RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 BAZ2BQ9UIF8 2168 aaKnown RBP18■□□□□ 0.47
LSP1-204ENST00000406638 NFIAQ12857 509 aa18■□□□□ 0.47
LSP1-204ENST00000406638 RCSD1Q6JBY9 416 aa18■□□□□ 0.47
LSP1-204ENST00000406638 ZFPM1Q8IX07 1006 aa18■□□□□ 0.47
LSP1-204ENST00000406638 TBC1D22AQ8WUA7 517 aa18■□□□□ 0.47
LSP1-204ENST00000406638 ZIM3Q96PE6 472 aa18■□□□□ 0.47
LSP1-204ENST00000406638 FOXP1Q9H334 677 aaPredicted RBP18■□□□□ 0.47
LSP1-204ENST00000406638 YDJCA8MPS7 323 aa18■□□□□ 0.47
LSP1-204ENST00000406638 SSBP05455 408 aaKnown RBP eCLIP18■□□□□ 0.47
LSP1-204ENST00000406638 CXCR5P32302 372 aa18■□□□□ 0.47
LSP1-204ENST00000406638 KRT83P78385 493 aa18■□□□□ 0.47
LSP1-204ENST00000406638 CREG2Q8IUH2 290 aa18■□□□□ 0.47
LSP1-204ENST00000406638 CCDC13Q8IYE1 715 aa18■□□□□ 0.47
LSP1-204ENST00000406638 NELFBQ8WX92 580 aa18■□□□□ 0.47
LSP1-204ENST00000406638 CNKSR1Q969H4 720 aa18■□□□□ 0.47
LSP1-204ENST00000406638 VEZTQ9HBM0 779 aa18■□□□□ 0.47
LSP1-204ENST00000406638 EHD2Q9NZN4 543 aa18■□□□□ 0.47
LSP1-204ENST00000406638 CEP131Q9UPN4 1083 aa18■□□□□ 0.47
LSP1-204ENST00000406638 VEGFAP15692 232 aaPredicted RBP17.99■□□□□ 0.47
LSP1-204ENST00000406638 IQCEQ6IPM2 695 aa17.99■□□□□ 0.47
LSP1-204ENST00000406638 CLEC10AQ8IUN9 316 aa17.99■□□□□ 0.47
LSP1-204ENST00000406638 ORC4O43929 436 aa17.99■□□□□ 0.47
LSP1-204ENST00000406638 EPB41P11171 864 aaKnown RBP17.99■□□□□ 0.47
LSP1-204ENST00000406638 PAK1Q13153 545 aa17.99■□□□□ 0.47
LSP1-204ENST00000406638 PREPLQ4J6C6 727 aaPredicted RBP17.99■□□□□ 0.47
LSP1-204ENST00000406638 EHBP1Q8NDI1 1231 aa17.99■□□□□ 0.47
LSP1-204ENST00000406638 ZNF473Q8WTR7 871 aaKnown RBP17.99■□□□□ 0.47
LSP1-204ENST00000406638 EPN3Q9H201 632 aa17.99■□□□□ 0.47
LSP1-204ENST00000406638 IFNAR1P17181 557 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 TROAPQ12815 778 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 CEP85LQ5SZL2 805 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 MICALCLQ6ZW33 695 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 IQCA1Q86XH1 822 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 TRIM22Q8IYM9 498 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 MMGT1Q8N4V1 131 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 SPATA4Q8NEY3 305 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 WASF1Q92558 559 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 DNAJC7Q99615 494 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 MKNK2Q9HBH9 465 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 ZNF277Q9NRM2 450 aaPredicted RBP17.98■□□□□ 0.47
LSP1-204ENST00000406638 AGPAT5Q9NUQ2 364 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 KCNG1Q9UIX4 513 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 PAX7P23759 505 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 HDLBPQ00341 1268 aaKnown RBP17.98■□□□□ 0.47
LSP1-204ENST00000406638 SATB1Q01826 763 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 SPAG1Q07617 926 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 ALS2CLQ60I27 953 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 APOBEC3HQ6NTF7 200 aaKnown RBP17.98■□□□□ 0.47
LSP1-204ENST00000406638 EEF2KMTQ96G04 330 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 EYA3Q99504 573 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 VCPKMTQ9H867 229 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 USP40Q9NVE5 1235 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 RWDD2AQ9UIY3 292 aa17.98■□□□□ 0.47
LSP1-204ENST00000406638 ATXN2Q99700 1313 aaKnown RBP17.98■□□□□ 0.47
LSP1-204ENST00000406638 FRMD3A2A2Y4 597 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 TRIM49BA6NDI0 452 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 WNT7AO00755 349 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 RASSF9O75901 435 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 PDHBP11177 359 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 RASA1P20936 1047 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 SMTNP53814 917 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 EPHB4P54760 987 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 EARS2Q5JPH6 523 aaKnown RBP17.97■□□□□ 0.47
LSP1-204ENST00000406638 DACT2Q5SW24 774 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 CDC42EP5Q6NZY7 148 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 MB21D1Q8N884 522 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 FAM163AQ96GL9 167 aaPredicted RBP17.97■□□□□ 0.47
LSP1-204ENST00000406638 CCT8L2Q96SF2 557 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 SLC40A1Q9NP59 571 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 GDAQ9Y2T3 454 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 SNED1Q8TER0 1413 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 TRIM75PA6NK02 468 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 FAM196BA6NMK8 535 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 PPIP5K2O43314 1243 aa17.97■□□□□ 0.47
LSP1-204ENST00000406638 R3HDM1Q15032 1099 aaKnown RBP17.97■□□□□ 0.47
LSP1-204ENST00000406638 SPATS2Q86XZ4 545 aaKnown RBP17.97■□□□□ 0.47
LSP1-204ENST00000406638 NHEJ1Q9H9Q4 299 aaPredicted RBP17.97■□□□□ 0.47
LSP1-204ENST00000406638 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.97■□□□□ 0.47
LSP1-204ENST00000406638 IPO7O95373 1038 aaKnown RBP17.96■□□□□ 0.47
LSP1-204ENST00000406638 PARP1P09874 1014 aaKnown RBP17.96■□□□□ 0.47
LSP1-204ENST00000406638 CDK8P49336 464 aa17.96■□□□□ 0.47
LSP1-204ENST00000406638 CDR1P51861 262 aa17.96■□□□□ 0.47
LSP1-204ENST00000406638 TCP10Q12799 353 aa17.96■□□□□ 0.47
LSP1-204ENST00000406638 SHROOM1Q2M3G4 852 aaPredicted RBP17.96■□□□□ 0.47
LSP1-204ENST00000406638 IRF2BP1Q8IU81 584 aa17.96■□□□□ 0.47
LSP1-204ENST00000406638 CRACR2BQ8N4Y2 399 aaPredicted RBP17.96■□□□□ 0.47
LSP1-204ENST00000406638 CPVLQ9H3G5 476 aa17.96■□□□□ 0.47
LSP1-204ENST00000406638 SNX12Q9UMY4 172 aa17.96■□□□□ 0.47
LSP1-204ENST00000406638 STK36Q9NRP7 1315 aa17.96■□□□□ 0.47
LSP1-204ENST00000406638 C10orf71Q711Q0 1435 aa17.96■□□□□ 0.47
LSP1-204ENST00000406638 ANO9A1A5B4 782 aa17.96■□□□□ 0.47
LSP1-204ENST00000406638 NEBLO76041 1014 aa17.96■□□□□ 0.47
LSP1-204ENST00000406638 RBM5P52756 815 aaKnown RBP eCLIP17.96■□□□□ 0.47
LSP1-204ENST00000406638 KRT26Q7Z3Y9 468 aa17.96■□□□□ 0.47
LSP1-204ENST00000406638 KIRREL3Q8IZU9 778 aa17.96■□□□□ 0.47
LSP1-204ENST00000406638 CCDC43Q96MW1 224 aaKnown RBP17.96■□□□□ 0.47
LSP1-204ENST00000406638 TACO1Q9BSH4 297 aaKnown RBP17.96■□□□□ 0.47
LSP1-204ENST00000406638 CAPN11Q9UMQ6 739 aa17.96■□□□□ 0.47
LSP1-204ENST00000406638 ECM29Q5VYK3 1845 aa17.95■□□□□ 0.46
LSP1-204ENST00000406638 ZNF233A6NK53 670 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms