RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 MKNK2Q9HBH9 465 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 KLC4Q9NSK0 619 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 GOLGA6L10A6NI86 522 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 EIF4E1BA6NMX2 242 aaKnown RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 PPP1R12BO60237 982 aaPredicted RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 MDH1P40925 334 aaKnown RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 ALS2CLQ60I27 953 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 CCDC121Q6ZUS5 278 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 IQCKQ8N0W5 287 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 PRPF38AQ8NAV1 312 aaKnown RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 N4BP2L2Q92802 583 aaPredicted RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 DHTKD1Q96HY7 919 aaPredicted RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 CDK5RAP3Q96JB5 506 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 PURBQ96QR8 312 aaKnown RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 NUDT12Q9BQG2 462 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 NOVA2Q9UNW9 492 aaKnown RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 TJP1Q07157 1748 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 C1orf167Q5SNV9 1468 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 BAZ2AQ9UIF9 1905 aaKnown RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 BICDL2A1A5D9 508 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 CYTH3O43739 400 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 SKAP2O75563 359 aaPredicted RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 MYCNP04198 464 aaPredicted RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 CDC25CP30307 473 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 CTNNA1P35221 906 aaKnown RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 LLGL1Q15334 1064 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 SLC35G1Q2M3R5 365 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 C3orf67Q6ZVT6 689 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 ZKSCAN4Q969J2 545 aaPredicted RBP10.56□□□□□ -0.72
SMC1B-202ENST00000404354 SUFUQ9UMX1 484 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 TNS3Q68CZ2 1445 aa10.56□□□□□ -0.72
SMC1B-202ENST00000404354 SLIT3O75094 1523 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 MYH7P12883 1935 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 A0A087X0T9 212 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 MYMKA6NI61 221 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 CCDC172P0C7W6 258 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 FAM228BP0C875 321 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 CALM1P0DP23 149 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 CALM2P0DP24 149 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 CALM3P0DP25 149 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 CYP19A1P11511 503 aaPredicted RBP10.55□□□□□ -0.72
SMC1B-202ENST00000404354 PAK2Q13177 524 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 RCSD1Q6JBY9 416 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 CNPY4Q8N129 248 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 LSM14BQ9BX40 385 aaKnown RBP10.55□□□□□ -0.72
SMC1B-202ENST00000404354 SLC40A1Q9NP59 571 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 DCP1AQ9NPI6 582 aaPredicted RBP10.55□□□□□ -0.72
SMC1B-202ENST00000404354 ACTN1P12814 892 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 MECOMQ03112 1051 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 PRPF4BQ13523 1007 aaKnown RBP10.55□□□□□ -0.72
SMC1B-202ENST00000404354 USP17L2Q6R6M4 530 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 FAM114A1Q8IWE2 563 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 ATP6V1G3Q96LB4 118 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 CELF4Q9BZC1 486 aaKnown RBP10.55□□□□□ -0.72
SMC1B-202ENST00000404354 GOPCQ9HD26 462 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 TMEM94Q12767 1356 aa10.55□□□□□ -0.72
SMC1B-202ENST00000404354 DNM1LO00429 736 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 RAD21O60216 631 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 CALML3P27482 149 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 EIF6P56537 245 aaKnown RBP10.54□□□□□ -0.72
SMC1B-202ENST00000404354 ARL6IP4Q66PJ3 421 aaKnown RBP10.54□□□□□ -0.72
SMC1B-202ENST00000404354 KSR1Q8IVT5 923 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 CYFIP2Q96F07 1278 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 NEUROG2Q9H2A3 272 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 IL17RBQ9NRM6 502 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 SIK3Q9Y2K2 1263 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 PKD1L3Q7Z443 1732 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 MARCH6O60337 910 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 TLR2O60603 784 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 ITGA4P13612 1032 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 ERVK-9P63128 1117 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 SWT1Q5T5J6 900 aaKnown RBP10.54□□□□□ -0.72
SMC1B-202ENST00000404354 BANK1Q8NDB2 785 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 FGFBP2Q9BYJ0 223 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 AMACRQ9UHK6 382 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 SMCO2A6NFE2 343 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 DDAH1O94760 285 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 KIF5BP33176 963 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 TRAPPC10P48553 1259 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 SKOR1P84550 965 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 KCNB1Q14721 858 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 CCDC152Q4G0S7 254 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 KCNK18Q7Z418 384 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 CPLX4Q7Z7G2 160 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 RETREG2Q8NC44 543 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 TBCKQ8TEA7 893 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 ERGIC2Q96RQ1 377 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 PYM1Q9BRP8 204 aaKnown RBP10.54□□□□□ -0.72
SMC1B-202ENST00000404354 SLC24A3Q9HC58 644 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 CNOT8Q9UFF9 292 aaKnown RBP10.54□□□□□ -0.72
SMC1B-202ENST00000404354 SPEF2Q9C093 1822 aa10.54□□□□□ -0.72
SMC1B-202ENST00000404354 NPHP3-ACAD11A0A0J9YXS1 232 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 GCOM1H8Y6P7 765 aaPredicted RBP10.53□□□□□ -0.72
SMC1B-202ENST00000404354 DAPK3O43293 454 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 OR52Z1P0C646 297 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 MYZAPP0CAP1 466 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 HSD17B3P37058 310 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 KCNMA1Q12791 1236 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 PPP2R5BQ15173 497 aa10.53□□□□□ -0.72
SMC1B-202ENST00000404354 DIXDC1Q155Q3 683 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms