RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 THEGQ9P2T0 379 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 EPS15L1Q9UBC2 864 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 GOLGA8CPA6NN73 597 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 AKR1B15C9JRZ8 316 aaPredicted RBP12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 PRPSAP1Q14558 356 aa12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 IPO11Q9UI26 975 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-217ENST00000399641 UBE2HP62256 183 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 NFX1Q12986 1120 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 PDCLQ13371 301 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 SMAD1Q15797 465 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 MIGA2Q7L4E1 593 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 POLR3EQ9NVU0 708 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 COPG1Q9Y678 874 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 BUB1O43683 1085 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 YWHAGP61981 247 aaKnown RBP eCLIP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 SNCBQ16143 134 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 KRT77Q7Z794 578 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 THOC1Q96FV9 657 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 EPAS1Q99814 870 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 ZKSCAN5Q9Y2L8 839 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 RASSF10A6NK89 507 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 TNPO2O14787 897 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 PRPF4O43172 522 aaKnown RBP eCLIP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 E2F6O75461 281 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 ANP32DO95626 131 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 APOA4P06727 396 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 GARSP41250 739 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 BTDP43251 543 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 KLHL24Q6TFL4 600 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 ZNF507Q8TCN5 953 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 IQCDQ96DY2 449 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 DRC3Q9H069 523 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 SEC24BO95487 1268 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 CTNNA1P35221 906 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 KCNQ4P56696 695 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 XAGE2Q96GT9 111 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 NAF1Q96HR8 494 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 EYA1Q99502 592 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 DACT1Q9NYF0 836 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 SEPT9Q9UHD8 586 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 EXOC3O60645 756 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 DNM1Q05193 864 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 SLFN5Q08AF3 891 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 APOBRQ0VD83 1088 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 CC2D1AQ6P1N0 951 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 RNF207Q6ZRF8 634 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 RFX6Q8HWS3 928 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 ENAHQ8N8S7 591 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 MRPS27Q92552 414 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 SNX25Q9H3E2 840 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 MRPL44Q9H9J2 332 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 MED4Q9NPJ6 270 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 CNGB3Q9NQW8 809 aa12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 AFF4Q9UHB7 1163 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-217ENST00000399641 NEMP1O14524 444 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 YY1P25490 414 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 ART3Q13508 389 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 TRIM67Q6ZTA4 783 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 SLC24A3Q9HC58 644 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 TOP2BQ02880 1626 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 F5H423 210 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 PJA2O43164 708 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 PHBP35232 272 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 SPATA5Q8NB90 893 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 CARD6Q9BX69 1037 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 DOLKQ9UPQ8 538 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 TMEM191BP0C7N4 346 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 ELF2Q15723 593 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 SECISBP2LQ93073 1101 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 THRAP3Q9Y2W1 955 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 H7C0C1 242 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 DCTN3O75935 186 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 ATP5OP48047 213 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 GOLGA8DPQ0D2H9 430 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 NMIQ13287 307 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 CUL3Q13618 768 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 POLA2Q14181 598 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 SLC44A4Q53GD3 710 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 RFWD2Q8NHY2 731 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 YY1AP1Q9H869 796 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 PCDHA1Q9Y5I3 950 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 ERVV-2B6SEH9 535 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 TMEM232C9JQI7 657 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 ZKSCAN8Q15776 578 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 PIK3AP1Q6ZUJ8 805 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 FBXO11Q86XK2 927 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 C7orf31Q8N865 590 aa12.05□□□□□ -0.48
CACNA1C-217ENST00000399641 ARHGAP25P42331 645 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 CRKLP46109 303 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 ADCK5Q3MIX3 580 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 ADCK1Q86TW2 530 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 U2AF1L4Q8WU68 220 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 NACC1Q96RE7 527 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 ZFYVE28Q9HCC9 887 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 ARHGEF3Q9NR81 526 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 OGFRQ9NZT2 677 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 CREB3O43889 395 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 TYW1BQ6NUM6 668 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 MIS18BP1Q6P0N0 1132 aa12.04□□□□□ -0.48
CACNA1C-217ENST00000399641 TMC4Q7Z404 712 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms