RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 C22orf46C9J442 243 aa7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 SDHBP21912 280 aa7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 GRK2P25098 689 aa7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 GRK3P35626 688 aa7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 GTF2A2P52657 109 aa7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 PAK1Q13153 545 aa7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 CBLL1Q75N03 491 aa7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 ZC3H7AQ8IWR0 971 aaKnown RBP7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 ABHD4Q8TB40 342 aa7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 USP33Q8TEY7 942 aa7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 ALG1Q9BT22 464 aa7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 PDLIM7Q9NR12 457 aa7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 ADGRE2Q9UHX3 823 aa7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 COQ6Q9Y2Z9 468 aa7.08□□□□□ -1.28
HMGB3P19-201ENST00000403971 ASLP04424 464 aa7.07□□□□□ -1.28
HMGB3P19-201ENST00000403971 IGFALSP35858 605 aa7.07□□□□□ -1.28
HMGB3P19-201ENST00000403971 CORO7P57737 925 aa7.07□□□□□ -1.28
HMGB3P19-201ENST00000403971 CYP4F8P98187 520 aa7.07□□□□□ -1.28
HMGB3P19-201ENST00000403971 TAF7LQ5H9L4 462 aa7.07□□□□□ -1.28
HMGB3P19-201ENST00000403971 THNSL2Q86YJ6 484 aa7.07□□□□□ -1.28
HMGB3P19-201ENST00000403971 LILRA2Q8N149 483 aa7.07□□□□□ -1.28
HMGB3P19-201ENST00000403971 Q8N1Y9 231 aa7.07□□□□□ -1.28
HMGB3P19-201ENST00000403971 RXFP1Q9HBX9 757 aa7.07□□□□□ -1.28
HMGB3P19-201ENST00000403971 INTS7Q9NVH2 962 aaKnown RBP7.07□□□□□ -1.28
HMGB3P19-201ENST00000403971 IFT57Q9NWB7 429 aa7.07□□□□□ -1.28
HMGB3P19-201ENST00000403971 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.07□□□□□ -1.28
HMGB3P19-201ENST00000403971 GSG1L2A8MUP6 293 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 H7BY64 318 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 PDE8AO60658 829 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 NTRK1P04629 796 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 CKMP06732 381 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 JMJD7P0C870 316 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 PYGMP11217 842 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 AFMP43652 599 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 RNF187Q5TA31 235 aaPredicted RBP7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 BICRALQ6AI39 1079 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 UBR7Q8N806 425 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 DDX1Q92499 740 aaKnown RBP7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 KIRREL1Q96J84 757 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 SPC25Q9HBM1 224 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 PRKAB1Q9Y478 270 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 X6R8D5 127 aa7.06□□□□□ -1.28
HMGB3P19-201ENST00000403971 A0A1W2PQJ5 194 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 FAM47E-STBD1D6RA91 191 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 KPNA6O60684 536 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 DNAJC6O75061 913 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 COL6A2P12110 1019 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 PNLIPP16233 465 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 NAT1P18440 290 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 DNM2P50570 870 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 SNX17Q15036 470 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 PCBP1Q15365 356 aaKnown RBP eCLIP7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 ZCCHC8Q6NZY4 707 aaKnown RBP7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 Q8N3U1 123 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 IGSF22Q8N9C0 903 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 GPATCH3Q96I76 525 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 CBLCQ9ULV8 474 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 SIT1Q9Y3P8 196 aa7.05□□□□□ -1.28
HMGB3P19-201ENST00000403971 CCDC66A2RUB6 948 aa7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 GLRX3O76003 335 aaKnown RBP7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 GLI4P10075 376 aa7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 NEK4P51957 841 aa7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 PIK3R6Q5UE93 754 aa7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 CDCA2Q69YH5 1023 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 WWC2Q6AWC2 1192 aa7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 NBPF11Q86T75 865 aa7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 ATG4DQ86TL0 474 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 CISD2Q8N5K1 135 aaKnown RBP7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 FBXW5Q969U6 566 aa7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 MTFR1LQ9H019 292 aa7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 TNFRSF12AQ9NP84 129 aa7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 CRTAC1Q9NQ79 661 aa7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 SAMD15Q9P1V8 674 aa7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 COA3Q9Y2R0 106 aaPredicted RBP7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 YBX2Q9Y2T7 364 aaKnown RBP7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 CCDC88BA6NC98 1476 aa7.04□□□□□ -1.28
HMGB3P19-201ENST00000403971 M0R2C6 588 aa7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 WNT9AO14904 365 aa7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 DBHP09172 617 aa7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 STAT3P40763 770 aa7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 SEPT7Q16181 437 aaKnown RBP7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 SKOR2Q2VWA4 1001 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 CFAP100Q494V2 611 aa7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 ADGRF1Q5T601 910 aa7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 PKN3Q6P5Z2 889 aa7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 RNF180Q86T96 592 aa7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 PIP4K2CQ8TBX8 421 aa7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 FAM126AQ9BYI3 521 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 CATSPERZQ9NTU4 200 aa7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 HCFC2Q9Y5Z7 792 aa7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 PRDM2Q13029 1718 aa7.03□□□□□ -1.28
HMGB3P19-201ENST00000403971 TCRBV5S4A2TA0A5A2 114 aa7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 ZC3H12DA2A288 527 aaKnown RBP7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 NUDT19A8MXV4 375 aa7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 NKRFO15226 690 aaKnown RBP eCLIP7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 PAPLNO95428 1278 aa7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 VIL1P09327 827 aaKnown RBP7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 GNAT1P11488 350 aa7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 ARL4AP40617 200 aa7.02□□□□□ -1.29
HMGB3P19-201ENST00000403971 ST5P78524 1137 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms