RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 TXNDC9O14530 226 aa9.09□□□□□ -0.95
SPTLC3-201ENST00000399002 MGEA5O60502 916 aa9.09□□□□□ -0.95
SPTLC3-201ENST00000399002 OSBPP22059 807 aa9.09□□□□□ -0.95
SPTLC3-201ENST00000399002 RBL2Q08999 1139 aa9.09□□□□□ -0.95
SPTLC3-201ENST00000399002 TTLL7Q6ZT98 887 aa9.09□□□□□ -0.95
SPTLC3-201ENST00000399002 MGARPQ8TDB4 240 aa9.09□□□□□ -0.95
SPTLC3-201ENST00000399002 ANGPTL2Q9UKU9 493 aa9.09□□□□□ -0.95
SPTLC3-201ENST00000399002 IPO5O00410 1097 aaKnown RBP9.09□□□□□ -0.96
SPTLC3-201ENST00000399002 PPEF1O14829 653 aaPredicted RBP9.09□□□□□ -0.96
SPTLC3-201ENST00000399002 STX1BP61266 288 aa9.09□□□□□ -0.96
SPTLC3-201ENST00000399002 ZBED6P86452 979 aa9.09□□□□□ -0.96
SPTLC3-201ENST00000399002 KIF23Q02241 960 aaPredicted RBP9.09□□□□□ -0.96
SPTLC3-201ENST00000399002 ZNF579Q8NAF0 562 aaKnown RBP9.09□□□□□ -0.96
SPTLC3-201ENST00000399002 EXOC4Q96A65 974 aa9.09□□□□□ -0.96
SPTLC3-201ENST00000399002 SLC26A4O43511 780 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 ABCB4P21439 1286 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 CAV1Q03135 178 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 LRMPQ12912 555 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 FAM160B2Q86V87 743 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 DDX27Q96GQ7 796 aaKnown RBP9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 UNC13BO14795 1591 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 TESPA1A2RU30 521 aaPredicted RBP9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 PPFIA2O75334 1257 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 CASP14P31944 242 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 ADCY2Q08462 1091 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 BZW1Q7L1Q6 419 aaKnown RBP9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 PCGF5Q86SE9 256 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 IL17REQ8NFR9 667 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 ALDH8A1Q9H2A2 487 aaPredicted RBP9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 INTS9Q9NV88 658 aaKnown RBP9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 STK38LQ9Y2H1 464 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 MCF2LO15068 1137 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 ZBTB24O43167 697 aaPredicted RBP9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 DMTNQ08495 405 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 KIF22Q14807 665 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 LRCH2Q5VUJ6 765 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 METTL23Q86XA0 190 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 RNF168Q8IYW5 571 aaPredicted RBP9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 TTC1Q99614 292 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 PCDHB4Q9Y5E5 795 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 SCINQ9Y6U3 715 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 DEUP1Q05D60 604 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 NR1H3Q13133 447 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 POLA2Q14181 598 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 TMTC3Q6ZXV5 915 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 FAM186BQ8IYM0 893 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 C17orf53Q8N3J3 647 aaPredicted RBP9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 BCAS4Q8TDM0 211 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 MYCBPQ99417 103 aaPredicted RBP9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 EFHD1Q9BUP0 239 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 EIF2AQ9BY44 585 aaKnown RBP9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 SLC39A2Q9NP94 309 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 BAG5Q9UL15 447 aa9.08□□□□□ -0.96
SPTLC3-201ENST00000399002 MYO1FO00160 1098 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 MAPK4P31152 587 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 LIFRP42702 1097 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 CCNA1P78396 465 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 AP3B2Q13367 1082 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 APOA5Q6Q788 366 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 DCAF4Q8WV16 495 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 ADD3Q9UEY8 706 aaKnown RBP9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 ANAPC5Q9UJX4 755 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 NPHP4O75161 1426 aaPredicted RBP9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 LRRD1A4D1F6 860 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 CCDC151A5D8V7 595 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 GTF2IP78347 998 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 RASSF7Q02833 373 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 GUCY2DQ02846 1103 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 C6orf118Q5T5N4 469 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 NXNQ6DKJ4 435 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 RHOT2Q8IXI1 618 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 LINC00301Q8NCQ3 95 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 MORC4Q8TE76 937 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 ZNF577Q9BSK1 485 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 DESI2Q9BSY9 194 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 MXD3Q9BW11 206 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 ZNF215Q9UL58 517 aaPredicted RBP9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 ORC6Q9Y5N6 252 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 GRID2IPA4D2P6 1211 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 IGSF3O75054 1194 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 ATP5HO75947 161 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 CCNE1P24864 410 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 ATG16L1Q676U5 607 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 PROM2Q8N271 834 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 EFCC1Q9HA90 598 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 PALD1Q9ULE6 856 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 ZNF148Q9UQR1 794 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 MED14O60244 1454 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 PLA2R1Q13018 1463 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 CCDC188H7C350 402 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 IFNAR1P17181 557 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 MSH2P43246 934 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 FKBP3Q00688 224 aaKnown RBP9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 SLC35F6Q8N357 371 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 POMGNT1Q8WZA1 660 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 PSMB7Q99436 277 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 SERPINI1Q99574 410 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 DPH5Q9H2P9 285 aa9.07□□□□□ -0.96
SPTLC3-201ENST00000399002 PDE11AQ9HCR9 933 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms