RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 CLEC11AQ9Y240 323 aa12.22□□□□□ -0.45
LAMA3-203ENST00000399516 SEPT2Q15019 361 aa12.22□□□□□ -0.45
LAMA3-203ENST00000399516 EMBQ6PCB8 327 aa12.22□□□□□ -0.45
LAMA3-203ENST00000399516 APOA5Q6Q788 366 aa12.22□□□□□ -0.45
LAMA3-203ENST00000399516 GLG1Q92896 1179 aa12.22□□□□□ -0.45
LAMA3-203ENST00000399516 KLHL29Q96CT2 875 aa12.22□□□□□ -0.45
LAMA3-203ENST00000399516 ZNF277Q9NRM2 450 aaPredicted RBP12.22□□□□□ -0.45
LAMA3-203ENST00000399516 PCP11498 1178 aaKnown RBP12.22□□□□□ -0.45
LAMA3-203ENST00000399516 CASP2P42575 452 aa12.22□□□□□ -0.45
LAMA3-203ENST00000399516 PDCD2Q16342 344 aaPredicted RBP12.22□□□□□ -0.45
LAMA3-203ENST00000399516 ZMYM1Q5SVZ6 1142 aa12.22□□□□□ -0.45
LAMA3-203ENST00000399516 CYP4F22Q6NT55 531 aa12.22□□□□□ -0.45
LAMA3-203ENST00000399516 AK8Q96MA6 479 aa12.22□□□□□ -0.45
LAMA3-203ENST00000399516 IPO11Q9UI26 975 aaKnown RBP12.22□□□□□ -0.45
LAMA3-203ENST00000399516 PCDHA13Q9Y5I0 950 aa12.22□□□□□ -0.45
LAMA3-203ENST00000399516 LRRC47Q8N1G4 583 aaKnown RBP12.22□□□□□ -0.45
LAMA3-203ENST00000399516 TEKT3Q9BXF9 490 aa12.22□□□□□ -0.45
LAMA3-203ENST00000399516 SLFN14P0C7P3 912 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 POLR2BP30876 1174 aaKnown RBP12.21□□□□□ -0.45
LAMA3-203ENST00000399516 AOC3Q16853 763 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 SLFNL1Q499Z3 407 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 BTG4Q9NY30 223 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 EXOC1LA0A1B0GW35 172 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 RNF8O76064 485 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 NDUFA10O95299 355 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 CPP00450 1065 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 RNF26Q9BY78 433 aaPredicted RBP12.21□□□□□ -0.45
LAMA3-203ENST00000399516 ZMYND12Q9H0C1 365 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 PLAAQ9Y263 795 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 M0QZ92 97 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 MMP1P03956 469 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 MSH2P43246 934 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 E2F4Q16254 413 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 ARMCX5Q6P1M9 558 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 H7C0C1 242 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 MFAP3LO75121 409 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 ATP5OP48047 213 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 BCAMP50895 628 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 ODR4Q5SWX8 454 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 LAMC1P11047 1609 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 KRT1P04264 644 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 MAML1Q92585 1016 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 ABTB1Q969K4 478 aaPredicted RBP12.21□□□□□ -0.45
LAMA3-203ENST00000399516 CCDC127Q96BQ5 260 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 MMS19Q96T76 1030 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 FMO2Q99518 471 aa12.21□□□□□ -0.45
LAMA3-203ENST00000399516 GUCY2CP25092 1073 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 MAPK4P31152 587 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 MAGEA9P43362 315 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 TADA2BQ86TJ2 420 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 LINC00301Q8NCQ3 95 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 GPHNQ9NQX3 736 aaPredicted RBP12.21□□□□□ -0.46
LAMA3-203ENST00000399516 STK17AQ9UEE5 414 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 GAP43P17677 238 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 INPP1P49441 399 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 ITKQ08881 620 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 GRM1Q13255 1194 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 CUL4AQ13619 759 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 UNC5CLQ8IV45 518 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 S100BP04271 92 aaPredicted RBP12.21□□□□□ -0.46
LAMA3-203ENST00000399516 TMED1Q13445 227 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 MAP7D3Q8IWC1 876 aa12.21□□□□□ -0.46
LAMA3-203ENST00000399516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.21□□□□□ -0.46
LAMA3-203ENST00000399516 CAPN9O14815 690 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 NT5C1BQ96P26 610 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 INTUQ9ULD6 942 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 IVNS1ABPQ9Y6Y0 642 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 MYO1CO00159 1063 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 MYO1FO00160 1098 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 PFDN6O15212 129 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 SRGAP2BP0DMP2 458 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 ESRRGP62508 458 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 SNX1Q13596 522 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 TUBB6Q9BUF5 446 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 HNRNPDLO14979 420 aaKnown RBP12.2□□□□□ -0.46
LAMA3-203ENST00000399516 CCDC68Q9H2F9 335 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 NFU1Q9UMS0 254 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 PCDHB4Q9Y5E5 795 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 CIAO1O76071 339 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 TMEM191BP0C7N4 346 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.2□□□□□ -0.46
LAMA3-203ENST00000399516 TBK1Q9UHD2 729 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 HSPA6P17066 643 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 KCNA6P17658 529 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 STX1BP61266 288 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 ZBED6P86452 979 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 GNPTABQ3T906 1256 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 KRT26Q7Z3Y9 468 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 TLR7Q9NYK1 1049 aaKnown RBP12.2□□□□□ -0.46
LAMA3-203ENST00000399516 SAMSN1Q9NSI8 373 aaKnown RBP12.2□□□□□ -0.46
LAMA3-203ENST00000399516 PRDM15P57071 1507 aaPredicted RBP12.2□□□□□ -0.46
LAMA3-203ENST00000399516 TRPA1O75762 1119 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 PLS3P13797 630 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 PTK2Q05397 1052 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 USP40Q9NVE5 1235 aa12.2□□□□□ -0.46
LAMA3-203ENST00000399516 MCF2LO15068 1137 aa12.19□□□□□ -0.46
LAMA3-203ENST00000399516 SORBS3O60504 671 aa12.19□□□□□ -0.46
LAMA3-203ENST00000399516 PIP4K2CQ8TBX8 421 aa12.19□□□□□ -0.46
LAMA3-203ENST00000399516 CHURC1Q8WUH1 139 aa12.19□□□□□ -0.46
LAMA3-203ENST00000399516 ERVK-7P63135 1459 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms