RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 SNX19Q92543 992 aa12.59□□□□□ -0.39
HLCS-202ENST00000399120 DSCC1Q9BVC3 393 aa12.59□□□□□ -0.39
HLCS-202ENST00000399120 TRPC5Q9UL62 973 aaPredicted RBP12.59□□□□□ -0.39
HLCS-202ENST00000399120 MCF2P10911 925 aa12.59□□□□□ -0.39
HLCS-202ENST00000399120 TRIM60Q495X7 471 aa12.59□□□□□ -0.39
HLCS-202ENST00000399120 SPATA1Q5VX52 437 aa12.59□□□□□ -0.39
HLCS-202ENST00000399120 ZSCAN10Q96SZ4 725 aaPredicted RBP12.59□□□□□ -0.39
HLCS-202ENST00000399120 SEPT9Q9UHD8 586 aaPredicted RBP12.59□□□□□ -0.39
HLCS-202ENST00000399120 CDV3Q9UKY7 258 aaKnown RBP12.59□□□□□ -0.39
HLCS-202ENST00000399120 INTUQ9ULD6 942 aa12.59□□□□□ -0.39
HLCS-202ENST00000399120 EFCAB14O75071 495 aa12.58□□□□□ -0.39
HLCS-202ENST00000399120 ESRRAP11474 423 aaPredicted RBP12.58□□□□□ -0.39
HLCS-202ENST00000399120 EPHB4P54760 987 aa12.58□□□□□ -0.39
HLCS-202ENST00000399120 POLA2Q14181 598 aa12.58□□□□□ -0.39
HLCS-202ENST00000399120 DCAF15Q66K64 600 aa12.58□□□□□ -0.39
HLCS-202ENST00000399120 GALNT17Q6IS24 598 aa12.58□□□□□ -0.39
HLCS-202ENST00000399120 PPP1R2P3Q6NXS1 205 aa12.58□□□□□ -0.39
HLCS-202ENST00000399120 SZRD1Q7Z422 152 aa12.58□□□□□ -0.39
HLCS-202ENST00000399120 GJA10Q969M2 543 aa12.58□□□□□ -0.39
HLCS-202ENST00000399120 AKT3Q9Y243 479 aa12.58□□□□□ -0.39
HLCS-202ENST00000399120 ATP8A1Q9Y2Q0 1164 aa12.58□□□□□ -0.39
HLCS-202ENST00000399120 GRAMD1BQ3KR37 738 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 KCTD6Q8NC69 237 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 DACH2Q96NX9 599 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 FGFR1OP2Q9NVK5 253 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 MED7O43513 233 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 DYNLT1P63172 113 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 GANCQ8TET4 914 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.58□□□□□ -0.4
HLCS-202ENST00000399120 ETF1P62495 437 aaKnown RBP12.58□□□□□ -0.4
HLCS-202ENST00000399120 DHX38Q92620 1227 aaKnown RBP12.58□□□□□ -0.4
HLCS-202ENST00000399120 TNRQ92752 1358 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 MAGI1Q96QZ7 1491 aaPredicted RBP12.58□□□□□ -0.4
HLCS-202ENST00000399120 IFT140Q96RY7 1462 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 SNAPC4Q5SXM2 1469 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 HNRNPDLO14979 420 aaKnown RBP12.58□□□□□ -0.4
HLCS-202ENST00000399120 PLTPP55058 493 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 EXOC8Q8IYI6 725 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 CACTINQ8WUQ7 758 aaKnown RBP12.58□□□□□ -0.4
HLCS-202ENST00000399120 MAML1Q92585 1016 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 MMTAG2Q9BU76 263 aaKnown RBP12.58□□□□□ -0.4
HLCS-202ENST00000399120 CNOT10Q9H9A5 744 aaKnown RBP12.58□□□□□ -0.4
HLCS-202ENST00000399120 COG4Q9H9E3 785 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 EPB41L5Q9HCM4 733 aa12.58□□□□□ -0.4
HLCS-202ENST00000399120 E2F6O75461 281 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 ESRRBO95718 433 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 ODR4Q5SWX8 454 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 C16orf87Q6PH81 154 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 CNOT6LQ96LI5 555 aaKnown RBP12.57□□□□□ -0.4
HLCS-202ENST00000399120 FAM81BQ96LP2 452 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 GOLGA8SH3BPF8 625 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 DAB2P98082 770 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 KIAA1841Q6NSI8 718 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 ANKRD13CQ8N6S4 541 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 CHCHD3Q9NX63 227 aaKnown RBP12.57□□□□□ -0.4
HLCS-202ENST00000399120 SUN2Q9UH99 717 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 CTNND1O60716 968 aaKnown RBP12.57□□□□□ -0.4
HLCS-202ENST00000399120 NFKBIAP25963 317 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 PTK2BQ14289 1009 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 CAPRIN1Q14444 709 aaKnown RBP12.57□□□□□ -0.4
HLCS-202ENST00000399120 KRT27Q7Z3Y8 459 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 LRRC8AQ8IWT6 810 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 CDCA7Q9BWT1 371 aaPredicted RBP12.57□□□□□ -0.4
HLCS-202ENST00000399120 SEC24BO95487 1268 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 TAC1P20366 129 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 COPB1P53618 953 aaKnown RBP12.57□□□□□ -0.4
HLCS-202ENST00000399120 YY1AP1Q9H869 796 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 SUGT1Q9Y2Z0 365 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 SOS2Q07890 1332 aaPredicted RBP12.57□□□□□ -0.4
HLCS-202ENST00000399120 KCNA4P22459 653 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 GTF2IP78347 998 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 CMTR1Q8N1G2 835 aaKnown RBP12.57□□□□□ -0.4
HLCS-202ENST00000399120 GCNAQ96QF7 691 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 HACD3Q9P035 362 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 TBK1Q9UHD2 729 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 ZNF215Q9UL58 517 aaPredicted RBP12.57□□□□□ -0.4
HLCS-202ENST00000399120 RRP15Q9Y3B9 282 aaKnown RBP12.57□□□□□ -0.4
HLCS-202ENST00000399120 MAP3K1Q13233 1512 aa12.57□□□□□ -0.4
HLCS-202ENST00000399120 WDR91A4D1P6 747 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 SERPINI2O75830 405 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 PSMC2P35998 433 aaKnown RBP12.56□□□□□ -0.4
HLCS-202ENST00000399120 ZNF790Q6PG37 636 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 ARMC9Q7Z3E5 817 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 TMCO5AQ8N6Q1 288 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 RETREG2Q8NC44 543 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 CEP70Q8NHQ1 597 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 FANCLQ9NW38 375 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 WARS2Q9UGM6 360 aaKnown RBP12.56□□□□□ -0.4
HLCS-202ENST00000399120 CERKLQ49MI3 558 aaPredicted RBP12.56□□□□□ -0.4
HLCS-202ENST00000399120 TTLL7Q6ZT98 887 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 NDUFAF2Q8N183 169 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 LRRC47Q8N1G4 583 aaKnown RBP12.56□□□□□ -0.4
HLCS-202ENST00000399120 EXT2Q93063 718 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 PHACTR3Q96KR7 559 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 NACC1Q96RE7 527 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 JPH2Q9BR39 696 aaPredicted RBP12.56□□□□□ -0.4
HLCS-202ENST00000399120 LRRC4Q9HBW1 653 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 ZNF212Q9UDV6 495 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 PTPN23Q9H3S7 1636 aa12.56□□□□□ -0.4
HLCS-202ENST00000399120 YTHDC2Q9H6S0 1430 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms