RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 ZNF185O15231 689 aa18.51■□□□□ 0.55
LIMS2-208ENST00000410011 NFIXQ14938 502 aa18.51■□□□□ 0.55
LIMS2-208ENST00000410011 KRT79Q5XKE5 535 aa18.51■□□□□ 0.55
LIMS2-208ENST00000410011 PLEKP08567 350 aaPredicted RBP18.51■□□□□ 0.55
LIMS2-208ENST00000410011 ATP2B4P23634 1241 aa18.51■□□□□ 0.55
LIMS2-208ENST00000410011 EIF4A3P38919 411 aaKnown RBP18.51■□□□□ 0.55
LIMS2-208ENST00000410011 ADCY7P51828 1080 aa18.51■□□□□ 0.55
LIMS2-208ENST00000410011 KRT26Q7Z3Y9 468 aa18.51■□□□□ 0.55
LIMS2-208ENST00000410011 CCDC24Q8N4L8 307 aa18.51■□□□□ 0.55
LIMS2-208ENST00000410011 AFAP1L1Q8TED9 768 aa18.51■□□□□ 0.55
LIMS2-208ENST00000410011 TSG101Q99816 390 aa18.51■□□□□ 0.55
LIMS2-208ENST00000410011 SELENOOQ9BVL4 669 aa18.51■□□□□ 0.55
LIMS2-208ENST00000410011 RNF14Q9UBS8 474 aa18.51■□□□□ 0.55
LIMS2-208ENST00000410011 HYOU1Q9Y4L1 999 aa18.51■□□□□ 0.55
LIMS2-208ENST00000410011 C10orf71Q711Q0 1435 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 SLC26A4O43511 780 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 TNNT3P45378 269 aaPredicted RBP18.5■□□□□ 0.55
LIMS2-208ENST00000410011 SRLQ86TD4 932 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 HPS3Q969F9 1004 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 CRACR2AQ9BSW2 395 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 TSKSQ9UJT2 592 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 CAPN6Q9Y6Q1 641 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 USP17L5A8MUK1 530 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 EPHB6O15197 1021 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 TNFRSF8P28908 595 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 SPATA4Q8NEY3 305 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 TBC1D22AQ8WUA7 517 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 OSBPL9Q96SU4 736 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 DEF6Q9H4E7 631 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 MMRN2Q9H8L6 949 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 VAT1LQ9HCJ6 419 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 TMEM260Q9NX78 707 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 MTMR4Q9NYA4 1195 aa18.5■□□□□ 0.55
LIMS2-208ENST00000410011 FEZ2Q9UHY8 353 aaPredicted RBP18.5■□□□□ 0.55
LIMS2-208ENST00000410011 SLC37A4O43826 429 aa18.49■□□□□ 0.55
LIMS2-208ENST00000410011 AKR1B10O60218 316 aa18.49■□□□□ 0.55
LIMS2-208ENST00000410011 FKBP3Q00688 224 aaKnown RBP18.49■□□□□ 0.55
LIMS2-208ENST00000410011 SF3B2Q13435 895 aaKnown RBP18.49■□□□□ 0.55
LIMS2-208ENST00000410011 ZCWPW2Q504Y3 356 aa18.49■□□□□ 0.55
LIMS2-208ENST00000410011 GLE1Q53GS7 698 aaKnown RBP18.49■□□□□ 0.55
LIMS2-208ENST00000410011 HYIQ5T013 277 aa18.49■□□□□ 0.55
LIMS2-208ENST00000410011 PDXDC1Q6P996 788 aa18.49■□□□□ 0.55
LIMS2-208ENST00000410011 DDX12PQ92771 950 aa18.49■□□□□ 0.55
LIMS2-208ENST00000410011 FAM207AQ9NSI2 230 aaPredicted RBP18.49■□□□□ 0.55
LIMS2-208ENST00000410011 LRRC53A6NM62 1247 aa18.49■□□□□ 0.55
LIMS2-208ENST00000410011 AGPSO00116 658 aa18.49■□□□□ 0.55
LIMS2-208ENST00000410011 PHACTR2O75167 634 aa18.49■□□□□ 0.55
LIMS2-208ENST00000410011 CLSTN1O94985 981 aa18.49■□□□□ 0.55
LIMS2-208ENST00000410011 MAGEA1P43355 309 aa18.49■□□□□ 0.55
LIMS2-208ENST00000410011 CERKQ8TCT0 537 aa18.49■□□□□ 0.55
LIMS2-208ENST00000410011 IGKV6D-41A0A0C4DH26 115 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 GNA14O95837 355 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 MYBL2P10244 700 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 CLK2P49760 499 aaKnown RBP18.48■□□□□ 0.55
LIMS2-208ENST00000410011 MARSP56192 900 aaKnown RBP18.48■□□□□ 0.55
LIMS2-208ENST00000410011 GABPAQ06546 454 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 LRRC31Q6UY01 552 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 RRAGAQ7L523 313 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 SNX29Q8TEQ0 813 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 CEP63Q96MT8 703 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 UBA5Q9GZZ9 404 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 TMEM51Q9NW97 253 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 MYO1CO00159 1063 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 GCFC2P16383 781 aaKnown RBP18.48■□□□□ 0.55
LIMS2-208ENST00000410011 C2orf54Q08AI8 447 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 HGSNATQ68CP4 663 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 DYMQ7RTS9 669 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 MYOCDQ8IZQ8 938 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 DNAJC19Q96DA6 116 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 NAP1L4Q99733 375 aaKnown RBP18.48■□□□□ 0.55
LIMS2-208ENST00000410011 RNF216Q9NWF9 866 aaPredicted RBP18.48■□□□□ 0.55
LIMS2-208ENST00000410011 CEP72Q9P209 647 aa18.48■□□□□ 0.55
LIMS2-208ENST00000410011 PNMA6FA0A0J9YX94 578 aa18.47■□□□□ 0.55
LIMS2-208ENST00000410011 SHOX2O60902 331 aaPredicted RBP18.47■□□□□ 0.55
LIMS2-208ENST00000410011 TDP2O95551 362 aa18.47■□□□□ 0.55
LIMS2-208ENST00000410011 GGCXP38435 758 aa18.47■□□□□ 0.55
LIMS2-208ENST00000410011 GPSM2P81274 684 aa18.47■□□□□ 0.55
LIMS2-208ENST00000410011 KCNMA1Q12791 1236 aa18.47■□□□□ 0.55
LIMS2-208ENST00000410011 FAM98CQ17RN3 349 aaKnown RBP18.47■□□□□ 0.55
LIMS2-208ENST00000410011 MLXIPQ9HAP2 919 aa18.47■□□□□ 0.55
LIMS2-208ENST00000410011 PODXL2Q9NZ53 605 aa18.47■□□□□ 0.55
LIMS2-208ENST00000410011 CCNL1Q9UK58 526 aaPredicted RBP18.47■□□□□ 0.55
LIMS2-208ENST00000410011 COL4A3BPQ9Y5P4 624 aa18.47■□□□□ 0.55
LIMS2-208ENST00000410011 A0A0U1RQG5 324 aaPredicted RBP18.46■□□□□ 0.55
LIMS2-208ENST00000410011 MOCS3O95396 460 aa18.46■□□□□ 0.55
LIMS2-208ENST00000410011 CRY2Q49AN0 593 aa18.46■□□□□ 0.55
LIMS2-208ENST00000410011 EMBQ6PCB8 327 aa18.46■□□□□ 0.55
LIMS2-208ENST00000410011 SMCR8Q8TEV9 937 aaPredicted RBP18.46■□□□□ 0.55
LIMS2-208ENST00000410011 NOX5Q96PH1 765 aa18.46■□□□□ 0.55
LIMS2-208ENST00000410011 NT5C3AQ9H0P0 336 aa18.46■□□□□ 0.55
LIMS2-208ENST00000410011 RRP15Q9Y3B9 282 aaKnown RBP18.46■□□□□ 0.55
LIMS2-208ENST00000410011 MYO3BQ8WXR4 1341 aa18.46■□□□□ 0.55
LIMS2-208ENST00000410011 NHSQ6T4R5 1651 aa18.46■□□□□ 0.55
LIMS2-208ENST00000410011 PAFAH1B1P43034 410 aa18.46■□□□□ 0.55
LIMS2-208ENST00000410011 VPS72Q15906 364 aa18.46■□□□□ 0.55
LIMS2-208ENST00000410011 CNBD1Q8NA66 436 aa18.46■□□□□ 0.55
LIMS2-208ENST00000410011 NUDT12Q9BQG2 462 aa18.46■□□□□ 0.55
LIMS2-208ENST00000410011 LRRC1Q9BTT6 524 aa18.46■□□□□ 0.55
LIMS2-208ENST00000410011 LUC7LQ9NQ29 371 aaKnown RBP18.46■□□□□ 0.55
LIMS2-208ENST00000410011 SWAP70Q9UH65 585 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms