RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 CNGA1P29973 690 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 CASP14P31944 242 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 ZNF131P52739 623 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 COPB1P53618 953 aaKnown RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 SNX16P57768 344 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 IFRD2Q12894 506 aaPredicted RBP3.57□□□□□ -1.84
KNL1-202ENST00000399668 TUBB2AQ13885 445 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 UBE2SQ16763 222 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 Q3C1V9 767 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 CYB5R4Q7L1T6 521 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 EEPD1Q7L9B9 569 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 RNF169Q8NCN4 708 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 DEPTORQ8TB45 409 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 RAB3IL1Q8TBN0 382 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 PIGOQ8TEQ8 1089 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 TTC14Q96N46 770 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 TUBB2BQ9BVA1 445 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 CPVLQ9H3G5 476 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.57□□□□□ -1.84
KNL1-202ENST00000399668 GCNT4Q9P109 453 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 PI4KBQ9UBF8 816 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 PCDHA4Q9UN74 947 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 MINPP1Q9UNW1 487 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 AKAP6Q13023 2319 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 ADGRL3Q9HAR2 1447 aa3.57□□□□□ -1.84
KNL1-202ENST00000399668 NDC80O14777 642 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 ATP11AP98196 1134 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 CACNB1Q02641 598 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 MESDQ14696 234 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 GPR162Q16538 588 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 GPATCH4Q5T3I0 446 aaKnown RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 SMIM5Q71RC9 77 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SND1Q7KZF4 910 aaKnown RBP eCLIP3.56□□□□□ -1.84
KNL1-202ENST00000399668 VPS52Q8N1B4 723 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SLC35F6Q8N357 371 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 KRT12Q99456 494 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 NUCKS1Q9H1E3 243 aaKnown RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 STK38LQ9Y2H1 464 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 LAMB4A4D0S4 1761 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 KIF1AQ12756 1690 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 ARHGEF40Q8TER5 1519 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SH2B2O14492 632 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 ZNF500O60304 480 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 CSPG5O95196 566 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SRGAP2CP0DJJ0 459 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 CDK8P49336 464 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 TNFAIP1Q13829 316 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 TOB2Q14106 344 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 KRT81Q14533 505 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SPOUT1Q5T280 376 aaKnown RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 KCTD16Q68DU8 428 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 GALNT17Q6IS24 598 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 RUFY4Q6ZNE9 571 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SULF1Q8IWU6 871 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 LINC00301Q8NCQ3 95 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 CPDO75976 1380 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 ZNF335Q9H4Z2 1342 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 PRDX5P30044 214 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 ETF1P62495 437 aaKnown RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 PAK2Q13177 524 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 GNPTABQ3T906 1256 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 DPY19L2Q6NUT2 758 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 ARFGAP2Q8N6H7 521 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SLC44A5Q8NCS7 719 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 UHMK1Q8TAS1 419 aaKnown RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 LARP4BQ92615 738 aaKnown RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 RIOK1Q9BRS2 568 aaKnown RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 PCIF1Q9H4Z3 704 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 AKT3Q9Y243 479 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 PCDHB4Q9Y5E5 795 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SRPRBQ9Y5M8 271 aaKnown RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 COL4A3BPQ9Y5P4 624 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 RGS16O15492 202 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 GTPBP6O43824 516 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 MAN1A1P33908 653 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 GUCY2DQ02846 1103 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 BRDTQ58F21 947 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 KRT26Q7Z3Y9 468 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 TRIML1Q8N9V2 468 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 LARSQ9P2J5 1176 aaKnown RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 FAM184BQ9ULE4 1060 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 ARHGAP31Q2M1Z3 1444 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 DIP2BQ9P265 1576 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 ERVV-1B6SEH8 477 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 CAPN9O14815 690 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SEMA3EO15041 775 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 STK10O94804 968 aaKnown RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 FKBP3Q00688 224 aaKnown RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 SNX1Q13596 522 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 ARID5BQ14865 1188 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 SETDB1Q15047 1291 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 ZNF658Q5TYW1 1059 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 SDCCAG8Q86SQ7 713 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 ZNF526Q8TF50 670 aaPredicted RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 UBE2Q2Q8WVN8 375 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 MAGOHBQ96A72 148 aaKnown RBP3.56□□□□□ -1.84
KNL1-202ENST00000399668 HOOK2Q96ED9 719 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 CEP95Q96GE4 821 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 MED10Q9BTT4 135 aa3.56□□□□□ -1.84
KNL1-202ENST00000399668 APOL6Q9BWW8 343 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms