RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 PDCP20941 246 aa33.5■■■□□ 2.95
USP42-202ENST00000404008 MRPS9P82933 396 aaKnown RBP33.5■■■□□ 2.95
USP42-202ENST00000404008 SPRYD3Q8NCJ5 442 aa33.5■■■□□ 2.95
USP42-202ENST00000404008 ZHX1Q9UKY1 873 aaPredicted RBP33.49■■■□□ 2.95
USP42-202ENST00000404008 H3BQV1 296 aa33.48■■■□□ 2.95
USP42-202ENST00000404008 STAM2O75886 525 aa33.48■■■□□ 2.95
USP42-202ENST00000404008 CCND3P30281 292 aaPredicted RBP33.48■■■□□ 2.95
USP42-202ENST00000404008 ARHGAP4P98171 946 aa33.48■■■□□ 2.95
USP42-202ENST00000404008 IFFO2Q5TF58 517 aa33.48■■■□□ 2.95
USP42-202ENST00000404008 TSHZ2Q9NRE2 1034 aa33.48■■■□□ 2.95
USP42-202ENST00000404008 CCDC194A0A1B0GVG4 234 aa33.47■■■□□ 2.95
USP42-202ENST00000404008 ANP32AP39687 249 aaKnown RBP33.47■■■□□ 2.95
USP42-202ENST00000404008 NONOQ15233 471 aaKnown RBP eCLIP33.47■■■□□ 2.95
USP42-202ENST00000404008 TAPT1Q6NXT6 567 aa33.47■■■□□ 2.95
USP42-202ENST00000404008 ZFP91Q96JP5 570 aaPredicted RBP33.47■■■□□ 2.95
USP42-202ENST00000404008 FOXP1Q9H334 677 aaPredicted RBP33.47■■■□□ 2.95
USP42-202ENST00000404008 HMX1Q9NP08 348 aaPredicted RBP33.47■■■□□ 2.95
USP42-202ENST00000404008 FRMPD3Q5JV73 1810 aa33.47■■■□□ 2.95
USP42-202ENST00000404008 CYP3A4P08684 503 aa33.47■■■□□ 2.95
USP42-202ENST00000404008 MTFR1Q15390 333 aa33.47■■■□□ 2.95
USP42-202ENST00000404008 EARS2Q5JPH6 523 aaKnown RBP33.47■■■□□ 2.95
USP42-202ENST00000404008 PIK3AP1Q6ZUJ8 805 aa33.47■■■□□ 2.95
USP42-202ENST00000404008 TBCKQ8TEA7 893 aa33.47■■■□□ 2.95
USP42-202ENST00000404008 RGS20O76081 388 aa33.46■■■□□ 2.95
USP42-202ENST00000404008 SYT1P21579 422 aa33.46■■■□□ 2.95
USP42-202ENST00000404008 UNC93B1Q9H1C4 597 aa33.46■■■□□ 2.95
USP42-202ENST00000404008 PDGFCQ9NRA1 345 aa33.46■■■□□ 2.95
USP42-202ENST00000404008 RBM47A0AV96 593 aaKnown RBP33.45■■■□□ 2.94
USP42-202ENST00000404008 CCL5P13501 91 aa33.45■■■□□ 2.94
USP42-202ENST00000404008 CCDC144BQ3MJ40 725 aa33.45■■■□□ 2.94
USP42-202ENST00000404008 INPP4AQ96PE3 977 aaPredicted RBP33.45■■■□□ 2.94
USP42-202ENST00000404008 RTEL1Q9NZ71 1219 aa33.45■■■□□ 2.94
USP42-202ENST00000404008 FAM205CA6NFA0 338 aa33.44■■■□□ 2.94
USP42-202ENST00000404008 KIF28PB7ZC32 967 aa33.44■■■□□ 2.94
USP42-202ENST00000404008 SEPT4O43236 478 aa33.44■■■□□ 2.94
USP42-202ENST00000404008 EDIL3O43854 480 aa33.44■■■□□ 2.94
USP42-202ENST00000404008 MYCP01106 439 aaPredicted RBP33.44■■■□□ 2.94
USP42-202ENST00000404008 U2AF2P26368 475 aaKnown RBP eCLIP33.44■■■□□ 2.943e-6■■■□□ 15.4
USP42-202ENST00000404008 CNGA1P29973 690 aa33.44■■■□□ 2.94
USP42-202ENST00000404008 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.44■■■□□ 2.942e-7■■■■□ 23.4
USP42-202ENST00000404008 UBIAD1Q9Y5Z9 338 aa33.44■■■□□ 2.94
USP42-202ENST00000404008 USP11P51784 963 aa33.43■■■□□ 2.94
USP42-202ENST00000404008 GNL2Q13823 731 aaKnown RBP33.43■■■□□ 2.94
USP42-202ENST00000404008 INF2Q27J81 1249 aa33.43■■■□□ 2.94
USP42-202ENST00000404008 SEPT14Q6ZU15 432 aa33.43■■■□□ 2.94
USP42-202ENST00000404008 SCFD2Q8WU76 684 aa33.43■■■□□ 2.94
USP42-202ENST00000404008 PAK6Q9NQU5 681 aaPredicted RBP33.43■■■□□ 2.94
USP42-202ENST00000404008 FAM184BQ9ULE4 1060 aa33.43■■■□□ 2.94
USP42-202ENST00000404008 AKR1A1P14550 325 aa33.42■■■□□ 2.94
USP42-202ENST00000404008 ITGB5P18084 799 aa33.42■■■□□ 2.94
USP42-202ENST00000404008 ADCYAP1R1P41586 468 aa33.42■■■□□ 2.94
USP42-202ENST00000404008 GNPTABQ3T906 1256 aa33.42■■■□□ 2.94
USP42-202ENST00000404008 NOSTRINQ8IVI9 506 aa33.42■■■□□ 2.94
USP42-202ENST00000404008 VPS37CA5D8V6 355 aaPredicted RBP33.41■■■□□ 2.94
USP42-202ENST00000404008 ADCY6O43306 1168 aa33.41■■■□□ 2.94
USP42-202ENST00000404008 CEP55Q53EZ4 464 aa33.41■■■□□ 2.94
USP42-202ENST00000404008 MCTP1Q6DN14 999 aa33.41■■■□□ 2.94
USP42-202ENST00000404008 IQSEC1Q6DN90 963 aa33.41■■■□□ 2.94
USP42-202ENST00000404008 MXRA8Q9BRK3 442 aa33.41■■■□□ 2.94
USP42-202ENST00000404008 RNF208Q9H0X6 261 aa33.41■■■□□ 2.94
USP42-202ENST00000404008 RBM19Q9Y4C8 960 aaKnown RBP33.41■■■□□ 2.94
USP42-202ENST00000404008 C11orf97A0A1B0GVM6 126 aaPredicted RBP33.4■■■□□ 2.94
USP42-202ENST00000404008 FAM86B1E9PN63 330 aa33.4■■■□□ 2.94
USP42-202ENST00000404008 FAM86B2P0C5J1 330 aa33.4■■■□□ 2.94
USP42-202ENST00000404008 CIITAP33076 1130 aa33.4■■■□□ 2.94
USP42-202ENST00000404008 ZNF76P36508 570 aa33.4■■■□□ 2.94
USP42-202ENST00000404008 CYP2W1Q8TAV3 490 aa33.4■■■□□ 2.94
USP42-202ENST00000404008 WDR11Q9BZH6 1224 aa33.4■■■□□ 2.94
USP42-202ENST00000404008 JADE2Q9NQC1 790 aa33.4■■■□□ 2.94
USP42-202ENST00000404008 DDX20Q9UHI6 824 aaKnown RBP33.4■■■□□ 2.94
USP42-202ENST00000404008 STX6O43752 255 aa33.39■■■□□ 2.94
USP42-202ENST00000404008 ICAM3P32942 547 aa33.39■■■□□ 2.94
USP42-202ENST00000404008 TNFAIP2Q03169 654 aa33.39■■■□□ 2.94
USP42-202ENST00000404008 NEK8Q86SG6 692 aa33.39■■■□□ 2.94
USP42-202ENST00000404008 NLRX1Q86UT6 975 aa33.39■■■□□ 2.94
USP42-202ENST00000404008 GPRASP2Q96D09 838 aa33.39■■■□□ 2.94
USP42-202ENST00000404008 IGLV3-22A0A075B6J6 115 aa33.38■■■□□ 2.93
USP42-202ENST00000404008 SPATA31C2B4DYI2 1134 aa33.38■■■□□ 2.93
USP42-202ENST00000404008 ARIH2O95376 493 aa33.38■■■□□ 2.93
USP42-202ENST00000404008 TTLL4Q14679 1199 aa33.38■■■□□ 2.93
USP42-202ENST00000404008 TMEM63BQ5T3F8 832 aa33.38■■■□□ 2.93
USP42-202ENST00000404008 CCDC62Q6P9F0 684 aa33.38■■■□□ 2.93
USP42-202ENST00000404008 KCNV1Q6PIU1 500 aa33.38■■■□□ 2.93
USP42-202ENST00000404008 NIPA1Q7RTP0 329 aa33.38■■■□□ 2.93
USP42-202ENST00000404008 MTMR6Q9Y217 621 aa33.38■■■□□ 2.93
USP42-202ENST00000404008 MRVI1Q9Y6F6 885 aa33.38■■■□□ 2.93
USP42-202ENST00000404008 MEIS1O00470 390 aa33.37■■■□□ 2.93
USP42-202ENST00000404008 FIBPO43427 364 aa33.37■■■□□ 2.93
USP42-202ENST00000404008 MSCO60682 206 aa33.37■■■□□ 2.93
USP42-202ENST00000404008 SMPD1P17405 629 aa33.37■■■□□ 2.93
USP42-202ENST00000404008 SEMA3FQ13275 785 aa33.37■■■□□ 2.93
USP42-202ENST00000404008 MTMR1Q13613 665 aa33.37■■■□□ 2.93
USP42-202ENST00000404008 LENG1Q96BZ8 264 aaPredicted RBP33.37■■■□□ 2.93
USP42-202ENST00000404008 DOCK5Q9H7D0 1870 aa33.37■■■□□ 2.93
USP42-202ENST00000404008 CYP3A7-CYP3A51PA0A087WV96 503 aa33.36■■■□□ 2.93
USP42-202ENST00000404008 TXNP10599 105 aaKnown RBP33.36■■■□□ 2.93
USP42-202ENST00000404008 TGFB3P10600 412 aa33.36■■■□□ 2.93
USP42-202ENST00000404008 CYP3A7P24462 503 aa33.36■■■□□ 2.93
USP42-202ENST00000404008 LETM2Q2VYF4 491 aa33.36■■■□□ 2.93
USP42-202ENST00000404008 DUSP28Q4G0W2 176 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms