RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 RBL2Q08999 1139 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 ASIC2Q16515 512 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 HORMAD1Q86X24 394 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 PPP4R1Q8TF05 950 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 TBC1D22AQ8WUA7 517 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 TRIM8Q9BZR9 551 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 TRIM39Q9HCM9 518 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 CRCPO75575 148 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 SNX16P57768 344 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 EIF4A1P60842 406 aaKnown RBP10.42□□□□□ -0.74
SMAD9-203ENST00000399275 SLC20A2Q08357 652 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 PPP2R5EQ16537 467 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 TMTC3Q6ZXV5 915 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 LONP2Q86WA8 852 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 FAM186BQ8IYM0 893 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 CCDC124Q96CT7 223 aaKnown RBP10.42□□□□□ -0.74
SMAD9-203ENST00000399275 GSDMAQ96QA5 445 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 ZNF652Q9Y2D9 606 aa10.42□□□□□ -0.74
SMAD9-203ENST00000399275 H0YC42 278 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 ARPC4P59998 168 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 CDH24Q86UP0 819 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 PROCA1Q8NCQ7 364 aaPredicted RBP10.41□□□□□ -0.74
SMAD9-203ENST00000399275 SFI1A8K8P3 1242 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 POLA2Q14181 598 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 PHKBQ93100 1093 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMAD9-203ENST00000399275 UHRF1BP1LA0JNW5 1464 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 SYCE1LA8MT33 242 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 KCNA2P16389 499 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 GNA11P29992 359 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 TRIM16LQ309B1 348 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 DHX40Q8IX18 779 aaKnown RBP10.41□□□□□ -0.74
SMAD9-203ENST00000399275 PGBD1Q96JS3 809 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 BSDC1Q9NW68 430 aaPredicted RBP10.41□□□□□ -0.74
SMAD9-203ENST00000399275 EHD2Q9NZN4 543 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 MAGEB6P1A0A0J9YX57 407 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 KCNA3P22001 575 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 COPB1P53618 953 aaKnown RBP10.41□□□□□ -0.74
SMAD9-203ENST00000399275 DRP2Q13474 957 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 RAPGEF1Q13905 1077 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 GCKRQ14397 625 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 RNF169Q8NCN4 708 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 DDHD1Q8NEL9 900 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 IL17RAQ96F46 866 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 CDC5LQ99459 802 aaKnown RBP10.41□□□□□ -0.74
SMAD9-203ENST00000399275 FAM129AQ9BZQ8 928 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 RNF14Q9UBS8 474 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 CAPN11Q9UMQ6 739 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 UGGT1Q9NYU2 1555 aa10.41□□□□□ -0.74
SMAD9-203ENST00000399275 ATP5HO75947 161 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 NAPAP54920 295 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 ARHGEF25Q86VW2 580 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 CDK12Q9NYV4 1490 aaPredicted RBP10.4□□□□□ -0.74
SMAD9-203ENST00000399275 FBXO9Q9UK97 447 aaPredicted RBP10.4□□□□□ -0.74
SMAD9-203ENST00000399275 NLRP1Q9C000 1473 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 TARSL2A2RTX5 802 aaKnown RBP10.4□□□□□ -0.74
SMAD9-203ENST00000399275 HSPD1P10809 573 aaKnown RBP10.4□□□□□ -0.74
SMAD9-203ENST00000399275 LRPAP1P30533 357 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 KIF11P52732 1056 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 STX1BP61266 288 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 PDE1BQ01064 536 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 TMEM259Q4ZIN3 620 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 RETREG2Q8NC44 543 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 PLBD2Q8NHP8 589 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 HOOK2Q96ED9 719 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 C6orf203Q9P0P8 240 aaPredicted RBP10.4□□□□□ -0.74
SMAD9-203ENST00000399275 GTPBP6O43824 516 aaPredicted RBP10.4□□□□□ -0.74
SMAD9-203ENST00000399275 SFMBT2Q5VUG0 894 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 EGFL6Q8IUX8 553 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 MAGEB6Q8N7X4 407 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 CALML6Q8TD86 181 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 CUL5Q93034 780 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 MRPS26Q9BYN8 205 aaKnown RBP10.4□□□□□ -0.74
SMAD9-203ENST00000399275 FGFR1OP2Q9NVK5 253 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 ZMYND8Q9ULU4 1186 aaPredicted RBP10.4□□□□□ -0.74
SMAD9-203ENST00000399275 IQSEC3Q9UPP2 1182 aaPredicted RBP10.4□□□□□ -0.74
SMAD9-203ENST00000399275 POGZQ7Z3K3 1410 aa10.4□□□□□ -0.74
SMAD9-203ENST00000399275 LDHCP07864 332 aa10.4□□□□□ -0.75
SMAD9-203ENST00000399275 IGBP1P78318 339 aa10.4□□□□□ -0.75
SMAD9-203ENST00000399275 CCZ1BP86790 482 aa10.4□□□□□ -0.75
SMAD9-203ENST00000399275 CCZ1P86791 482 aaPredicted RBP10.4□□□□□ -0.75
SMAD9-203ENST00000399275 ADCK1Q86TW2 530 aa10.4□□□□□ -0.75
SMAD9-203ENST00000399275 MFN1Q8IWA4 741 aa10.4□□□□□ -0.75
SMAD9-203ENST00000399275 ZFYVE19Q96K21 471 aa10.4□□□□□ -0.75
SMAD9-203ENST00000399275 RIOK1Q9BRS2 568 aaKnown RBP10.4□□□□□ -0.75
SMAD9-203ENST00000399275 OLFML3Q9NRN5 406 aa10.4□□□□□ -0.75
SMAD9-203ENST00000399275 SOWAHDA6NJG2 315 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 BAG3O95817 575 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 TIMM10P62072 90 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 PDCLQ13371 301 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 RCN1Q15293 331 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 TYW1BQ6NUM6 668 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 ELMSAN1Q6PJG2 1045 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 MCF2L2Q86YR7 1114 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 SLF2Q8IX21 1173 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 TRAF3IP3Q9Y228 551 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 CARD8Q9Y2G2 431 aa10.39□□□□□ -0.75
SMAD9-203ENST00000399275 GTPBP10A4D1E9 387 aaKnown RBP10.39□□□□□ -0.75
SMAD9-203ENST00000399275 ESRRAP11474 423 aaPredicted RBP10.39□□□□□ -0.75
SMAD9-203ENST00000399275 RPL13P26373 211 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms