y6C5 1203 aa17.29■□□□□ 0.36
LSM5-207ENST00000410044 DDX49Q9Y6V7 483 aaKnown RBP17.29■□□□□ 0.36
LSM5-207ENST00000410044 TBX3O15119 743 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 CCNT1O60563 726 aaKnown RBP17.28■□□□□ 0.36
LSM5-207ENST00000410044 TDP2O95551 362 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 HMGCRP04035 888 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 ZNF865P0CJ78 1059 aaPredicted RBP17.28■□□□□ 0.36
LSM5-207ENST00000410044 GRK4P32298 578 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 CYP2C19P33261 490 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 SETQ01105 290 aaPredicted RBP17.28■□□□□ 0.36
LSM5-207ENST00000410044 GNPTABQ3T906 1256 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 MAP3K21Q5TCX8 1036 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 IQSEC1Q6DN90 963 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 FAM173BQ6P4H8 233 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 PLA2G4DQ86XP0 818 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 C4orf32Q8N8J7 132 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 CDHR1Q96JP9 859 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 WDR11Q9BZH6 1224 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 CNPY2Q9Y2B0 182 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 PCDHB6Q9Y5E3 794 aa17.28■□□□□ 0.36
LSM5-207ENST00000410044 MORC2Q9Y6X9 1032 aaPredicted RBP17.28■□□□□ 0.36
LSM5-207ENST00000410044 FIBPO43427 364 aa17.27■□□□□ 0.36
LSM5-207ENST00000410044 CYBAP13498 195 aa17.27■□□□□ 0.36
LSM5-207ENST00000410044 SEMA3FQ13275 785 aa17.27■□□□□ 0.36
LSM5-207ENST00000410044 FOXD4L5Q5VV16 416 aaPredicted RBP17.27■□□□□ 0.36
LSM5-207ENST00000410044 CCDC62Q6P9F0 684 aa17.27■□□□□ 0.36
LSM5-207ENST00000410044 FBXO46Q6PJ61 603 aaPredicted RBP17.27■□□□□ 0.36
LSM5-207ENST00000410044 FOXD4L4Q8WXT5 416 aaPredicted RBP17.27■□□□□ 0.36
LSM5-207ENST00000410044 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.36
LSM5-207ENST00000410044 ZNF396Q96N95 335 aaPredicted RBP17.27■□□□□ 0.36
LSM5-207ENST00000410044 SENP7Q9BQF6 1050 aa17.27■□□□□ 0.36
LSM5-207ENST00000410044 KCNH7Q9NS40 1196 aa17.27■□□□□ 0.36
LSM5-207ENST00000410044 DDX25Q9UHL0 483 aaKnown RBP17.27■□□□□ 0.36
LSM5-207ENST00000410044 TCHHQ07283 1943 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms