RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 NHLH1Q02575 133 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 PWP2Q15269 919 aaKnown RBP14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 LY6KQ17RY6 165 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 PTCRAQ6ISU1 281 aaPredicted RBP14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 CNKSR3Q6P9H4 555 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 POTEBQ6S5H4 581 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 RNF207Q6ZRF8 634 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 SESTD1Q86VW0 696 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 PI4K2BQ8TCG2 481 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 NEK9Q8TD19 979 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 SCFD2Q8WU76 684 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 FBXL18Q96ME1 805 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 TMEM47Q9BQJ4 181 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 NAPBQ9H115 298 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 COL20A1Q9P218 1284 aa14.06□□□□□ -0.16
SPTLC1P3-201ENST00000403408 KIAA1217Q5T5P2 1943 aa14.05□□□□□ -0.16
SPTLC1P3-201ENST00000403408 H3BQ06 376 aaPredicted RBP14.05□□□□□ -0.16
SPTLC1P3-201ENST00000403408 NKRFO15226 690 aaKnown RBP eCLIP14.05□□□□□ -0.16
SPTLC1P3-201ENST00000403408 KPNA6O60684 536 aa14.05□□□□□ -0.16
SPTLC1P3-201ENST00000403408 FGRP09769 529 aa14.05□□□□□ -0.16
SPTLC1P3-201ENST00000403408 PDE4DQ08499 809 aa14.05□□□□□ -0.16
SPTLC1P3-201ENST00000403408 LRRFIP1Q32MZ4 808 aaKnown RBP14.05□□□□□ -0.16
SPTLC1P3-201ENST00000403408 CAGE1Q8TC20 777 aa14.05□□□□□ -0.16
SPTLC1P3-201ENST00000403408 ZBED2Q9BTP6 218 aa14.05□□□□□ -0.16
SPTLC1P3-201ENST00000403408 CPVLQ9H3G5 476 aa14.05□□□□□ -0.16
SPTLC1P3-201ENST00000403408 HDAC6Q9UBN7 1215 aa14.05□□□□□ -0.16
SPTLC1P3-201ENST00000403408 MYH7BA7E2Y1 1941 aa14.05□□□□□ -0.16
SPTLC1P3-201ENST00000403408 RANBP6O60518 1105 aaKnown RBP14.04□□□□□ -0.16
SPTLC1P3-201ENST00000403408 PDHBP11177 359 aa14.04□□□□□ -0.16
SPTLC1P3-201ENST00000403408 ZNF618Q5T7W0 954 aa14.04□□□□□ -0.16
SPTLC1P3-201ENST00000403408 UIMC1Q96RL1 719 aa14.04□□□□□ -0.16
SPTLC1P3-201ENST00000403408 PHOX2BQ99453 314 aa14.04□□□□□ -0.16
SPTLC1P3-201ENST00000403408 NACAP1Q9BZK3 213 aa14.04□□□□□ -0.16
SPTLC1P3-201ENST00000403408 DCTPP1Q9H773 170 aa14.04□□□□□ -0.16
SPTLC1P3-201ENST00000403408 GTF2IRD1Q9UHL9 959 aa14.04□□□□□ -0.16
SPTLC1P3-201ENST00000403408 ANAPC4Q9UJX5 808 aa14.04□□□□□ -0.16
SPTLC1P3-201ENST00000403408 NOD1Q9Y239 953 aa14.04□□□□□ -0.16
SPTLC1P3-201ENST00000403408 VPS13AQ96RL7 3174 aa14.04□□□□□ -0.16
SPTLC1P3-201ENST00000403408 ORC4O43929 436 aa14.03□□□□□ -0.16
SPTLC1P3-201ENST00000403408 LGR5O75473 907 aa14.03□□□□□ -0.16
SPTLC1P3-201ENST00000403408 SSTR3P32745 418 aaPredicted RBP14.03□□□□□ -0.16
SPTLC1P3-201ENST00000403408 HTRA4P83105 476 aaPredicted RBP14.03□□□□□ -0.16
SPTLC1P3-201ENST00000403408 COL19A1Q14993 1142 aa14.03□□□□□ -0.16
SPTLC1P3-201ENST00000403408 DNERQ8NFT8 737 aa14.03□□□□□ -0.16
SPTLC1P3-201ENST00000403408 SP7Q8TDD2 431 aaPredicted RBP14.03□□□□□ -0.16
SPTLC1P3-201ENST00000403408 TAAR1Q96RJ0 339 aa14.03□□□□□ -0.16
SPTLC1P3-201ENST00000403408 RIF1Q5UIP0 2472 aaKnown RBP14.02□□□□□ -0.16
SPTLC1P3-201ENST00000403408 RAD50Q92878 1312 aa14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 ABHD14A-ACY1A0A1B0GW23 586 aa14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 C19orf67A6NJJ6 358 aa14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 HAS3O00219 553 aa14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 SLC3A2P08195 630 aaKnown RBP14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 SNHG28P0DPA3 235 aa14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 PSEN2P49810 448 aa14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 ZP2Q05996 745 aa14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 ZNF543Q08ER8 600 aa14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 BRDTQ58F21 947 aaPredicted RBP14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 SEPT14Q6ZU15 432 aa14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 CHST3Q7LGC8 479 aa14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 ALG1Q9BT22 464 aa14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 PTPRZ1P23471 2315 aaPredicted RBP14.02□□□□□ -0.17
SPTLC1P3-201ENST00000403408 WDR19Q8NEZ3 1342 aa14.01□□□□□ -0.17
SPTLC1P3-201ENST00000403408 ZNF286BP0CG31 522 aa14.01□□□□□ -0.17
SPTLC1P3-201ENST00000403408 TOP1P11387 765 aaKnown RBP14.01□□□□□ -0.17
SPTLC1P3-201ENST00000403408 MS4A1P11836 297 aa14.01□□□□□ -0.17
SPTLC1P3-201ENST00000403408 LTBRP36941 435 aa14.01□□□□□ -0.17
SPTLC1P3-201ENST00000403408 TCEAL5Q5H9L2 206 aa14.01□□□□□ -0.17
SPTLC1P3-201ENST00000403408 HFE2Q6ZVN8 426 aa14.01□□□□□ -0.17
SPTLC1P3-201ENST00000403408 FBXO22Q8NEZ5 403 aa14.01□□□□□ -0.17
SPTLC1P3-201ENST00000403408 DBF4BQ8NFT6 615 aa14.01□□□□□ -0.17
SPTLC1P3-201ENST00000403408 SYTL5Q8TDW5 730 aaPredicted RBP14.01□□□□□ -0.17
SPTLC1P3-201ENST00000403408 MRPL38Q96DV4 380 aaKnown RBP14.01□□□□□ -0.17
SPTLC1P3-201ENST00000403408 DDX41Q9UJV9 622 aaKnown RBP14.01□□□□□ -0.17
SPTLC1P3-201ENST00000403408 NLRC5Q86WI3 1866 aa14.01□□□□□ -0.17
SPTLC1P3-201ENST00000403408 DCXO43602 365 aa14□□□□□ -0.17
SPTLC1P3-201ENST00000403408 GH1P01241 217 aa14□□□□□ -0.17
SPTLC1P3-201ENST00000403408 GOLGA8HP0CJ92 632 aa14□□□□□ -0.17
SPTLC1P3-201ENST00000403408 ALADP13716 330 aa14□□□□□ -0.17
SPTLC1P3-201ENST00000403408 PTK7Q13308 1070 aa14□□□□□ -0.17
SPTLC1P3-201ENST00000403408 USH1GQ495M9 461 aa14□□□□□ -0.17
SPTLC1P3-201ENST00000403408 EPC2Q52LR7 807 aa14□□□□□ -0.17
SPTLC1P3-201ENST00000403408 PPP4R3BQ5MIZ7 849 aa14□□□□□ -0.17
SPTLC1P3-201ENST00000403408 CCDC155Q8N6L0 562 aa14□□□□□ -0.17
SPTLC1P3-201ENST00000403408 FSD1Q9BTV5 496 aa14□□□□□ -0.17
SPTLC1P3-201ENST00000403408 UBA5Q9GZZ9 404 aa14□□□□□ -0.17
SPTLC1P3-201ENST00000403408 TCP11L1Q9NUJ3 509 aa14□□□□□ -0.17
SPTLC1P3-201ENST00000403408 SALL3Q9BXA9 1300 aa13.99□□□□□ -0.17
SPTLC1P3-201ENST00000403408 RGS20O76081 388 aa13.99□□□□□ -0.17
SPTLC1P3-201ENST00000403408 F2P00734 622 aa13.99□□□□□ -0.17
SPTLC1P3-201ENST00000403408 LINC00271P0C7V0 271 aa13.99□□□□□ -0.17
SPTLC1P3-201ENST00000403408 DLX2Q07687 328 aaPredicted RBP13.99□□□□□ -0.17
SPTLC1P3-201ENST00000403408 IKBKEQ14164 716 aa13.99□□□□□ -0.17
SPTLC1P3-201ENST00000403408 MFSD10Q14728 455 aa13.99□□□□□ -0.17
SPTLC1P3-201ENST00000403408 RGS22Q8NE09 1264 aa13.99□□□□□ -0.17
SPTLC1P3-201ENST00000403408 INSL6Q9Y581 213 aa13.99□□□□□ -0.17
SPTLC1P3-201ENST00000403408 DCHS1Q96JQ0 3298 aa13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 H3BNC9 293 aa13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 OPLAHO14841 1288 aa13.98□□□□□ -0.17
SPTLC1P3-201ENST00000403408 SORBS3O60504 671 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms