RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 KRT32Q14532 448 aa20.46■□□□□ 0.87
LSM5-204ENST00000409909 BRDTQ58F21 947 aaPredicted RBP20.46■□□□□ 0.87
LSM5-204ENST00000409909 MFSD5Q6N075 450 aa20.46■□□□□ 0.87
LSM5-204ENST00000409909 APOA5Q6Q788 366 aa20.46■□□□□ 0.87
LSM5-204ENST00000409909 TMTC3Q6ZXV5 915 aa20.46■□□□□ 0.87
LSM5-204ENST00000409909 MICU3Q86XE3 530 aa20.46■□□□□ 0.87
LSM5-204ENST00000409909 CCDC82Q8N4S0 544 aa20.46■□□□□ 0.87
LSM5-204ENST00000409909 AFG1LQ8WV93 481 aa20.46■□□□□ 0.87
LSM5-204ENST00000409909 ZFP91Q96JP5 570 aaPredicted RBP20.46■□□□□ 0.87
LSM5-204ENST00000409909 SCN10AQ9Y5Y9 1956 aa20.46■□□□□ 0.87
LSM5-204ENST00000409909 B4GALT4O60513 344 aa20.45■□□□□ 0.86
LSM5-204ENST00000409909 GH1P01241 217 aa20.45■□□□□ 0.86
LSM5-204ENST00000409909 CPA1P15085 419 aa20.45■□□□□ 0.86
LSM5-204ENST00000409909 HSPA4P34932 840 aa20.45■□□□□ 0.86
LSM5-204ENST00000409909 GPR153Q6NV75 609 aa20.45■□□□□ 0.86
LSM5-204ENST00000409909 PPP1R13LQ8WUF5 828 aa20.45■□□□□ 0.86
LSM5-204ENST00000409909 PPP1R12CQ9BZL4 782 aa20.45■□□□□ 0.86
LSM5-204ENST00000409909 ALDH8A1Q9H2A2 487 aaPredicted RBP20.45■□□□□ 0.86
LSM5-204ENST00000409909 SEC63Q9UGP8 760 aaKnown RBP20.45■□□□□ 0.86
LSM5-204ENST00000409909 SNX14Q9Y5W7 946 aa20.45■□□□□ 0.86
LSM5-204ENST00000409909 MEIS2O14770 477 aa20.44■□□□□ 0.86
LSM5-204ENST00000409909 KPNA6O60684 536 aa20.44■□□□□ 0.86
LSM5-204ENST00000409909 CYP2C18P33260 490 aa20.44■□□□□ 0.86
LSM5-204ENST00000409909 NBPF20Q3BBV1 942 aa20.44■□□□□ 0.86
LSM5-204ENST00000409909 USP17L6PQ6QN14 398 aa20.44■□□□□ 0.86
LSM5-204ENST00000409909 C16orf59Q7L2K0 433 aa20.44■□□□□ 0.86
LSM5-204ENST00000409909 MRVI1Q9Y6F6 885 aa20.44■□□□□ 0.86
LSM5-204ENST00000409909 FRMPD4Q14CM0 1322 aa20.44■□□□□ 0.86
LSM5-204ENST00000409909 MMP3P08254 477 aa20.43■□□□□ 0.86
LSM5-204ENST00000409909 HMGB1P09429 215 aaKnown RBP20.43■□□□□ 0.86
LSM5-204ENST00000409909 CCND2P30279 289 aa20.43■□□□□ 0.86
LSM5-204ENST00000409909 MRPS9P82933 396 aaKnown RBP20.43■□□□□ 0.86
LSM5-204ENST00000409909 SP2Q02086 613 aa20.43■□□□□ 0.86
LSM5-204ENST00000409909 SYNE3Q6ZMZ3 975 aa20.43■□□□□ 0.86
LSM5-204ENST00000409909 Q7L0L9 218 aa20.43■□□□□ 0.86
LSM5-204ENST00000409909 GPKOWQ92917 476 aaPredicted RBP eCLIP20.43■□□□□ 0.86
LSM5-204ENST00000409909 EMID1Q96A84 441 aaPredicted RBP20.43■□□□□ 0.86
LSM5-204ENST00000409909 TRMT13Q9NUP7 481 aaKnown RBP20.43■□□□□ 0.86
LSM5-204ENST00000409909 PPP4R2Q9NY27 417 aa20.43■□□□□ 0.86
LSM5-204ENST00000409909 UMODL1Q5DID0 1318 aa20.43■□□□□ 0.86
LSM5-204ENST00000409909 MYH7BA7E2Y1 1941 aa20.43■□□□□ 0.86
LSM5-204ENST00000409909 PIK3CDO00329 1044 aa20.42■□□□□ 0.86
LSM5-204ENST00000409909 ZBTB43O43298 467 aa20.42■□□□□ 0.86
LSM5-204ENST00000409909 CSF2RAP15509 400 aa20.42■□□□□ 0.86
LSM5-204ENST00000409909 FUT2Q10981 343 aa20.42■□□□□ 0.86
LSM5-204ENST00000409909 KAT2BQ92831 832 aa20.42■□□□□ 0.86
LSM5-204ENST00000409909 JAKMIP1Q96N16 626 aaKnown RBP20.42■□□□□ 0.86
LSM5-204ENST00000409909 NOC4LQ9BVI4 516 aaKnown RBP20.42■□□□□ 0.86
LSM5-204ENST00000409909 HIPK3Q9H422 1215 aa20.42■□□□□ 0.86
LSM5-204ENST00000409909 FAM217BQ9NTX9 383 aaPredicted RBP20.42■□□□□ 0.86
LSM5-204ENST00000409909 KLF18A0A0U1RQI7 1052 aa20.41■□□□□ 0.86
LSM5-204ENST00000409909 LAMC2Q13753 1193 aa20.41■□□□□ 0.86
LSM5-204ENST00000409909 MYSM1Q5VVJ2 828 aa20.41■□□□□ 0.86
LSM5-204ENST00000409909 NFRKBQ6P4R8 1299 aa20.41■□□□□ 0.86
LSM5-204ENST00000409909 DHX37Q8IY37 1157 aaKnown RBP20.41■□□□□ 0.86
LSM5-204ENST00000409909 DEFB123Q8N688 67 aa20.41■□□□□ 0.86
LSM5-204ENST00000409909 SMARCC2Q8TAQ2 1214 aa20.41■□□□□ 0.86
LSM5-204ENST00000409909 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.41■□□□□ 0.86
LSM5-204ENST00000409909 PSTPIP2Q9H939 334 aa20.41■□□□□ 0.86
LSM5-204ENST00000409909 SORBS3O60504 671 aa20.4■□□□□ 0.86
LSM5-204ENST00000409909 REC8O95072 547 aa20.4■□□□□ 0.86
LSM5-204ENST00000409909 CYP2C9P11712 490 aa20.4■□□□□ 0.86
LSM5-204ENST00000409909 PPIGQ13427 754 aaKnown RBP eCLIP20.4■□□□□ 0.863e-8■□□□□ 9.9
LSM5-204ENST00000409909 RTN1Q16799 776 aa20.4■□□□□ 0.86
LSM5-204ENST00000409909 FAM47CQ5HY64 1035 aa20.4■□□□□ 0.86
LSM5-204ENST00000409909 CELF3Q5SZQ8 465 aaKnown RBP20.4■□□□□ 0.86
LSM5-204ENST00000409909 KCNV1Q6PIU1 500 aa20.4■□□□□ 0.86
LSM5-204ENST00000409909 Q6ZUG5 572 aa20.4■□□□□ 0.86
LSM5-204ENST00000409909 TMEM199Q8N511 208 aa20.4■□□□□ 0.86
LSM5-204ENST00000409909 PPTC7Q8NI37 304 aa20.4■□□□□ 0.86
LSM5-204ENST00000409909 CNTNAP5Q8WYK1 1306 aa20.4■□□□□ 0.86
LSM5-204ENST00000409909 CUL5Q93034 780 aa20.4■□□□□ 0.86
LSM5-204ENST00000409909 RNPC3Q96LT9 517 aaKnown RBP20.4■□□□□ 0.86
LSM5-204ENST00000409909 BCAS3Q9H6U6 928 aa20.4■□□□□ 0.86
LSM5-204ENST00000409909 RBM28Q9NW13 759 aaKnown RBP20.4■□□□□ 0.86
LSM5-204ENST00000409909 ACRP10323 421 aa20.39■□□□□ 0.85
LSM5-204ENST00000409909 TGFB3P10600 412 aa20.39■□□□□ 0.85
LSM5-204ENST00000409909 CASTP20810 708 aaKnown RBP20.39■□□□□ 0.85
LSM5-204ENST00000409909 UBA1P22314 1058 aaKnown RBP20.39■□□□□ 0.85
LSM5-204ENST00000409909 CDC27P30260 824 aa20.39■□□□□ 0.85
LSM5-204ENST00000409909 CCL23P55773 120 aa20.39■□□□□ 0.85
LSM5-204ENST00000409909 CHMP4BP1P59074 171 aa20.39■□□□□ 0.85
LSM5-204ENST00000409909 DGKDQ16760 1214 aa20.39■□□□□ 0.85
LSM5-204ENST00000409909 TMEM240Q5SV17 173 aa20.39■□□□□ 0.85
LSM5-204ENST00000409909 ERICH6BQ5W0A0 696 aa20.39■□□□□ 0.85
LSM5-204ENST00000409909 HEATR3Q7Z4Q2 680 aa20.39■□□□□ 0.85
LSM5-204ENST00000409909 INPP4AQ96PE3 977 aaPredicted RBP20.39■□□□□ 0.85
LSM5-204ENST00000409909 WNT8AQ9H1J5 351 aa20.39■□□□□ 0.85
LSM5-204ENST00000409909 RTEL1Q9NZ71 1219 aa20.39■□□□□ 0.85
LSM5-204ENST00000409909 GOLGA8AA7E2F4 631 aa20.38■□□□□ 0.85
LSM5-204ENST00000409909 GOLGA8BA8MQT2 603 aa20.38■□□□□ 0.85
LSM5-204ENST00000409909 GGPS1O95749 300 aa20.38■□□□□ 0.85
LSM5-204ENST00000409909 SUPT20HL2P0C7V6 817 aa20.38■□□□□ 0.85
LSM5-204ENST00000409909 HOXD8P13378 290 aaPredicted RBP20.38■□□□□ 0.85
LSM5-204ENST00000409909 APOBRQ0VD83 1088 aa20.38■□□□□ 0.85
LSM5-204ENST00000409909 SEMA3FQ13275 785 aa20.38■□□□□ 0.85
LSM5-204ENST00000409909 UBE2SQ16763 222 aa20.38■□□□□ 0.85
LSM5-204ENST00000409909 HSDL1Q3SXM5 330 aa20.38■□□□□ 0.85
LSM5-204ENST00000409909 WWC2Q6AWC2 1192 aa20.38■□□□□ 0.85
LSM5-204ENST00000409909 BLOC1S2Q6QNY1 142 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms