RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 PACSIN1Q9BY11 444 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 ZMYND12Q9H0C1 365 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 CENPHQ9H3R5 247 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 SH3GLB2Q9NR46 395 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 PLAGL2Q9UPG8 496 aa11.72□□□□□ -0.53
PPP4R1-203ENST00000400556 ZEB2O60315 1214 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 FAM153BP0C7A2 387 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 LIG3P49916 1009 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 POLR2FP61218 127 aaKnown RBP11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 FAM153CQ494X1 144 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 CCDC40Q4G0X9 1142 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 FAM114A1Q8IWE2 563 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 TRIM58Q8NG06 486 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 FAM153AQ9UHL3 310 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 NFU1Q9UMS0 254 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 JRKLQ9Y4A0 524 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 CARSP49589 748 aaKnown RBP11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 PDCLQ13371 301 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 KRT25Q7Z3Z0 450 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 ERGIC2Q96RQ1 377 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 C7orf25Q9BPX7 421 aa11.71□□□□□ -0.53
PPP4R1-203ENST00000400556 PHLPP1O60346 1717 aa11.71□□□□□ -0.54
PPP4R1-203ENST00000400556 GNGT1P63211 74 aa11.71□□□□□ -0.54
PPP4R1-203ENST00000400556 CCDC70Q6NSX1 233 aa11.71□□□□□ -0.54
PPP4R1-203ENST00000400556 C8orf74Q6P047 294 aa11.71□□□□□ -0.54
PPP4R1-203ENST00000400556 BCAS4Q8TDM0 211 aa11.71□□□□□ -0.54
PPP4R1-203ENST00000400556 FAM107BQ9H098 131 aa11.71□□□□□ -0.54
PPP4R1-203ENST00000400556 FAM184BQ9ULE4 1060 aa11.71□□□□□ -0.54
PPP4R1-203ENST00000400556 GLI1P08151 1106 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 AARSP49588 968 aaKnown RBP eCLIP11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 TUBB4BP68371 445 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 RAPGEF1Q13905 1077 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 TTBK2Q6IQ55 1244 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 KLHL7Q8IXQ5 586 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 MICALL1Q8N3F8 863 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 TLR10Q9BXR5 811 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 BAG3O95817 575 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 AMPD3Q01432 767 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 GUCY2DQ02846 1103 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 EHHADHQ08426 723 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 HAUS3Q68CZ6 603 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 CENPPQ6IPU0 288 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 RUFY1Q96T51 708 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 ADAMTS1Q9UHI8 967 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 SPATA31A1Q5TZJ5 1347 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 E9PMD0 336 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 GNA11P29992 359 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 IRAK1P51617 712 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 CLEC4GQ6UXB4 293 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 AENQ8WTP8 325 aaKnown RBP11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 NOC3LQ8WTT2 800 aaKnown RBP11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 TBC1D5Q92609 795 aa11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 PURBQ96QR8 312 aaKnown RBP11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 LSM14BQ9BX40 385 aaKnown RBP11.7□□□□□ -0.54
PPP4R1-203ENST00000400556 ANO9A1A5B4 782 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 PPFIA4O75335 1185 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 PALMO75781 387 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 TUBBP07437 444 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 TAL1P17542 331 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 KCNMA1Q12791 1236 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 MAN2A1Q16706 1144 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 TPTE2Q6XPS3 522 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 RETREG2Q8NC44 543 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 ALS2CR12Q96Q35 445 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 ANKRD2Q9GZV1 360 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 BCAS3Q9H6U6 928 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 EPB41L5Q9HCM4 733 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 EDIL3O43854 480 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 ACTN1P12814 892 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 PAFAH1B1P43034 410 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 ZSCAN29Q8IWY8 852 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 FAM133AQ8N9E0 248 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 BAP1Q92560 729 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 CCDC43Q96MW1 224 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 KRT12Q99456 494 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 VIPAS39Q9H9C1 493 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 HYOU1Q9Y4L1 999 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 TARSL2A2RTX5 802 aaKnown RBP11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 TLR2O60603 784 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 MCM3P25205 808 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 KLRC1P26715 233 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 PRPHP41219 470 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 TTMPQ5BVD1 217 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 KLHDC7AQ5VTJ3 777 aa11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 SPTY2D1Q68D10 685 aaPredicted RBP11.69□□□□□ -0.54
PPP4R1-203ENST00000400556 TM4SF1P30408 202 aa11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 STAT3P40763 770 aa11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 SNAP25P60880 206 aa11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 SF3A3Q12874 501 aaKnown RBP eCLIP11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 DAGLBQ8NCG7 672 aa11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 AK8Q96MA6 479 aa11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 ZIM3Q96PE6 472 aa11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 CAPS2Q9BXY5 557 aa11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 STIM2Q9P246 746 aa11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 FAM196BA6NMK8 535 aa11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 HEXIM1O94992 359 aaKnown RBP11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 KRT79Q5XKE5 535 aa11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 SLC30A10Q6XR72 485 aa11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 LRRC55Q6ZSA7 311 aa11.68□□□□□ -0.54
PPP4R1-203ENST00000400556 UNC13DQ70J99 1090 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms