RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 MYH10P35580 1976 aa18.92■□□□□ 0.62
SNRNP70-202ENST00000401730 STAT3P40763 770 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 ADCY7P51828 1080 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 AMPD3Q01432 767 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 RRP15Q9Y3B9 282 aaKnown RBP18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 POTEB2H3BUK9 544 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 PSMD14O00487 310 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 KIF11P52732 1056 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 CCDC40Q4G0X9 1142 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 C16orf86Q6ZW13 317 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 TTYH3Q9C0H2 523 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 PCDHAC2Q9Y5I4 1007 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 USP17L10C9JJH3 530 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 VWA3BQ502W6 1294 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 LRRC1Q9BTT6 524 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 DDX4Q9NQI0 724 aaKnown RBP18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 DMGDHQ9UI17 866 aaKnown RBP18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 LEMD3Q9Y2U8 911 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 PCDHA13Q9Y5I0 950 aa18.91■□□□□ 0.62
SNRNP70-202ENST00000401730 MEIS1O00470 390 aa18.9■□□□□ 0.62
SNRNP70-202ENST00000401730 RNF40O75150 1001 aa18.9■□□□□ 0.62
SNRNP70-202ENST00000401730 RHBDL3P58872 404 aa18.9■□□□□ 0.62
SNRNP70-202ENST00000401730 KRT79Q5XKE5 535 aa18.9■□□□□ 0.62
SNRNP70-202ENST00000401730 C7orf25Q9BPX7 421 aa18.9■□□□□ 0.62
SNRNP70-202ENST00000401730 COL16A1Q07092 1604 aaPredicted RBP18.9■□□□□ 0.62
SNRNP70-202ENST00000401730 CNTNAP4Q9C0A0 1308 aa18.9■□□□□ 0.62
SNRNP70-202ENST00000401730 SPZ1Q9BXG8 430 aa18.9■□□□□ 0.62
SNRNP70-202ENST00000401730 ZNF287Q9HBT7 754 aa18.9■□□□□ 0.62
SNRNP70-202ENST00000401730 MYO1AQ9UBC5 1043 aa18.9■□□□□ 0.62
SNRNP70-202ENST00000401730 EDIL3O43854 480 aa18.89■□□□□ 0.62
SNRNP70-202ENST00000401730 MAGEA1P43355 309 aa18.89■□□□□ 0.62
SNRNP70-202ENST00000401730 TMEM266Q2M3C6 531 aa18.89■□□□□ 0.62
SNRNP70-202ENST00000401730 GOLPH3Q9H4A6 298 aa18.89■□□□□ 0.62
SNRNP70-202ENST00000401730 BCAS3Q9H6U6 928 aa18.89■□□□□ 0.62
SNRNP70-202ENST00000401730 ESYT3A0FGR9 886 aa18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 GGCXP38435 758 aa18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 BARGINQ6ZT62 677 aa18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 SND1Q7KZF4 910 aaKnown RBP eCLIP18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 FAM114A1Q8IWE2 563 aa18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 DAGLBQ8NCG7 672 aa18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 ANKS1AQ92625 1134 aa18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 LRRC4BQ9NT99 713 aa18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 KIAA1024Q9UPX6 916 aa18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 IRS2Q9Y4H2 1338 aa18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 PPP1R11O60927 126 aaPredicted RBP18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 SLC1A4P43007 532 aa18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 CCDC181Q5TID7 509 aa18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 ADGRF4Q8IZF3 695 aa18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 HNRNPLLQ8WVV9 542 aaKnown RBP18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 DAGLAQ9Y4D2 1042 aa18.89■□□□□ 0.61
SNRNP70-202ENST00000401730 ROBO1Q9Y6N7 1651 aa18.88■□□□□ 0.61
SNRNP70-202ENST00000401730 KRT18P05783 430 aaKnown RBP18.88■□□□□ 0.61
SNRNP70-202ENST00000401730 PRPHP41219 470 aa18.88■□□□□ 0.61
SNRNP70-202ENST00000401730 PPP4CP60510 307 aa18.88■□□□□ 0.61
SNRNP70-202ENST00000401730 FTCDO95954 541 aa18.88■□□□□ 0.61
SNRNP70-202ENST00000401730 VAV2P52735 878 aa18.88■□□□□ 0.61
SNRNP70-202ENST00000401730 POLR2FP61218 127 aaKnown RBP18.88■□□□□ 0.61
SNRNP70-202ENST00000401730 MEA1Q16626 185 aa18.88■□□□□ 0.61
SNRNP70-202ENST00000401730 AK8Q96MA6 479 aa18.88■□□□□ 0.61
SNRNP70-202ENST00000401730 MTMR4Q9NYA4 1195 aa18.88■□□□□ 0.61
SNRNP70-202ENST00000401730 DDX25Q9UHL0 483 aaKnown RBP18.88■□□□□ 0.61
SNRNP70-202ENST00000401730 GPR75-ASB3A0A0A6YYF3 556 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 POTEB3A0JP26 581 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 POTECB2RU33 542 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 EIF3CLB5ME19 914 aaKnown RBP18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 GALNT17Q6IS24 598 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 POTEBQ6S5H4 581 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 ZFPM1Q8IX07 1006 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 EIF3CQ99613 913 aaKnown RBP18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 GBP3Q9H0R5 595 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 EHD4Q9H223 541 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 ZSCAN5CA6NGD5 496 aaPredicted RBP18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 LAD1O00515 517 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 USO1O60763 962 aaKnown RBP18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 SERPINB2P05120 415 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 IRX3P78415 501 aaPredicted RBP18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 IKQ13123 557 aaPredicted RBP18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 ZSCAN29Q8IWY8 852 aaPredicted RBP18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 GOLGA5Q8TBA6 731 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 NUP58Q9BVL2 599 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 JMJD4Q9H9V9 463 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 KCNQ5Q9NR82 932 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 SNED1Q8TER0 1413 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 G3V3G9 751 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 HERC4Q5GLZ8 1057 aaPredicted RBP18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 DCAF8Q5TAQ9 597 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 EXOC4Q96A65 974 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 SELENOOQ9BVL4 669 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 USP40Q9NVE5 1235 aa18.87■□□□□ 0.61
SNRNP70-202ENST00000401730 TACC1O75410 805 aa18.86■□□□□ 0.61
SNRNP70-202ENST00000401730 ACTN2P35609 894 aa18.86■□□□□ 0.61
SNRNP70-202ENST00000401730 RBM5P52756 815 aaKnown RBP eCLIP18.86■□□□□ 0.61
SNRNP70-202ENST00000401730 SLC20A2Q08357 652 aa18.86■□□□□ 0.61
SNRNP70-202ENST00000401730 NFIAQ12857 509 aa18.86■□□□□ 0.61
SNRNP70-202ENST00000401730 RAPGEF1Q13905 1077 aa18.86■□□□□ 0.61
SNRNP70-202ENST00000401730 USH1GQ495M9 461 aa18.86■□□□□ 0.61
SNRNP70-202ENST00000401730 PAPD7Q5XG87 772 aaKnown RBP18.86■□□□□ 0.61
SNRNP70-202ENST00000401730 CENPPQ6IPU0 288 aa18.86■□□□□ 0.61
SNRNP70-202ENST00000401730 SRLQ86TD4 932 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms