RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 TRIM47Q96LD4 638 aa27.6■■■□□ 2.01
DNMT3A-206ENST00000406659 BICDL2A1A5D9 508 aa27.59■■■□□ 2.01
DNMT3A-206ENST00000406659 N4BP3O15049 544 aa27.59■■■□□ 2.01
DNMT3A-206ENST00000406659 CIITAP33076 1130 aa27.59■■■□□ 2.01
DNMT3A-206ENST00000406659 ZNF76P36508 570 aa27.59■■■□□ 2.01
DNMT3A-206ENST00000406659 COPB1P53618 953 aaKnown RBP27.59■■■□□ 2.01
DNMT3A-206ENST00000406659 STK4Q13043 487 aa27.59■■■□□ 2.01
DNMT3A-206ENST00000406659 ECM1Q16610 540 aa27.59■■■□□ 2.01
DNMT3A-206ENST00000406659 KCNK18Q7Z418 384 aa27.59■■■□□ 2.01
DNMT3A-206ENST00000406659 FCHSD1Q86WN1 690 aa27.59■■■□□ 2.01
DNMT3A-206ENST00000406659 ETNPPLQ8TBG4 499 aa27.59■■■□□ 2.01
DNMT3A-206ENST00000406659 THAP9Q9H5L6 903 aa27.59■■■□□ 2.01
DNMT3A-206ENST00000406659 GCOM1H8Y6P7 765 aaPredicted RBP27.58■■■□□ 2.01
DNMT3A-206ENST00000406659 CFBP00751 764 aa27.58■■■□□ 2.01
DNMT3A-206ENST00000406659 POLR2MP0CAP2 368 aa27.58■■■□□ 2.01
DNMT3A-206ENST00000406659 PMS1P54277 932 aaKnown RBP27.58■■■□□ 2.01
DNMT3A-206ENST00000406659 DYMQ7RTS9 669 aa27.58■■■□□ 2.01
DNMT3A-206ENST00000406659 PPFIBP1Q86W92 1011 aa27.58■■■□□ 2.01
DNMT3A-206ENST00000406659 GINM1Q9NU53 330 aa27.58■■■□□ 2.01
DNMT3A-206ENST00000406659 UQCRHLA0A096LP55 91 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 UQCRHP07919 91 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 CYP3A4P08684 503 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 FCER1AP12319 257 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 CCNE1P24864 410 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 PBX1P40424 430 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 PTPN14Q15678 1187 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 COBLL1Q53SF7 1204 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 E4F1Q66K89 784 aaPredicted RBP27.58■■■□□ 2
DNMT3A-206ENST00000406659 P2RX5Q93086 422 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 FAM20AQ96MK3 541 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 VPS16Q9H269 839 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 FBXO28Q9NVF7 368 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 TAB2Q9NYJ8 693 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 HACL1Q9UJ83 578 aa27.58■■■□□ 2
DNMT3A-206ENST00000406659 PSDA5PKW4 1024 aaPredicted RBP27.57■■■□□ 2
DNMT3A-206ENST00000406659 TTI2Q6NXR4 508 aa27.57■■■□□ 2
DNMT3A-206ENST00000406659 TC2NQ8N9U0 490 aa27.57■■■□□ 2
DNMT3A-206ENST00000406659 SRRTQ9BXP5 876 aaKnown RBP27.57■■■□□ 2
DNMT3A-206ENST00000406659 MAGEC2Q9UBF1 373 aaPredicted RBP27.57■■■□□ 2
DNMT3A-206ENST00000406659 FAM86B1E9PN63 330 aa27.56■■■□□ 2
DNMT3A-206ENST00000406659 FAM86B2P0C5J1 330 aa27.56■■■□□ 2
DNMT3A-206ENST00000406659 ADKP55263 362 aaKnown RBP27.56■■■□□ 2
DNMT3A-206ENST00000406659 DDX12PQ92771 950 aa27.56■■■□□ 2
DNMT3A-206ENST00000406659 KIAA1024Q9UPX6 916 aa27.56■■■□□ 2
DNMT3A-206ENST00000406659 ABCB11O95342 1321 aa27.56■■■□□ 2
DNMT3A-206ENST00000406659 ATAD5Q96QE3 1844 aa27.56■■■□□ 2
DNMT3A-206ENST00000406659 AKR1B15C9JRZ8 316 aaPredicted RBP27.55■■■□□ 2
DNMT3A-206ENST00000406659 CTNND1O60716 968 aaKnown RBP27.55■■■□□ 2
DNMT3A-206ENST00000406659 IDEP14735 1019 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 HOXA7P31268 230 aaPredicted RBP27.55■■■□□ 2
DNMT3A-206ENST00000406659 STAT3P40763 770 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 PRELPP51888 382 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 KIF4BQ2VIQ3 1234 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 IRF2BP1Q8IU81 584 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 ERMNQ8TAM6 284 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 LENG9Q96B70 501 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 BAG1Q99933 345 aaPredicted RBP27.55■■■□□ 2
DNMT3A-206ENST00000406659 EHMT1Q9H9B1 1298 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 SLC39A2Q9NP94 309 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 BMP2KQ9NSY1 1161 aaPredicted RBP27.55■■■□□ 2
DNMT3A-206ENST00000406659 STK24Q9Y6E0 443 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 ASTN2O75129 1339 aaPredicted RBP27.55■■■□□ 2
DNMT3A-206ENST00000406659 CCP110O43303 1012 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 EEF1GP26641 437 aaKnown RBP27.55■■■□□ 2
DNMT3A-206ENST00000406659 HAUS3Q68CZ6 603 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 LDHDQ86WU2 507 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 CSGALNACT2Q8N6G5 542 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 MYRIPQ8NFW9 859 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 TBC1D5Q92609 795 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 DEFB129Q9H1M3 183 aa27.55■■■□□ 2
DNMT3A-206ENST00000406659 SSBP05455 408 aaKnown RBP eCLIP27.54■■■□□ 2
DNMT3A-206ENST00000406659 PTGER2P43116 358 aa27.54■■■□□ 2
DNMT3A-206ENST00000406659 PSMD2Q13200 908 aa27.54■■■□□ 2
DNMT3A-206ENST00000406659 CEP135Q66GS9 1140 aa27.54■■■□□ 2
DNMT3A-206ENST00000406659 NCAPH2Q6IBW4 605 aa27.54■■■□□ 2
DNMT3A-206ENST00000406659 NYAP1Q6ZVC0 841 aa27.54■■■□□ 2
DNMT3A-206ENST00000406659 KIAA0895Q8NCT3 520 aa27.54■■■□□ 2
DNMT3A-206ENST00000406659 HPS3Q969F9 1004 aa27.54■■■□□ 2
DNMT3A-206ENST00000406659 DUSP9Q99956 384 aaKnown RBP27.54■■■□□ 2
DNMT3A-206ENST00000406659 SMCHD1A6NHR9 2005 aa27.54■■■□□ 2
DNMT3A-206ENST00000406659 ITIH6Q6UXX5 1313 aa27.54■■■□□ 2
DNMT3A-206ENST00000406659 WDR46O15213 610 aaKnown RBP27.53■■■□□ 2
DNMT3A-206ENST00000406659 ARHGAP6O43182 974 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 INPP5BP32019 993 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 ANKRD40Q6AI12 368 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 LPAR1Q92633 364 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 KIAA1683Q9H0B3 1180 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.53■■■□□ 2
DNMT3A-206ENST00000406659 POTEB3A0JP26 581 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 POTECB2RU33 542 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 MSH4O15457 936 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 STX10O60499 249 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 TPM1P09493 284 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 RBL2Q08999 1139 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 POTEBQ6S5H4 581 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 TMEM139Q8IV31 216 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 PPP1R13BQ96KQ4 1090 aa27.53■■■□□ 2
DNMT3A-206ENST00000406659 E9PMD0 336 aa27.52■■■□□ 2
DNMT3A-206ENST00000406659 PLA2G4BP0C869 781 aa27.52■■■□□ 2
DNMT3A-206ENST00000406659 SPIRE1Q08AE8 756 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms